Protein–RNA interactions for Protein: P40937

RFC5, Replication factor C subunit 5, humanhuman

Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC5P40937 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC25.51■■□□□ 1.67
RFC5P40937 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC25.51■■□□□ 1.67
RFC5P40937 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
RFC5P40937 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC25.51■■□□□ 1.67
RFC5P40937 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC25.51■■□□□ 1.67
RFC5P40937 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC25.51■■□□□ 1.67
RFC5P40937 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC25.51■■□□□ 1.67
RFC5P40937 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC25.51■■□□□ 1.67
RFC5P40937 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC25.51■■□□□ 1.67
RFC5P40937 CD37-213ENST00000598095 1598 ntTSL 2 BASIC25.51■■□□□ 1.67
RFC5P40937 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC25.51■■□□□ 1.67
RFC5P40937 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
RFC5P40937 RPP21-222ENST00000433076 577 ntTSL 2 BASIC25.5■■□□□ 1.67
RFC5P40937 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC25.5■■□□□ 1.67
RFC5P40937 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC25.5■■□□□ 1.67
RFC5P40937 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC25.5■■□□□ 1.67
RFC5P40937 SRR-208ENST00000576848 588 ntTSL 4 BASIC25.5■■□□□ 1.67
RFC5P40937 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC25.5■■□□□ 1.67
RFC5P40937 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC25.49■■□□□ 1.67
RFC5P40937 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC25.49■■□□□ 1.67
RFC5P40937 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
RFC5P40937 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC25.49■■□□□ 1.67
RFC5P40937 AK3-203ENST00000447596 705 ntTSL 2 BASIC25.49■■□□□ 1.67
RFC5P40937 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC25.49■■□□□ 1.67
RFC5P40937 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC25.49■■□□□ 1.67
RFC5P40937 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC25.48■■□□□ 1.67
RFC5P40937 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC25.48■■□□□ 1.67
RFC5P40937 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
RFC5P40937 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
RFC5P40937 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC25.48■■□□□ 1.67
RFC5P40937 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC25.48■■□□□ 1.67
RFC5P40937 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC25.47■■□□□ 1.67
RFC5P40937 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC25.47■■□□□ 1.67
RFC5P40937 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC25.47■■□□□ 1.67
RFC5P40937 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
RFC5P40937 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC25.47■■□□□ 1.67
RFC5P40937 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC25.47■■□□□ 1.67
RFC5P40937 REST-206ENST00000612429 1376 ntTSL 5 BASIC25.46■■□□□ 1.67
RFC5P40937 REST-207ENST00000616975 1370 ntTSL 5 BASIC25.46■■□□□ 1.67
RFC5P40937 AC008406.3-201ENST00000620001 1374 ntBASIC25.46■■□□□ 1.67
RFC5P40937 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC25.46■■□□□ 1.67
RFC5P40937 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
RFC5P40937 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC25.46■■□□□ 1.67
RFC5P40937 AC005703.6-201ENST00000623265 1329 ntBASIC25.46■■□□□ 1.67
RFC5P40937 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC25.46■■□□□ 1.67
RFC5P40937 TRIR-202ENST00000588213 841 ntTSL 3 BASIC25.46■■□□□ 1.67
RFC5P40937 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC25.46■■□□□ 1.67
RFC5P40937 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC25.46■■□□□ 1.67
RFC5P40937 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC25.46■■□□□ 1.67
RFC5P40937 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC25.46■■□□□ 1.67
RFC5P40937 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
RFC5P40937 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC25.45■■□□□ 1.66
RFC5P40937 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC25.45■■□□□ 1.66
RFC5P40937 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.66
RFC5P40937 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC25.45■■□□□ 1.66
RFC5P40937 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC25.45■■□□□ 1.66
RFC5P40937 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC25.45■■□□□ 1.66
RFC5P40937 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC25.45■■□□□ 1.66
RFC5P40937 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC25.45■■□□□ 1.66
RFC5P40937 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC25.44■■□□□ 1.66
RFC5P40937 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
RFC5P40937 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC25.44■■□□□ 1.66
RFC5P40937 AC131281.2-201ENST00000520478 145 ntBASIC25.44■■□□□ 1.66
RFC5P40937 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC25.44■■□□□ 1.66
RFC5P40937 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC25.44■■□□□ 1.66
RFC5P40937 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC25.44■■□□□ 1.66
RFC5P40937 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC25.43■■□□□ 1.66
RFC5P40937 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC25.43■■□□□ 1.66
RFC5P40937 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC25.42■■□□□ 1.66
RFC5P40937 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
RFC5P40937 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC25.42■■□□□ 1.66
RFC5P40937 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC25.42■■□□□ 1.66
RFC5P40937 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC25.42■■□□□ 1.66
RFC5P40937 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC25.42■■□□□ 1.66
RFC5P40937 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC25.42■■□□□ 1.66
RFC5P40937 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
RFC5P40937 EED-207ENST00000528180 1745 ntTSL 5 BASIC25.42■■□□□ 1.66
RFC5P40937 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC25.41■■□□□ 1.66
RFC5P40937 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC25.41■■□□□ 1.66
RFC5P40937 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC25.41■■□□□ 1.66
RFC5P40937 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
RFC5P40937 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC25.41■■□□□ 1.66
RFC5P40937 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC25.41■■□□□ 1.66
RFC5P40937 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC25.41■■□□□ 1.66
RFC5P40937 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
RFC5P40937 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC25.4■■□□□ 1.66
RFC5P40937 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
RFC5P40937 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC25.4■■□□□ 1.66
RFC5P40937 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC25.4■■□□□ 1.66
RFC5P40937 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC25.4■■□□□ 1.66
RFC5P40937 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC25.4■■□□□ 1.66
RFC5P40937 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC25.4■■□□□ 1.66
RFC5P40937 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC25.4■■□□□ 1.66
RFC5P40937 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC25.4■■□□□ 1.66
RFC5P40937 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC25.4■■□□□ 1.66
RFC5P40937 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC25.4■■□□□ 1.66
RFC5P40937 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
RFC5P40937 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC25.4■■□□□ 1.66
RFC5P40937 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC25.4■■□□□ 1.66
RFC5P40937 AL512631.2-201ENST00000604634 923 ntBASIC25.39■■□□□ 1.66
Retrieved 100 of 98,524 protein–RNA pairs in 14.3 ms