Protein–RNA interactions for Protein: P00558

PGK1, Phosphoglycerate kinase 1, humanhuman

Predictions only

Length 417 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PGK1P00558 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
PGK1P00558 IHH-201ENST00000295731 2023 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
PGK1P00558 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
PGK1P00558 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC25.84■■□□□ 1.73
PGK1P00558 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC25.84■■□□□ 1.73
PGK1P00558 AC027682.1-201ENST00000562846 899 ntBASIC25.84■■□□□ 1.73
PGK1P00558 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC25.84■■□□□ 1.73
PGK1P00558 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC25.83■■□□□ 1.73
PGK1P00558 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC25.83■■□□□ 1.73
PGK1P00558 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC25.83■■□□□ 1.73
PGK1P00558 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC25.83■■□□□ 1.72
PGK1P00558 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC25.83■■□□□ 1.72
PGK1P00558 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC25.82■■□□□ 1.72
PGK1P00558 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC25.82■■□□□ 1.72
PGK1P00558 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC25.82■■□□□ 1.72
PGK1P00558 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC25.82■■□□□ 1.72
PGK1P00558 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
PGK1P00558 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC25.82■■□□□ 1.72
PGK1P00558 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC25.82■■□□□ 1.72
PGK1P00558 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC25.81■■□□□ 1.72
PGK1P00558 PLSCR3-202ENST00000535512 2067 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
PGK1P00558 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
PGK1P00558 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
PGK1P00558 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC25.81■■□□□ 1.72
PGK1P00558 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC25.81■■□□□ 1.72
PGK1P00558 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
PGK1P00558 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC25.81■■□□□ 1.72
PGK1P00558 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
PGK1P00558 AC009102.2-201ENST00000606772 1639 ntBASIC25.81■■□□□ 1.72
PGK1P00558 TNIP2-201ENST00000315423 1974 ntAPPRIS P3 TSL 1 (best) BASIC25.8■■□□□ 1.72
PGK1P00558 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC25.8■■□□□ 1.72
PGK1P00558 AC099791.1-201ENST00000416440 715 ntBASIC25.8■■□□□ 1.72
PGK1P00558 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC25.8■■□□□ 1.72
PGK1P00558 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC25.8■■□□□ 1.72
PGK1P00558 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC25.8■■□□□ 1.72
PGK1P00558 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC25.8■■□□□ 1.72
PGK1P00558 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC25.8■■□□□ 1.72
PGK1P00558 AC011298.3-201ENST00000615796 283 ntBASIC25.8■■□□□ 1.72
PGK1P00558 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC25.8■■□□□ 1.72
PGK1P00558 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC25.8■■□□□ 1.72
PGK1P00558 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC25.79■■□□□ 1.72
PGK1P00558 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC25.79■■□□□ 1.72
PGK1P00558 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC25.79■■□□□ 1.72
PGK1P00558 GLI3-203ENST00000437480 451 ntTSL 2 BASIC25.79■■□□□ 1.72
PGK1P00558 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC25.79■■□□□ 1.72
PGK1P00558 GABRA5-203ENST00000400081 2761 ntAPPRIS P1 TSL 5 BASIC25.79■■□□□ 1.72
PGK1P00558 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC25.79■■□□□ 1.72
PGK1P00558 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC25.78■■□□□ 1.72
PGK1P00558 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC25.78■■□□□ 1.72
PGK1P00558 IRS3P-201ENST00000223076 1006 ntBASIC25.78■■□□□ 1.72
PGK1P00558 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC25.78■■□□□ 1.72
PGK1P00558 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC25.78■■□□□ 1.72
PGK1P00558 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.72
PGK1P00558 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
PGK1P00558 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
PGK1P00558 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC25.77■■□□□ 1.72
PGK1P00558 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC25.77■■□□□ 1.72
PGK1P00558 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC25.77■■□□□ 1.72
PGK1P00558 AL138724.1-201ENST00000606771 1088 ntBASIC25.77■■□□□ 1.72
PGK1P00558 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC25.77■■□□□ 1.72
PGK1P00558 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC25.77■■□□□ 1.72
PGK1P00558 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC25.76■■□□□ 1.71
PGK1P00558 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC25.76■■□□□ 1.71
PGK1P00558 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC25.76■■□□□ 1.71
PGK1P00558 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC25.75■■□□□ 1.71
PGK1P00558 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC25.75■■□□□ 1.71
PGK1P00558 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC25.75■■□□□ 1.71
PGK1P00558 JTB-203ENST00000368589 1216 ntTSL 2 BASIC25.75■■□□□ 1.71
PGK1P00558 STK32C-205ENST00000456004 607 ntTSL 2 BASIC25.75■■□□□ 1.71
PGK1P00558 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC25.75■■□□□ 1.71
PGK1P00558 RHOF-204ENST00000537265 699 ntTSL 2 BASIC25.75■■□□□ 1.71
PGK1P00558 SPIRE1-202ENST00000409402 5665 ntAPPRIS ALT2 TSL 1 (best) BASIC25.74■■□□□ 1.71
PGK1P00558 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
PGK1P00558 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
PGK1P00558 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC25.74■■□□□ 1.71
PGK1P00558 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC25.74■■□□□ 1.71
PGK1P00558 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC25.74■■□□□ 1.71
PGK1P00558 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
PGK1P00558 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC25.74■■□□□ 1.71
PGK1P00558 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC25.74■■□□□ 1.71
PGK1P00558 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC25.73■■□□□ 1.71
PGK1P00558 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
PGK1P00558 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC25.73■■□□□ 1.71
PGK1P00558 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
PGK1P00558 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC25.73■■□□□ 1.71
PGK1P00558 HES6-206ENST00000409574 738 ntTSL 2 BASIC25.73■■□□□ 1.71
PGK1P00558 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC25.73■■□□□ 1.71
PGK1P00558 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC25.73■■□□□ 1.71
PGK1P00558 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC25.73■■□□□ 1.71
PGK1P00558 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC25.73■■□□□ 1.71
PGK1P00558 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC25.73■■□□□ 1.71
PGK1P00558 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC25.73■■□□□ 1.71
PGK1P00558 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
PGK1P00558 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
PGK1P00558 HOXB3-201ENST00000311626 2642 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
PGK1P00558 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC25.72■■□□□ 1.71
PGK1P00558 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC25.72■■□□□ 1.71
PGK1P00558 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC25.72■■□□□ 1.71
PGK1P00558 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
PGK1P00558 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC25.72■■□□□ 1.71
Retrieved 100 of 98,524 protein–RNA pairs in 92.1 ms