Protein–RNA interactions for Protein: P31040

SDHA, Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial, humanhuman

Predictions only

Length 664 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDHAP31040 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
SDHAP31040 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
SDHAP31040 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
SDHAP31040 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.89
SDHAP31040 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC20.58■□□□□ 0.89
SDHAP31040 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC20.58■□□□□ 0.89
SDHAP31040 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC20.58■□□□□ 0.89
SDHAP31040 MTX2-204ENST00000443241 799 ntTSL 3 BASIC20.58■□□□□ 0.89
SDHAP31040 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC20.58■□□□□ 0.89
SDHAP31040 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC20.58■□□□□ 0.89
SDHAP31040 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.88
SDHAP31040 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
SDHAP31040 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC20.58■□□□□ 0.88
SDHAP31040 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
SDHAP31040 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC20.58■□□□□ 0.88
SDHAP31040 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
SDHAP31040 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
SDHAP31040 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
SDHAP31040 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
SDHAP31040 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
SDHAP31040 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
SDHAP31040 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
SDHAP31040 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
SDHAP31040 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC20.57■□□□□ 0.88
SDHAP31040 DUX4L18-201ENST00000553347 1267 ntBASIC20.57■□□□□ 0.88
SDHAP31040 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
SDHAP31040 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
SDHAP31040 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC20.57■□□□□ 0.88
SDHAP31040 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
SDHAP31040 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SDHAP31040 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC20.56■□□□□ 0.88
SDHAP31040 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
SDHAP31040 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC20.56■□□□□ 0.88
SDHAP31040 AL022069.1-201ENST00000568025 1636 ntBASIC20.56■□□□□ 0.88
SDHAP31040 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SDHAP31040 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
SDHAP31040 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC20.56■□□□□ 0.88
SDHAP31040 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
SDHAP31040 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
SDHAP31040 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
SDHAP31040 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
SDHAP31040 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC20.55■□□□□ 0.88
SDHAP31040 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
SDHAP31040 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
SDHAP31040 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC20.55■□□□□ 0.88
SDHAP31040 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
SDHAP31040 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC20.54■□□□□ 0.88
SDHAP31040 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC20.54■□□□□ 0.88
SDHAP31040 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SDHAP31040 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC20.54■□□□□ 0.88
SDHAP31040 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SDHAP31040 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
SDHAP31040 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC20.54■□□□□ 0.88
SDHAP31040 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
SDHAP31040 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC20.54■□□□□ 0.88
SDHAP31040 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SDHAP31040 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
SDHAP31040 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
SDHAP31040 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC20.53■□□□□ 0.88
SDHAP31040 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC20.53■□□□□ 0.88
SDHAP31040 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SDHAP31040 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
SDHAP31040 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
SDHAP31040 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
SDHAP31040 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SDHAP31040 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SDHAP31040 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC20.52■□□□□ 0.88
SDHAP31040 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
SDHAP31040 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
SDHAP31040 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
SDHAP31040 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
SDHAP31040 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC20.52■□□□□ 0.88
SDHAP31040 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC20.52■□□□□ 0.88
SDHAP31040 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
SDHAP31040 EI24-213ENST00000618552 1747 ntTSL 5 BASIC20.52■□□□□ 0.88
SDHAP31040 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC20.52■□□□□ 0.88
SDHAP31040 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC20.52■□□□□ 0.87
SDHAP31040 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
SDHAP31040 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC20.51■□□□□ 0.87
SDHAP31040 AC012676.1-201ENST00000574705 1949 ntBASIC20.51■□□□□ 0.87
SDHAP31040 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
SDHAP31040 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
SDHAP31040 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC20.51■□□□□ 0.87
SDHAP31040 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
SDHAP31040 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
SDHAP31040 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
SDHAP31040 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
SDHAP31040 GAK-223ENST00000628912 497 ntTSL 5 BASIC20.51■□□□□ 0.87
SDHAP31040 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
SDHAP31040 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
SDHAP31040 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
SDHAP31040 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC20.51■□□□□ 0.87
SDHAP31040 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
SDHAP31040 AC068473.5-201ENST00000616428 2072 ntBASIC20.5■□□□□ 0.87
SDHAP31040 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
SDHAP31040 NFE2L3P1-201ENST00000588207 1959 ntBASIC20.5■□□□□ 0.87
SDHAP31040 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
SDHAP31040 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
SDHAP31040 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
SDHAP31040 ATP5G2P3-201ENST00000429083 425 ntBASIC20.5■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 53.9 ms