Protein–RNA interactions for Protein: P01730

CD4, T-cell surface glycoprotein CD4, humanhuman

Predictions only

Length 458 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD4P01730 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC25.61■■□□□ 1.69
CD4P01730 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC25.61■■□□□ 1.69
CD4P01730 MAG-206ENST00000597035 542 ntTSL 4 BASIC25.61■■□□□ 1.69
CD4P01730 AC087623.3-201ENST00000607047 1098 ntBASIC25.61■■□□□ 1.69
CD4P01730 AC092171.4-201ENST00000609130 632 ntBASIC25.61■■□□□ 1.69
CD4P01730 CA15P2-201ENST00000611168 834 ntBASIC25.61■■□□□ 1.69
CD4P01730 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC25.61■■□□□ 1.69
CD4P01730 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
CD4P01730 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC25.61■■□□□ 1.69
CD4P01730 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC25.6■■□□□ 1.69
CD4P01730 RASA4CP-201ENST00000424092 1398 ntBASIC25.6■■□□□ 1.69
CD4P01730 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC25.6■■□□□ 1.69
CD4P01730 PTMA-205ENST00000410064 814 ntTSL 2 BASIC25.6■■□□□ 1.69
CD4P01730 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC25.6■■□□□ 1.69
CD4P01730 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC25.6■■□□□ 1.69
CD4P01730 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC25.6■■□□□ 1.69
CD4P01730 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC25.6■■□□□ 1.69
CD4P01730 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
CD4P01730 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC25.59■■□□□ 1.69
CD4P01730 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC25.59■■□□□ 1.69
CD4P01730 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC25.59■■□□□ 1.69
CD4P01730 SERBP1P1-201ENST00000396021 1160 ntBASIC25.59■■□□□ 1.69
CD4P01730 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC25.59■■□□□ 1.69
CD4P01730 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC25.59■■□□□ 1.69
CD4P01730 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC25.59■■□□□ 1.69
CD4P01730 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
CD4P01730 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC25.58■■□□□ 1.69
CD4P01730 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC25.58■■□□□ 1.69
CD4P01730 PLD4-205ENST00000553861 667 ntTSL 2 BASIC25.58■■□□□ 1.69
CD4P01730 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC25.58■■□□□ 1.69
CD4P01730 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC25.58■■□□□ 1.69
CD4P01730 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC25.57■■□□□ 1.68
CD4P01730 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC25.57■■□□□ 1.68
CD4P01730 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC25.57■■□□□ 1.68
CD4P01730 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC25.57■■□□□ 1.68
CD4P01730 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
CD4P01730 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC25.57■■□□□ 1.68
CD4P01730 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC25.57■■□□□ 1.68
CD4P01730 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC25.57■■□□□ 1.68
CD4P01730 AL162430.1-201ENST00000480705 870 ntBASIC25.57■■□□□ 1.68
CD4P01730 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC25.57■■□□□ 1.68
CD4P01730 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC25.56■■□□□ 1.68
CD4P01730 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
CD4P01730 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC25.56■■□□□ 1.68
CD4P01730 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
CD4P01730 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC25.56■■□□□ 1.68
CD4P01730 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
CD4P01730 DUSP8P4-201ENST00000399538 1761 ntBASIC25.56■■□□□ 1.68
CD4P01730 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
CD4P01730 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC25.55■■□□□ 1.68
CD4P01730 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC25.55■■□□□ 1.68
CD4P01730 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC25.55■■□□□ 1.68
CD4P01730 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC25.55■■□□□ 1.68
CD4P01730 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC25.55■■□□□ 1.68
CD4P01730 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC25.54■■□□□ 1.68
CD4P01730 AC091060.1-201ENST00000623524 1766 ntBASIC25.54■■□□□ 1.68
CD4P01730 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
CD4P01730 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC25.54■■□□□ 1.68
CD4P01730 REST-206ENST00000612429 1376 ntTSL 5 BASIC25.54■■□□□ 1.68
CD4P01730 REST-207ENST00000616975 1370 ntTSL 5 BASIC25.54■■□□□ 1.68
CD4P01730 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC25.53■■□□□ 1.68
CD4P01730 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC25.53■■□□□ 1.68
CD4P01730 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
CD4P01730 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC25.53■■□□□ 1.68
CD4P01730 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC25.53■■□□□ 1.68
CD4P01730 AC027682.1-201ENST00000562846 899 ntBASIC25.53■■□□□ 1.68
CD4P01730 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC25.53■■□□□ 1.68
CD4P01730 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC25.53■■□□□ 1.68
CD4P01730 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
CD4P01730 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC25.52■■□□□ 1.68
CD4P01730 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC25.52■■□□□ 1.68
CD4P01730 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC25.52■■□□□ 1.68
CD4P01730 AC099791.2-201ENST00000605725 427 ntBASIC25.52■■□□□ 1.68
CD4P01730 AC011298.3-201ENST00000615796 283 ntBASIC25.52■■□□□ 1.68
CD4P01730 AC145676.1-201ENST00000514988 2004 ntBASIC25.52■■□□□ 1.68
CD4P01730 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC25.52■■□□□ 1.68
CD4P01730 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
CD4P01730 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC25.51■■□□□ 1.67
CD4P01730 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC25.51■■□□□ 1.67
CD4P01730 PTCHD3P2-201ENST00000424937 1205 ntBASIC25.51■■□□□ 1.67
CD4P01730 AL138724.1-201ENST00000606771 1088 ntBASIC25.51■■□□□ 1.67
CD4P01730 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC25.51■■□□□ 1.67
CD4P01730 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
CD4P01730 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC25.51■■□□□ 1.67
CD4P01730 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC25.51■■□□□ 1.67
CD4P01730 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC25.51■■□□□ 1.67
CD4P01730 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC25.51■■□□□ 1.67
CD4P01730 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC25.51■■□□□ 1.67
CD4P01730 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
CD4P01730 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC25.5■■□□□ 1.67
CD4P01730 GLI3-203ENST00000437480 451 ntTSL 2 BASIC25.5■■□□□ 1.67
CD4P01730 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC25.5■■□□□ 1.67
CD4P01730 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC25.5■■□□□ 1.67
CD4P01730 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC25.5■■□□□ 1.67
CD4P01730 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC25.5■■□□□ 1.67
CD4P01730 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC25.5■■□□□ 1.67
CD4P01730 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC25.49■■□□□ 1.67
CD4P01730 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC25.49■■□□□ 1.67
CD4P01730 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC25.49■■□□□ 1.67
CD4P01730 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC25.49■■□□□ 1.67
Retrieved 100 of 98,524 protein–RNA pairs in 52.8 ms