Protein–RNA interactions for Protein: P12694

BCKDHA, 2-oxoisovalerate dehydrogenase subunit alpha, mitochondrial, humanhuman

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BCKDHAP12694 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC21.97■■□□□ 1.11
BCKDHAP12694 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
BCKDHAP12694 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC21.97■■□□□ 1.11
BCKDHAP12694 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC21.96■■□□□ 1.11
BCKDHAP12694 NFE2L3P1-201ENST00000588207 1959 ntBASIC21.96■■□□□ 1.11
BCKDHAP12694 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC21.96■■□□□ 1.11
BCKDHAP12694 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC21.96■■□□□ 1.11
BCKDHAP12694 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
BCKDHAP12694 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC21.96■■□□□ 1.11
BCKDHAP12694 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC21.96■■□□□ 1.11
BCKDHAP12694 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
BCKDHAP12694 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC21.96■■□□□ 1.11
BCKDHAP12694 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
BCKDHAP12694 AL161729.1-201ENST00000604104 1402 ntBASIC21.96■■□□□ 1.11
BCKDHAP12694 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC21.96■■□□□ 1.11
BCKDHAP12694 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
BCKDHAP12694 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
BCKDHAP12694 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC21.96■■□□□ 1.11
BCKDHAP12694 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
BCKDHAP12694 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
BCKDHAP12694 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC21.95■■□□□ 1.1
BCKDHAP12694 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
BCKDHAP12694 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC21.95■■□□□ 1.1
BCKDHAP12694 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC21.95■■□□□ 1.1
BCKDHAP12694 HYI-210ENST00000486909 905 ntTSL 5 BASIC21.95■■□□□ 1.1
BCKDHAP12694 BRD4-212ENST00000630599 726 ntTSL 2 BASIC21.95■■□□□ 1.1
BCKDHAP12694 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC21.95■■□□□ 1.1
BCKDHAP12694 ME2-208ENST00000638937 2471 ntTSL 5 BASIC21.95■■□□□ 1.1
BCKDHAP12694 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC21.95■■□□□ 1.1
BCKDHAP12694 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
BCKDHAP12694 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
BCKDHAP12694 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC21.94■■□□□ 1.1
BCKDHAP12694 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC21.94■■□□□ 1.1
BCKDHAP12694 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
BCKDHAP12694 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
BCKDHAP12694 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC21.94■■□□□ 1.1
BCKDHAP12694 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC21.94■■□□□ 1.1
BCKDHAP12694 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
BCKDHAP12694 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
BCKDHAP12694 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC21.94■■□□□ 1.1
BCKDHAP12694 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
BCKDHAP12694 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC21.94■■□□□ 1.1
BCKDHAP12694 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC21.94■■□□□ 1.1
BCKDHAP12694 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
BCKDHAP12694 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC21.93■■□□□ 1.1
BCKDHAP12694 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
BCKDHAP12694 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC21.93■■□□□ 1.1
BCKDHAP12694 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
BCKDHAP12694 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC21.92■■□□□ 1.1
BCKDHAP12694 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC21.92■■□□□ 1.1
BCKDHAP12694 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
BCKDHAP12694 EI24-213ENST00000618552 1747 ntTSL 5 BASIC21.92■■□□□ 1.1
BCKDHAP12694 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC21.92■■□□□ 1.1
BCKDHAP12694 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
BCKDHAP12694 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
BCKDHAP12694 DUX4L18-201ENST00000553347 1267 ntBASIC21.92■■□□□ 1.1
BCKDHAP12694 ABHD17AP5-201ENST00000580133 923 ntBASIC21.92■■□□□ 1.1
BCKDHAP12694 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC21.92■■□□□ 1.1
BCKDHAP12694 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
BCKDHAP12694 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC21.91■■□□□ 1.1
BCKDHAP12694 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC21.91■■□□□ 1.1
BCKDHAP12694 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
BCKDHAP12694 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
BCKDHAP12694 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC21.91■■□□□ 1.1
BCKDHAP12694 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC21.91■■□□□ 1.1
BCKDHAP12694 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC21.91■■□□□ 1.1
BCKDHAP12694 AC011551.1-201ENST00000614101 683 ntBASIC21.91■■□□□ 1.1
BCKDHAP12694 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC21.91■■□□□ 1.1
BCKDHAP12694 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC21.91■■□□□ 1.1
BCKDHAP12694 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
BCKDHAP12694 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
BCKDHAP12694 C9orf163-202ENST00000624034 2573 ntBASIC21.9■■□□□ 1.1
BCKDHAP12694 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
BCKDHAP12694 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
BCKDHAP12694 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
BCKDHAP12694 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC21.9■■□□□ 1.1
BCKDHAP12694 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
BCKDHAP12694 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC21.9■■□□□ 1.1
BCKDHAP12694 NTF6A-201ENST00000591175 560 ntBASIC21.9■■□□□ 1.1
BCKDHAP12694 AC019171.1-201ENST00000601251 1056 ntBASIC21.9■■□□□ 1.1
BCKDHAP12694 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
BCKDHAP12694 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC21.89■■□□□ 1.1
BCKDHAP12694 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
BCKDHAP12694 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC21.89■■□□□ 1.09
BCKDHAP12694 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
BCKDHAP12694 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC21.89■■□□□ 1.09
BCKDHAP12694 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
BCKDHAP12694 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC21.89■■□□□ 1.09
BCKDHAP12694 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC21.89■■□□□ 1.09
BCKDHAP12694 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
BCKDHAP12694 AL022069.1-201ENST00000568025 1636 ntBASIC21.88■■□□□ 1.09
BCKDHAP12694 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC21.88■■□□□ 1.09
BCKDHAP12694 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC21.88■■□□□ 1.09
BCKDHAP12694 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC21.88■■□□□ 1.09
BCKDHAP12694 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
BCKDHAP12694 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC21.88■■□□□ 1.09
BCKDHAP12694 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC21.88■■□□□ 1.09
BCKDHAP12694 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC21.87■■□□□ 1.09
BCKDHAP12694 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
BCKDHAP12694 MTX2-204ENST00000443241 799 ntTSL 3 BASIC21.87■■□□□ 1.09
Retrieved 100 of 98,524 protein–RNA pairs in 89 ms