Protein–RNA interactions for Protein: P38319

TDP1, Tyrosyl-DNA phosphodiesterase 1, yeastyeast

Predictions only

Length 544 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TDP1P38319 YIL060WYIL060W 435 nt5.48□□□□□ -1.53
TDP1P38319 PHO86YJL117W 936 nt5.48□□□□□ -1.53
TDP1P38319 SUI2YJR007W 915 nt5.48□□□□□ -1.53
TDP1P38319 VPS20YMR077C 666 nt5.48□□□□□ -1.53
TDP1P38319 SUE1YPR151C 621 nt5.48□□□□□ -1.53
TDP1P38319 RGT1YKL038W 3513 nt5.47□□□□□ -1.53
TDP1P38319 ACC1YNR016C 6702 nt5.47□□□□□ -1.53
TDP1P38319 GRX6YDL010W 696 nt5.47□□□□□ -1.53
TDP1P38319 YDL121CYDL121C 450 nt5.47□□□□□ -1.53
TDP1P38319 SHR3YDL212W 633 nt5.47□□□□□ -1.53
TDP1P38319 PIB1YDR313C 861 nt5.47□□□□□ -1.53
TDP1P38319 YFR052C-AYFR052C-A 306 nt5.47□□□□□ -1.53
TDP1P38319 MPM1YJL066C 759 nt5.47□□□□□ -1.53
TDP1P38319 YJR096WYJR096W 849 nt5.47□□□□□ -1.53
TDP1P38319 YLR402WYLR402W 192 nt5.47□□□□□ -1.53
TDP1P38319 TOM40YMR203W 1164 nt5.47□□□□□ -1.53
TDP1P38319 UBA3YPR066W 900 nt5.47□□□□□ -1.53
TDP1P38319 YPR160C-AYPR160C-A 285 nt5.47□□□□□ -1.53
TDP1P38319 MRPS5YBR251W 924 nt5.47□□□□□ -1.53
TDP1P38319 RRN3YKL125W 1884 nt5.47□□□□□ -1.53
TDP1P38319 HFI1YPL254W 1467 nt5.46□□□□□ -1.53
TDP1P38319 RAT1YOR048C 3021 nt5.46□□□□□ -1.53
TDP1P38319 AAP1YHR047C 2571 nt5.46□□□□□ -1.54
TDP1P38319 MRPL6YHR147C 645 nt5.46□□□□□ -1.54
TDP1P38319 THI80YOR143C 960 nt5.46□□□□□ -1.54
TDP1P38319 BRL1YHR036W 1416 nt5.46□□□□□ -1.54
TDP1P38319 HOS1YPR068C 1413 nt5.46□□□□□ -1.54
TDP1P38319 BUL1YMR275C 2931 nt5.46□□□□□ -1.54
TDP1P38319 SET5YHR207C 1581 nt5.46□□□□□ -1.54
TDP1P38319 RBA50YDR527W 1320 nt5.46□□□□□ -1.54
TDP1P38319 YKR015CYKR015C 1707 nt5.45□□□□□ -1.54
TDP1P38319 ATR1YML116W 1629 nt5.45□□□□□ -1.54
TDP1P38319 HEM3YDL205C 984 nt5.45□□□□□ -1.54
TDP1P38319 YDR053WYDR053W 396 nt5.45□□□□□ -1.54
TDP1P38319 COG7YGL005C 840 nt5.45□□□□□ -1.54
TDP1P38319 GEP7YGL057C 864 nt5.45□□□□□ -1.54
TDP1P38319 SPO74YGL170C 1242 nt5.45□□□□□ -1.54
TDP1P38319 FMP48YGR052W 1110 nt5.45□□□□□ -1.54
TDP1P38319 IPI1YHR085W 1005 nt5.45□□□□□ -1.54
TDP1P38319 YLL059CYLL059C 507 nt5.45□□□□□ -1.54
TDP1P38319 YML090WYML090W 387 nt5.45□□□□□ -1.54
TDP1P38319 HOR7YMR251W-A 180 nt5.45□□□□□ -1.54
TDP1P38319 YOR292CYOR292C 930 nt5.45□□□□□ -1.54
TDP1P38319 RRP15YPR143W 753 nt5.45□□□□□ -1.54
TDP1P38319 YME1YPR024W 2244 nt5.45□□□□□ -1.54
TDP1P38319 YEL077CYEL077C 3834 nt5.45□□□□□ -1.54
TDP1P38319 IML2YJL082W 2196 nt5.45□□□□□ -1.54
TDP1P38319 MAD3YJL013C 1548 nt5.44□□□□□ -1.54
TDP1P38319 SKS1YPL026C 1509 nt5.44□□□□□ -1.54
TDP1P38319 NSI1YDR026C 1713 nt5.44□□□□□ -1.54
TDP1P38319 YFT2YDR319C 825 nt5.44□□□□□ -1.54
TDP1P38319 VTC2YFL004W 2487 nt5.44□□□□□ -1.54
TDP1P38319 BUD32YGR262C 786 nt5.44□□□□□ -1.54
TDP1P38319 HYM1YKL189W 1200 nt5.44□□□□□ -1.54
TDP1P38319 YLR118CYLR118C 684 nt5.44□□□□□ -1.54
TDP1P38319 PDH1YPR002W 1551 nt5.44□□□□□ -1.54
TDP1P38319 MET7YOR241W 1647 nt5.44□□□□□ -1.54
TDP1P38319 DXO1YDR370C 1329 nt5.44□□□□□ -1.54
TDP1P38319 BAP2YBR068C 1830 nt5.44□□□□□ -1.54
TDP1P38319 PDC1YLR044C 1692 nt5.43□□□□□ -1.54
TDP1P38319 PCL2YDL127W 927 nt5.43□□□□□ -1.54
TDP1P38319 PSY3YLR376C 729 nt5.43□□□□□ -1.54
TDP1P38319 YML012C-AYML012C-A 378 nt5.43□□□□□ -1.54
TDP1P38319 YIF1YNL263C 945 nt5.43□□□□□ -1.54
TDP1P38319 SFT2YBL102W 648 nt5.43□□□□□ -1.54
TDP1P38319 YPL102CYPL102C 303 nt5.43□□□□□ -1.54
TDP1P38319 YPL113CYPL113C 1191 nt5.43□□□□□ -1.54
TDP1P38319 IDI1YPL117C 867 nt5.43□□□□□ -1.54
TDP1P38319 TIF5YPR041W 1218 nt5.43□□□□□ -1.54
TDP1P38319 YSA1YBR111C 696 nt5.43□□□□□ -1.54
TDP1P38319 RRP14YKL082C 1305 nt5.43□□□□□ -1.54
TDP1P38319 HXT3YDR345C 1704 nt5.43□□□□□ -1.54
TDP1P38319 COR1YBL045C 1374 nt5.42□□□□□ -1.54
TDP1P38319 YNL095CYNL095C 1929 nt5.42□□□□□ -1.54
TDP1P38319 YDL026WYDL026W 312 nt5.42□□□□□ -1.54
TDP1P38319 MID2YLR332W 1131 nt5.42□□□□□ -1.54
TDP1P38319 STE12YHR084W 2067 nt5.42□□□□□ -1.54
TDP1P38319 FAA4YMR246W 2085 nt5.42□□□□□ -1.54
TDP1P38319 ABZ1YNR033W 2364 nt5.42□□□□□ -1.54
TDP1P38319 PRT1YOR361C 2292 nt5.41□□□□□ -1.54
TDP1P38319 OCA4YCR095C 1089 nt5.41□□□□□ -1.54
TDP1P38319 YDL114WYDL114W 927 nt5.41□□□□□ -1.54
TDP1P38319 YDL144CYDL144C 1071 nt5.41□□□□□ -1.54
TDP1P38319 UGX2YDL169C 672 nt5.41□□□□□ -1.54
TDP1P38319 INO2YDR123C 915 nt5.41□□□□□ -1.54
TDP1P38319 YHR112CYHR112C 1137 nt5.41□□□□□ -1.54
TDP1P38319 ARG3YJL088W 1017 nt5.41□□□□□ -1.54
TDP1P38319 AIM23YJL131C 1071 nt5.41□□□□□ -1.54
TDP1P38319 YJL215CYJL215C 360 nt5.41□□□□□ -1.54
TDP1P38319 YKL031WYKL031W 414 nt5.41□□□□□ -1.54
TDP1P38319 YKL169CYKL169C 384 nt5.41□□□□□ -1.54
TDP1P38319 MTR2YKL186C 555 nt5.41□□□□□ -1.54
TDP1P38319 PGA2YNL149C 390 nt5.41□□□□□ -1.54
TDP1P38319 YOR289WYOR289W 756 nt5.41□□□□□ -1.54
TDP1P38319 snR32snR32 188 nt5.41□□□□□ -1.54
TDP1P38319 DUR1,2YBR208C 5508 nt5.41□□□□□ -1.54
TDP1P38319 SPC97YHR172W 2472 nt5.41□□□□□ -1.54
TDP1P38319 UBX2YML013W 1755 nt5.41□□□□□ -1.54
TDP1P38319 PRP9YDL030W 1593 nt5.41□□□□□ -1.54
TDP1P38319 ACF2YLR144C 2340 nt5.41□□□□□ -1.54
Retrieved 100 of 7,029 protein–RNA pairs in 22.2 ms