Protein–RNA interactions for Protein: Q7RTT4

SSX8, Protein SSX8, humanhuman

Predictions only

Length 187 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX8Q7RTT4 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
SSX8Q7RTT4 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC19.93■□□□□ 0.78
SSX8Q7RTT4 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC19.93■□□□□ 0.78
SSX8Q7RTT4 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC19.93■□□□□ 0.78
SSX8Q7RTT4 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
SSX8Q7RTT4 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
SSX8Q7RTT4 AL139246.5-201ENST00000606645 996 ntBASIC19.93■□□□□ 0.78
SSX8Q7RTT4 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC19.93■□□□□ 0.78
SSX8Q7RTT4 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC19.93■□□□□ 0.78
SSX8Q7RTT4 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
SSX8Q7RTT4 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
SSX8Q7RTT4 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
SSX8Q7RTT4 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
SSX8Q7RTT4 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC19.93■□□□□ 0.78
SSX8Q7RTT4 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
SSX8Q7RTT4 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
SSX8Q7RTT4 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
SSX8Q7RTT4 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC19.92■□□□□ 0.78
SSX8Q7RTT4 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC19.92■□□□□ 0.78
SSX8Q7RTT4 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
SSX8Q7RTT4 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
SSX8Q7RTT4 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC19.92■□□□□ 0.78
SSX8Q7RTT4 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC19.92■□□□□ 0.78
SSX8Q7RTT4 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
SSX8Q7RTT4 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
SSX8Q7RTT4 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
SSX8Q7RTT4 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
SSX8Q7RTT4 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SSX8Q7RTT4 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC19.91■□□□□ 0.78
SSX8Q7RTT4 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC19.91■□□□□ 0.78
SSX8Q7RTT4 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC19.91■□□□□ 0.78
SSX8Q7RTT4 AC133561.4-201ENST00000566112 224 ntBASIC19.91■□□□□ 0.78
SSX8Q7RTT4 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
SSX8Q7RTT4 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC19.91■□□□□ 0.78
SSX8Q7RTT4 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SSX8Q7RTT4 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SSX8Q7RTT4 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
SSX8Q7RTT4 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SSX8Q7RTT4 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
SSX8Q7RTT4 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC19.9■□□□□ 0.78
SSX8Q7RTT4 MIR4466-201ENST00000606121 54 ntBASIC19.9■□□□□ 0.78
SSX8Q7RTT4 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC19.9■□□□□ 0.78
SSX8Q7RTT4 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
SSX8Q7RTT4 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
SSX8Q7RTT4 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
SSX8Q7RTT4 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC19.89■□□□□ 0.77
SSX8Q7RTT4 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC19.89■□□□□ 0.77
SSX8Q7RTT4 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
SSX8Q7RTT4 QDPR-206ENST00000508623 601 ntTSL 3 BASIC19.89■□□□□ 0.77
SSX8Q7RTT4 GATM-206ENST00000558336 1522 ntTSL 2 BASIC19.89■□□□□ 0.77
SSX8Q7RTT4 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
SSX8Q7RTT4 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
SSX8Q7RTT4 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
SSX8Q7RTT4 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
SSX8Q7RTT4 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
SSX8Q7RTT4 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC19.88■□□□□ 0.77
SSX8Q7RTT4 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
SSX8Q7RTT4 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
SSX8Q7RTT4 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
SSX8Q7RTT4 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
SSX8Q7RTT4 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
SSX8Q7RTT4 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
SSX8Q7RTT4 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
SSX8Q7RTT4 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
SSX8Q7RTT4 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
SSX8Q7RTT4 MTURN-203ENST00000409688 843 ntTSL 2 BASIC19.87■□□□□ 0.77
SSX8Q7RTT4 NALT1-201ENST00000429224 738 ntTSL 5 BASIC19.87■□□□□ 0.77
SSX8Q7RTT4 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC19.87■□□□□ 0.77
SSX8Q7RTT4 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
SSX8Q7RTT4 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC19.87■□□□□ 0.77
SSX8Q7RTT4 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
SSX8Q7RTT4 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
SSX8Q7RTT4 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
SSX8Q7RTT4 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
SSX8Q7RTT4 HLA-L-211ENST00000482052 1765 ntBASIC19.86■□□□□ 0.77
SSX8Q7RTT4 AC019069.1-201ENST00000610008 1333 ntBASIC19.86■□□□□ 0.77
SSX8Q7RTT4 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
SSX8Q7RTT4 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
SSX8Q7RTT4 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
SSX8Q7RTT4 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC19.86■□□□□ 0.77
SSX8Q7RTT4 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC19.86■□□□□ 0.77
SSX8Q7RTT4 SF1-220ENST00000626028 704 ntTSL 2 BASIC19.86■□□□□ 0.77
SSX8Q7RTT4 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
SSX8Q7RTT4 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC19.86■□□□□ 0.77
SSX8Q7RTT4 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC19.86■□□□□ 0.77
SSX8Q7RTT4 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
SSX8Q7RTT4 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC19.85■□□□□ 0.77
SSX8Q7RTT4 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC19.85■□□□□ 0.77
SSX8Q7RTT4 AC142381.3-201ENST00000568208 1670 ntBASIC19.85■□□□□ 0.77
SSX8Q7RTT4 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC19.85■□□□□ 0.77
SSX8Q7RTT4 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC19.85■□□□□ 0.77
SSX8Q7RTT4 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
SSX8Q7RTT4 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC19.85■□□□□ 0.77
SSX8Q7RTT4 AC022211.4-201ENST00000625094 2161 ntBASIC19.84■□□□□ 0.77
SSX8Q7RTT4 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
SSX8Q7RTT4 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
SSX8Q7RTT4 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC19.84■□□□□ 0.77
SSX8Q7RTT4 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
SSX8Q7RTT4 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC19.84■□□□□ 0.77
SSX8Q7RTT4 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC19.84■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 21.7 ms