Protein–RNA interactions for Protein: Q63HN8

RNF213, E3 ubiquitin-protein ligase RNF213, humanhuman

Predictions only

Length 5,207 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF213Q63HN8 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC12.61□□□□□ -0.39
RNF213Q63HN8 MIR6084-201ENST00000622012 110 ntBASIC12.61□□□□□ -0.39
RNF213Q63HN8 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
RNF213Q63HN8 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC12.6□□□□□ -0.39
RNF213Q63HN8 SLC52A2-201ENST00000329994 1896 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
RNF213Q63HN8 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC12.6□□□□□ -0.39
RNF213Q63HN8 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC12.6□□□□□ -0.39
RNF213Q63HN8 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC12.6□□□□□ -0.39
RNF213Q63HN8 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC12.6□□□□□ -0.39
RNF213Q63HN8 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
RNF213Q63HN8 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC12.6□□□□□ -0.39
RNF213Q63HN8 GAL3ST1-205ENST00000406361 1819 ntAPPRIS P1 TSL 2 BASIC12.6□□□□□ -0.39
RNF213Q63HN8 HNRNPAB-202ENST00000358344 1796 ntAPPRIS P4 TSL 1 (best) BASIC12.6□□□□□ -0.39
RNF213Q63HN8 SH3GL3-202ENST00000427482 1806 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
RNF213Q63HN8 AC245100.8-202ENST00000629247 1058 ntBASIC12.6□□□□□ -0.39
RNF213Q63HN8 PDXP-201ENST00000215904 2010 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
RNF213Q63HN8 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC12.59□□□□□ -0.39
RNF213Q63HN8 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
RNF213Q63HN8 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
RNF213Q63HN8 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC12.59□□□□□ -0.39
RNF213Q63HN8 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC12.59□□□□□ -0.39
RNF213Q63HN8 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
RNF213Q63HN8 GRAMD4P2-201ENST00000423297 1097 ntBASIC12.59□□□□□ -0.39
RNF213Q63HN8 FAM201B-201ENST00000458407 597 ntBASIC12.59□□□□□ -0.39
RNF213Q63HN8 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
RNF213Q63HN8 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
RNF213Q63HN8 GXYLT1-201ENST00000280876 1937 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
RNF213Q63HN8 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
RNF213Q63HN8 FTCD-204ENST00000397748 1955 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
RNF213Q63HN8 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
RNF213Q63HN8 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
RNF213Q63HN8 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
RNF213Q63HN8 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
RNF213Q63HN8 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC12.58□□□□□ -0.39
RNF213Q63HN8 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC12.58□□□□□ -0.39
RNF213Q63HN8 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC12.58□□□□□ -0.39
RNF213Q63HN8 ECEL1P3-201ENST00000427961 737 ntBASIC12.58□□□□□ -0.39
RNF213Q63HN8 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC12.58□□□□□ -0.39
RNF213Q63HN8 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC12.58□□□□□ -0.39
RNF213Q63HN8 MPST-208ENST00000628507 698 ntTSL 5 BASIC12.58□□□□□ -0.39
RNF213Q63HN8 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
RNF213Q63HN8 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
RNF213Q63HN8 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
RNF213Q63HN8 SNX3-202ENST00000349379 890 ntTSL 2 BASIC12.58□□□□□ -0.4
RNF213Q63HN8 AC006455.2-201ENST00000429931 906 ntBASIC12.58□□□□□ -0.4
RNF213Q63HN8 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
RNF213Q63HN8 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
RNF213Q63HN8 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
RNF213Q63HN8 STX7-201ENST00000367937 1090 ntTSL 5 BASIC12.58□□□□□ -0.4
RNF213Q63HN8 AC069152.1-201ENST00000438030 544 ntBASIC12.58□□□□□ -0.4
RNF213Q63HN8 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC12.58□□□□□ -0.4
RNF213Q63HN8 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC12.58□□□□□ -0.4
RNF213Q63HN8 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC12.58□□□□□ -0.4
RNF213Q63HN8 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
RNF213Q63HN8 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
RNF213Q63HN8 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
RNF213Q63HN8 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC12.58□□□□□ -0.4
RNF213Q63HN8 RHEB-204ENST00000472642 900 ntTSL 3 BASIC12.58□□□□□ -0.4
RNF213Q63HN8 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC12.57□□□□□ -0.4
RNF213Q63HN8 E2F4-201ENST00000379378 2096 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
RNF213Q63HN8 KRT18P29-201ENST00000397031 1267 ntBASIC12.57□□□□□ -0.4
RNF213Q63HN8 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC12.57□□□□□ -0.4
RNF213Q63HN8 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
RNF213Q63HN8 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC12.57□□□□□ -0.4
RNF213Q63HN8 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
RNF213Q63HN8 FAM210CP-201ENST00000445714 574 ntBASIC12.57□□□□□ -0.4
RNF213Q63HN8 WWOX-218ENST00000627394 894 ntTSL 5 BASIC12.57□□□□□ -0.4
RNF213Q63HN8 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC12.56□□□□□ -0.4
RNF213Q63HN8 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC12.56□□□□□ -0.4
RNF213Q63HN8 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC12.56□□□□□ -0.4
RNF213Q63HN8 AC099791.2-201ENST00000605725 427 ntBASIC12.56□□□□□ -0.4
RNF213Q63HN8 AC010331.1-201ENST00000611423 582 ntBASIC12.56□□□□□ -0.4
RNF213Q63HN8 LDB1-202ENST00000425280 2089 ntTSL 5 BASIC12.56□□□□□ -0.4
RNF213Q63HN8 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
RNF213Q63HN8 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC12.56□□□□□ -0.4
RNF213Q63HN8 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC12.56□□□□□ -0.4
RNF213Q63HN8 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
RNF213Q63HN8 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC12.56□□□□□ -0.4
RNF213Q63HN8 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC12.56□□□□□ -0.4
RNF213Q63HN8 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
RNF213Q63HN8 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC12.56□□□□□ -0.4
RNF213Q63HN8 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC12.56□□□□□ -0.4
RNF213Q63HN8 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
RNF213Q63HN8 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC12.55□□□□□ -0.4
RNF213Q63HN8 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC12.55□□□□□ -0.4
RNF213Q63HN8 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
RNF213Q63HN8 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC12.55□□□□□ -0.4
RNF213Q63HN8 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC12.55□□□□□ -0.4
RNF213Q63HN8 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC12.55□□□□□ -0.4
RNF213Q63HN8 MIR663A-201ENST00000385250 93 ntBASIC12.55□□□□□ -0.4
RNF213Q63HN8 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC12.55□□□□□ -0.4
RNF213Q63HN8 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
RNF213Q63HN8 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
RNF213Q63HN8 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC12.55□□□□□ -0.4
RNF213Q63HN8 CSPG5-205ENST00000610462 2073 ntTSL 5 BASIC12.55□□□□□ -0.4
RNF213Q63HN8 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
RNF213Q63HN8 GPX1P1-201ENST00000388829 606 ntBASIC12.55□□□□□ -0.4
RNF213Q63HN8 HSCB-202ENST00000398941 955 ntTSL 2 BASIC12.55□□□□□ -0.4
RNF213Q63HN8 SLC7A5P2-201ENST00000553010 536 ntBASIC12.55□□□□□ -0.4
RNF213Q63HN8 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 21.5 ms