Protein–RNA interactions for Protein: P09630

HOXC6, Homeobox protein Hox-C6, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6P09630 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
HOXC6P09630 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
HOXC6P09630 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
HOXC6P09630 CCKBR-201ENST00000334619 2121 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
HOXC6P09630 AC131274.2-201ENST00000580697 1507 ntBASIC26.26■■□□□ 1.79
HOXC6P09630 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
HOXC6P09630 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC26.26■■□□□ 1.79
HOXC6P09630 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC26.26■■□□□ 1.79
HOXC6P09630 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
HOXC6P09630 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC26.26■■□□□ 1.79
HOXC6P09630 AL138724.1-201ENST00000606771 1088 ntBASIC26.26■■□□□ 1.79
HOXC6P09630 CA15P2-201ENST00000611168 834 ntBASIC26.26■■□□□ 1.79
HOXC6P09630 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
HOXC6P09630 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
HOXC6P09630 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC26.25■■□□□ 1.79
HOXC6P09630 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
HOXC6P09630 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC26.25■■□□□ 1.79
HOXC6P09630 MAG-206ENST00000597035 542 ntTSL 4 BASIC26.25■■□□□ 1.79
HOXC6P09630 AC011298.3-201ENST00000615796 283 ntBASIC26.25■■□□□ 1.79
HOXC6P09630 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
HOXC6P09630 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC26.25■■□□□ 1.79
HOXC6P09630 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC26.25■■□□□ 1.79
HOXC6P09630 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
HOXC6P09630 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC26.24■■□□□ 1.79
HOXC6P09630 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
HOXC6P09630 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
HOXC6P09630 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
HOXC6P09630 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC26.23■■□□□ 1.79
HOXC6P09630 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC26.23■■□□□ 1.79
HOXC6P09630 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
HOXC6P09630 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC26.23■■□□□ 1.79
HOXC6P09630 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC26.23■■□□□ 1.79
HOXC6P09630 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC26.22■■□□□ 1.79
HOXC6P09630 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC26.22■■□□□ 1.79
HOXC6P09630 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
HOXC6P09630 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
HOXC6P09630 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
HOXC6P09630 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC26.22■■□□□ 1.79
HOXC6P09630 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC26.22■■□□□ 1.79
HOXC6P09630 PARL-206ENST00000435888 1098 ntTSL 5 BASIC26.22■■□□□ 1.79
HOXC6P09630 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
HOXC6P09630 AC027682.1-201ENST00000562846 899 ntBASIC26.22■■□□□ 1.79
HOXC6P09630 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
HOXC6P09630 EXOC3-209ENST00000512944 2825 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
HOXC6P09630 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC26.22■■□□□ 1.79
HOXC6P09630 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
HOXC6P09630 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
HOXC6P09630 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC26.21■■□□□ 1.79
HOXC6P09630 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
HOXC6P09630 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC26.21■■□□□ 1.79
HOXC6P09630 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC26.21■■□□□ 1.79
HOXC6P09630 AC099791.2-201ENST00000605725 427 ntBASIC26.21■■□□□ 1.79
HOXC6P09630 SENP3-201ENST00000321337 2611 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
HOXC6P09630 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC26.21■■□□□ 1.79
HOXC6P09630 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC26.2■■□□□ 1.79
HOXC6P09630 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC26.2■■□□□ 1.79
HOXC6P09630 PTCHD3P2-201ENST00000424937 1205 ntBASIC26.2■■□□□ 1.78
HOXC6P09630 STK32C-205ENST00000456004 607 ntTSL 2 BASIC26.2■■□□□ 1.78
HOXC6P09630 PLD4-205ENST00000553861 667 ntTSL 2 BASIC26.2■■□□□ 1.78
HOXC6P09630 AC087623.3-201ENST00000607047 1098 ntBASIC26.2■■□□□ 1.78
HOXC6P09630 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC26.2■■□□□ 1.78
HOXC6P09630 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC26.19■■□□□ 1.78
HOXC6P09630 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
HOXC6P09630 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC26.19■■□□□ 1.78
HOXC6P09630 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC26.19■■□□□ 1.78
HOXC6P09630 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC26.19■■□□□ 1.78
HOXC6P09630 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
HOXC6P09630 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC26.19■■□□□ 1.78
HOXC6P09630 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC26.19■■□□□ 1.78
HOXC6P09630 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
HOXC6P09630 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC26.19■■□□□ 1.78
HOXC6P09630 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC26.18■■□□□ 1.78
HOXC6P09630 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
HOXC6P09630 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC26.18■■□□□ 1.78
HOXC6P09630 AC009102.2-201ENST00000606772 1639 ntBASIC26.17■■□□□ 1.78
HOXC6P09630 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
HOXC6P09630 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC26.17■■□□□ 1.78
HOXC6P09630 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC26.17■■□□□ 1.78
HOXC6P09630 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC26.17■■□□□ 1.78
HOXC6P09630 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
HOXC6P09630 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC26.16■■□□□ 1.78
HOXC6P09630 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
HOXC6P09630 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC26.16■■□□□ 1.78
HOXC6P09630 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC26.16■■□□□ 1.78
HOXC6P09630 AL162430.1-201ENST00000480705 870 ntBASIC26.16■■□□□ 1.78
HOXC6P09630 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC26.16■■□□□ 1.78
HOXC6P09630 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC26.16■■□□□ 1.78
HOXC6P09630 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC26.16■■□□□ 1.78
HOXC6P09630 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC26.15■■□□□ 1.78
HOXC6P09630 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC26.15■■□□□ 1.78
HOXC6P09630 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC26.15■■□□□ 1.78
HOXC6P09630 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC26.15■■□□□ 1.78
HOXC6P09630 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC26.15■■□□□ 1.78
HOXC6P09630 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC26.15■■□□□ 1.78
HOXC6P09630 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC26.14■■□□□ 1.78
HOXC6P09630 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.78
HOXC6P09630 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.78
HOXC6P09630 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC26.14■■□□□ 1.78
HOXC6P09630 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC26.14■■□□□ 1.78
HOXC6P09630 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC26.14■■□□□ 1.78
Retrieved 100 of 98,524 protein–RNA pairs in 15.7 ms