Protein–RNA interactions for Protein: O60343

TBC1D4, TBC1 domain family member 4, humanhuman

Predictions only

Length 1,298 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D4O60343 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC24.45■■□□□ 1.5
TBC1D4O60343 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC24.44■■□□□ 1.5
TBC1D4O60343 REST-206ENST00000612429 1376 ntTSL 5 BASIC24.44■■□□□ 1.5
TBC1D4O60343 REST-207ENST00000616975 1370 ntTSL 5 BASIC24.44■■□□□ 1.5
TBC1D4O60343 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
TBC1D4O60343 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC24.44■■□□□ 1.5
TBC1D4O60343 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC24.44■■□□□ 1.5
TBC1D4O60343 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC24.44■■□□□ 1.5
TBC1D4O60343 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
TBC1D4O60343 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC24.44■■□□□ 1.5
TBC1D4O60343 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC24.44■■□□□ 1.5
TBC1D4O60343 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
TBC1D4O60343 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
TBC1D4O60343 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
TBC1D4O60343 AC005837.3-201ENST00000612163 286 ntBASIC24.43■■□□□ 1.5
TBC1D4O60343 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC24.43■■□□□ 1.5
TBC1D4O60343 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
TBC1D4O60343 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC24.43■■□□□ 1.5
TBC1D4O60343 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC24.43■■□□□ 1.5
TBC1D4O60343 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC24.42■■□□□ 1.5
TBC1D4O60343 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC24.42■■□□□ 1.5
TBC1D4O60343 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
TBC1D4O60343 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC24.41■■□□□ 1.5
TBC1D4O60343 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
TBC1D4O60343 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
TBC1D4O60343 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC24.41■■□□□ 1.5
TBC1D4O60343 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC24.41■■□□□ 1.5
TBC1D4O60343 AL022069.1-201ENST00000568025 1636 ntBASIC24.41■■□□□ 1.5
TBC1D4O60343 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC24.41■■□□□ 1.5
TBC1D4O60343 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC24.41■■□□□ 1.5
TBC1D4O60343 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC24.41■■□□□ 1.5
TBC1D4O60343 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC24.41■■□□□ 1.5
TBC1D4O60343 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC24.41■■□□□ 1.5
TBC1D4O60343 GATM-206ENST00000558336 1522 ntTSL 2 BASIC24.4■■□□□ 1.5
TBC1D4O60343 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
TBC1D4O60343 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC24.4■■□□□ 1.5
TBC1D4O60343 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
TBC1D4O60343 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
TBC1D4O60343 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC24.4■■□□□ 1.5
TBC1D4O60343 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC24.4■■□□□ 1.5
TBC1D4O60343 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC24.4■■□□□ 1.5
TBC1D4O60343 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC24.39■■□□□ 1.5
TBC1D4O60343 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC24.39■■□□□ 1.5
TBC1D4O60343 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC24.39■■□□□ 1.5
TBC1D4O60343 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
TBC1D4O60343 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC24.39■■□□□ 1.49
TBC1D4O60343 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC24.39■■□□□ 1.49
TBC1D4O60343 AC106739.1-201ENST00000617035 715 ntBASIC24.39■■□□□ 1.49
TBC1D4O60343 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC24.39■■□□□ 1.49
TBC1D4O60343 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC24.39■■□□□ 1.49
TBC1D4O60343 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC24.39■■□□□ 1.49
TBC1D4O60343 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
TBC1D4O60343 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC24.39■■□□□ 1.49
TBC1D4O60343 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
TBC1D4O60343 SRD5A1P1-201ENST00000442297 786 ntBASIC24.38■■□□□ 1.49
TBC1D4O60343 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC24.38■■□□□ 1.49
TBC1D4O60343 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
TBC1D4O60343 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC24.38■■□□□ 1.49
TBC1D4O60343 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC24.37■■□□□ 1.49
TBC1D4O60343 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC24.37■■□□□ 1.49
TBC1D4O60343 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
TBC1D4O60343 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
TBC1D4O60343 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
TBC1D4O60343 UNC93B3-201ENST00000308076 687 ntBASIC24.37■■□□□ 1.49
TBC1D4O60343 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
TBC1D4O60343 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC24.37■■□□□ 1.49
TBC1D4O60343 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC24.36■■□□□ 1.49
TBC1D4O60343 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC24.36■■□□□ 1.49
TBC1D4O60343 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
TBC1D4O60343 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
TBC1D4O60343 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC24.36■■□□□ 1.49
TBC1D4O60343 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC24.36■■□□□ 1.49
TBC1D4O60343 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
TBC1D4O60343 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC24.36■■□□□ 1.49
TBC1D4O60343 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
TBC1D4O60343 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC24.35■■□□□ 1.49
TBC1D4O60343 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC24.35■■□□□ 1.49
TBC1D4O60343 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC24.35■■□□□ 1.49
TBC1D4O60343 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC24.35■■□□□ 1.49
TBC1D4O60343 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
TBC1D4O60343 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC24.35■■□□□ 1.49
TBC1D4O60343 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
TBC1D4O60343 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC24.35■■□□□ 1.49
TBC1D4O60343 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
TBC1D4O60343 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC24.35■■□□□ 1.49
TBC1D4O60343 HLA-L-211ENST00000482052 1765 ntBASIC24.34■■□□□ 1.49
TBC1D4O60343 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
TBC1D4O60343 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
TBC1D4O60343 PBX2P1-201ENST00000493219 1291 ntBASIC24.34■■□□□ 1.49
TBC1D4O60343 AL031432.3-201ENST00000607698 485 ntBASIC24.34■■□□□ 1.49
TBC1D4O60343 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC24.34■■□□□ 1.49
TBC1D4O60343 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
TBC1D4O60343 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
TBC1D4O60343 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC24.34■■□□□ 1.49
TBC1D4O60343 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
TBC1D4O60343 CD37-213ENST00000598095 1598 ntTSL 2 BASIC24.33■■□□□ 1.49
TBC1D4O60343 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC24.33■■□□□ 1.49
TBC1D4O60343 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC24.33■■□□□ 1.49
TBC1D4O60343 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC24.33■■□□□ 1.49
TBC1D4O60343 CREM-210ENST00000374721 2020 ntTSL 5 BASIC24.33■■□□□ 1.49
Retrieved 100 of 98,524 protein–RNA pairs in 20.2 ms