Protein–RNA interactions for Protein: O60906

SMPD2, Sphingomyelin phosphodiesterase 2, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD2O60906 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
SMPD2O60906 TK2-202ENST00000417693 1046 ntTSL 2 BASIC20.12■□□□□ 0.81
SMPD2O60906 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC20.12■□□□□ 0.81
SMPD2O60906 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC20.12■□□□□ 0.81
SMPD2O60906 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC20.12■□□□□ 0.81
SMPD2O60906 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
SMPD2O60906 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC20.11■□□□□ 0.81
SMPD2O60906 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC20.11■□□□□ 0.81
SMPD2O60906 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
SMPD2O60906 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
SMPD2O60906 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC20.11■□□□□ 0.81
SMPD2O60906 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC20.11■□□□□ 0.81
SMPD2O60906 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC20.11■□□□□ 0.81
SMPD2O60906 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
SMPD2O60906 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
SMPD2O60906 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC20.11■□□□□ 0.81
SMPD2O60906 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC20.1■□□□□ 0.81
SMPD2O60906 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
SMPD2O60906 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC20.1■□□□□ 0.81
SMPD2O60906 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC20.1■□□□□ 0.81
SMPD2O60906 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
SMPD2O60906 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
SMPD2O60906 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
SMPD2O60906 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC20.09■□□□□ 0.81
SMPD2O60906 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC20.09■□□□□ 0.81
SMPD2O60906 SENP5-202ENST00000419026 973 ntTSL 3 BASIC20.09■□□□□ 0.81
SMPD2O60906 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC20.09■□□□□ 0.81
SMPD2O60906 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC20.09■□□□□ 0.81
SMPD2O60906 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC20.09■□□□□ 0.81
SMPD2O60906 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC20.09■□□□□ 0.81
SMPD2O60906 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC20.09■□□□□ 0.81
SMPD2O60906 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
SMPD2O60906 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
SMPD2O60906 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
SMPD2O60906 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC20.08■□□□□ 0.81
SMPD2O60906 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
SMPD2O60906 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC20.08■□□□□ 0.81
SMPD2O60906 AC133561.4-201ENST00000566112 224 ntBASIC20.08■□□□□ 0.81
SMPD2O60906 MIR4466-201ENST00000606121 54 ntBASIC20.08■□□□□ 0.81
SMPD2O60906 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC20.08■□□□□ 0.8
SMPD2O60906 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
SMPD2O60906 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC20.08■□□□□ 0.8
SMPD2O60906 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
SMPD2O60906 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
SMPD2O60906 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC20.07■□□□□ 0.8
SMPD2O60906 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
SMPD2O60906 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
SMPD2O60906 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
SMPD2O60906 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
SMPD2O60906 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
SMPD2O60906 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC20.06■□□□□ 0.8
SMPD2O60906 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC20.06■□□□□ 0.8
SMPD2O60906 CLTA-210ENST00000540080 989 ntTSL 2 BASIC20.06■□□□□ 0.8
SMPD2O60906 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC20.06■□□□□ 0.8
SMPD2O60906 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
SMPD2O60906 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
SMPD2O60906 HLA-L-211ENST00000482052 1765 ntBASIC20.06■□□□□ 0.8
SMPD2O60906 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC20.05■□□□□ 0.8
SMPD2O60906 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC20.05■□□□□ 0.8
SMPD2O60906 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
SMPD2O60906 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC20.05■□□□□ 0.8
SMPD2O60906 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC20.05■□□□□ 0.8
SMPD2O60906 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
SMPD2O60906 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC20.05■□□□□ 0.8
SMPD2O60906 EED-207ENST00000528180 1745 ntTSL 5 BASIC20.05■□□□□ 0.8
SMPD2O60906 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
SMPD2O60906 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SMPD2O60906 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
SMPD2O60906 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SMPD2O60906 CD72-202ENST00000378430 585 ntTSL 3 BASIC20.04■□□□□ 0.8
SMPD2O60906 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
SMPD2O60906 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC20.04■□□□□ 0.8
SMPD2O60906 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
SMPD2O60906 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
SMPD2O60906 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC20.03■□□□□ 0.8
SMPD2O60906 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SMPD2O60906 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC20.03■□□□□ 0.8
SMPD2O60906 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC20.03■□□□□ 0.8
SMPD2O60906 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC20.03■□□□□ 0.8
SMPD2O60906 AF131216.4-201ENST00000638924 1588 ntBASIC20.03■□□□□ 0.8
SMPD2O60906 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC20.03■□□□□ 0.8
SMPD2O60906 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SMPD2O60906 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
SMPD2O60906 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC20.02■□□□□ 0.8
SMPD2O60906 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
SMPD2O60906 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.79
SMPD2O60906 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC20.02■□□□□ 0.79
SMPD2O60906 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC20.02■□□□□ 0.79
SMPD2O60906 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
SMPD2O60906 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC20.01■□□□□ 0.79
SMPD2O60906 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
SMPD2O60906 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
SMPD2O60906 AL512631.2-201ENST00000604634 923 ntBASIC20.01■□□□□ 0.79
SMPD2O60906 AL139125.2-201ENST00000623134 1869 ntBASIC20.01■□□□□ 0.79
SMPD2O60906 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC20■□□□□ 0.79
SMPD2O60906 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
SMPD2O60906 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
SMPD2O60906 GUK1-205ENST00000366722 850 ntTSL 3 BASIC20■□□□□ 0.79
SMPD2O60906 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
SMPD2O60906 TFPT-201ENST00000391757 774 ntTSL 5 BASIC20■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 51.4 ms