Protein–RNA interactions for Protein: P25067

COL8A2, Collagen alpha-2(VIII) chain, humanhuman

Predictions only

Length 703 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A2P25067 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
COL8A2P25067 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
COL8A2P25067 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC19.45■□□□□ 0.7
COL8A2P25067 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC19.45■□□□□ 0.7
COL8A2P25067 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC19.45■□□□□ 0.7
COL8A2P25067 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
COL8A2P25067 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC19.45■□□□□ 0.7
COL8A2P25067 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
COL8A2P25067 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC19.45■□□□□ 0.7
COL8A2P25067 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC19.45■□□□□ 0.7
COL8A2P25067 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
COL8A2P25067 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
COL8A2P25067 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC19.44■□□□□ 0.7
COL8A2P25067 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
COL8A2P25067 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
COL8A2P25067 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC19.44■□□□□ 0.7
COL8A2P25067 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC19.44■□□□□ 0.7
COL8A2P25067 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
COL8A2P25067 AL136116.3-201ENST00000402907 1138 ntBASIC19.44■□□□□ 0.7
COL8A2P25067 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
COL8A2P25067 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
COL8A2P25067 AC131274.2-201ENST00000580697 1507 ntBASIC19.44■□□□□ 0.7
COL8A2P25067 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC19.44■□□□□ 0.7
COL8A2P25067 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
COL8A2P25067 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
COL8A2P25067 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC19.43■□□□□ 0.7
COL8A2P25067 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
COL8A2P25067 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC19.43■□□□□ 0.7
COL8A2P25067 MIR4466-201ENST00000606121 54 ntBASIC19.43■□□□□ 0.7
COL8A2P25067 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
COL8A2P25067 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC19.43■□□□□ 0.7
COL8A2P25067 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
COL8A2P25067 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
COL8A2P25067 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
COL8A2P25067 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
COL8A2P25067 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
COL8A2P25067 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
COL8A2P25067 QDPR-206ENST00000508623 601 ntTSL 3 BASIC19.42■□□□□ 0.7
COL8A2P25067 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC19.42■□□□□ 0.7
COL8A2P25067 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
COL8A2P25067 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
COL8A2P25067 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
COL8A2P25067 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC19.41■□□□□ 0.7
COL8A2P25067 RASSF1-AS1-201ENST00000629828 790 ntBASIC19.41■□□□□ 0.7
COL8A2P25067 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
COL8A2P25067 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
COL8A2P25067 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC19.41■□□□□ 0.7
COL8A2P25067 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
COL8A2P25067 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
COL8A2P25067 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
COL8A2P25067 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC19.4■□□□□ 0.7
COL8A2P25067 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
COL8A2P25067 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
COL8A2P25067 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
COL8A2P25067 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
COL8A2P25067 AL512631.2-201ENST00000604634 923 ntBASIC19.4■□□□□ 0.7
COL8A2P25067 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
COL8A2P25067 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
COL8A2P25067 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
COL8A2P25067 AC022211.4-201ENST00000625094 2161 ntBASIC19.4■□□□□ 0.7
COL8A2P25067 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
COL8A2P25067 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
COL8A2P25067 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
COL8A2P25067 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC19.39■□□□□ 0.69
COL8A2P25067 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
COL8A2P25067 STK32C-205ENST00000456004 607 ntTSL 2 BASIC19.39■□□□□ 0.69
COL8A2P25067 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC19.39■□□□□ 0.69
COL8A2P25067 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC19.39■□□□□ 0.69
COL8A2P25067 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
COL8A2P25067 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
COL8A2P25067 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
COL8A2P25067 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC19.39■□□□□ 0.69
COL8A2P25067 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
COL8A2P25067 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
COL8A2P25067 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
COL8A2P25067 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
COL8A2P25067 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
COL8A2P25067 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
COL8A2P25067 HLA-L-211ENST00000482052 1765 ntBASIC19.38■□□□□ 0.69
COL8A2P25067 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC19.38■□□□□ 0.69
COL8A2P25067 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
COL8A2P25067 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC19.38■□□□□ 0.69
COL8A2P25067 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
COL8A2P25067 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
COL8A2P25067 AL022069.1-201ENST00000568025 1636 ntBASIC19.37■□□□□ 0.69
COL8A2P25067 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
COL8A2P25067 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
COL8A2P25067 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC19.37■□□□□ 0.69
COL8A2P25067 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
COL8A2P25067 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
COL8A2P25067 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC19.37■□□□□ 0.69
COL8A2P25067 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
COL8A2P25067 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
COL8A2P25067 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
COL8A2P25067 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC19.36■□□□□ 0.69
COL8A2P25067 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC19.36■□□□□ 0.69
COL8A2P25067 REST-206ENST00000612429 1376 ntTSL 5 BASIC19.36■□□□□ 0.69
COL8A2P25067 REST-207ENST00000616975 1370 ntTSL 5 BASIC19.36■□□□□ 0.69
COL8A2P25067 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
COL8A2P25067 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 17.1 ms