Protein–RNA interactions for Protein: P09326

CD48, CD48 antigen, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD48P09326 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.42
CD48P09326 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC23.89■■□□□ 1.41
CD48P09326 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC23.89■■□□□ 1.41
CD48P09326 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC23.89■■□□□ 1.41
CD48P09326 MIR4508-201ENST00000584178 70 ntBASIC23.89■■□□□ 1.41
CD48P09326 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC23.89■■□□□ 1.41
CD48P09326 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC23.89■■□□□ 1.41
CD48P09326 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC23.89■■□□□ 1.41
CD48P09326 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
CD48P09326 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC23.89■■□□□ 1.41
CD48P09326 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC23.89■■□□□ 1.41
CD48P09326 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC23.88■■□□□ 1.41
CD48P09326 CD37-213ENST00000598095 1598 ntTSL 2 BASIC23.88■■□□□ 1.41
CD48P09326 KRT18P24-201ENST00000344739 1156 ntBASIC23.88■■□□□ 1.41
CD48P09326 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC23.88■■□□□ 1.41
CD48P09326 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC23.88■■□□□ 1.41
CD48P09326 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
CD48P09326 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
CD48P09326 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC23.88■■□□□ 1.41
CD48P09326 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
CD48P09326 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC23.87■■□□□ 1.41
CD48P09326 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC23.87■■□□□ 1.41
CD48P09326 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC23.87■■□□□ 1.41
CD48P09326 AC131274.2-201ENST00000580697 1507 ntBASIC23.87■■□□□ 1.41
CD48P09326 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
CD48P09326 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
CD48P09326 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
CD48P09326 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
CD48P09326 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC23.86■■□□□ 1.41
CD48P09326 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC23.86■■□□□ 1.41
CD48P09326 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC23.86■■□□□ 1.41
CD48P09326 MIR4281-201ENST00000580852 62 ntBASIC23.86■■□□□ 1.41
CD48P09326 THA1P-201ENST00000590384 1145 ntBASIC23.86■■□□□ 1.41
CD48P09326 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC23.86■■□□□ 1.41
CD48P09326 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC23.86■■□□□ 1.41
CD48P09326 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
CD48P09326 AF131216.4-201ENST00000638924 1588 ntBASIC23.86■■□□□ 1.41
CD48P09326 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC23.86■■□□□ 1.41
CD48P09326 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
CD48P09326 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
CD48P09326 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
CD48P09326 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
CD48P09326 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC23.85■■□□□ 1.41
CD48P09326 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
CD48P09326 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
CD48P09326 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
CD48P09326 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC23.85■■□□□ 1.41
CD48P09326 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
CD48P09326 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
CD48P09326 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC23.85■■□□□ 1.41
CD48P09326 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC23.85■■□□□ 1.41
CD48P09326 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
CD48P09326 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
CD48P09326 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
CD48P09326 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
CD48P09326 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC23.84■■□□□ 1.41
CD48P09326 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
CD48P09326 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
CD48P09326 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
CD48P09326 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC23.84■■□□□ 1.41
CD48P09326 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC23.84■■□□□ 1.41
CD48P09326 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
CD48P09326 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC23.83■■□□□ 1.41
CD48P09326 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
CD48P09326 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
CD48P09326 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
CD48P09326 AC103724.3-201ENST00000564481 992 ntBASIC23.83■■□□□ 1.41
CD48P09326 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC23.83■■□□□ 1.4
CD48P09326 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC23.82■■□□□ 1.4
CD48P09326 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
CD48P09326 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC23.82■■□□□ 1.4
CD48P09326 LTK-203ENST00000453182 2412 ntTSL 2 BASIC23.82■■□□□ 1.4
CD48P09326 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
CD48P09326 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC23.82■■□□□ 1.4
CD48P09326 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC23.82■■□□□ 1.4
CD48P09326 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC23.82■■□□□ 1.4
CD48P09326 EI24-213ENST00000618552 1747 ntTSL 5 BASIC23.81■■□□□ 1.4
CD48P09326 AL022069.1-201ENST00000568025 1636 ntBASIC23.81■■□□□ 1.4
CD48P09326 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC23.81■■□□□ 1.4
CD48P09326 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC23.81■■□□□ 1.4
CD48P09326 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
CD48P09326 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC23.81■■□□□ 1.4
CD48P09326 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC23.8■■□□□ 1.4
CD48P09326 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
CD48P09326 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
CD48P09326 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC23.8■■□□□ 1.4
CD48P09326 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC23.8■■□□□ 1.4
CD48P09326 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC23.8■■□□□ 1.4
CD48P09326 RARA-203ENST00000394086 2008 ntTSL 2 BASIC23.8■■□□□ 1.4
CD48P09326 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
CD48P09326 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC23.8■■□□□ 1.4
CD48P09326 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC23.8■■□□□ 1.4
CD48P09326 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC23.8■■□□□ 1.4
CD48P09326 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC23.8■■□□□ 1.4
CD48P09326 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC23.8■■□□□ 1.4
CD48P09326 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
CD48P09326 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
CD48P09326 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
CD48P09326 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
CD48P09326 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC23.79■■□□□ 1.4
Retrieved 100 of 98,524 protein–RNA pairs in 14.4 ms