Protein–RNA interactions for Protein: A6NM66

LINC01548, Uncharacterized protein encoded by LINC01548, humanhuman

Predictions only

Length 108 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01548A6NM66 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
LINC01548A6NM66 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC18.2■□□□□ 0.5
LINC01548A6NM66 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC18.2■□□□□ 0.5
LINC01548A6NM66 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC18.19■□□□□ 0.5
LINC01548A6NM66 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
LINC01548A6NM66 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
LINC01548A6NM66 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
LINC01548A6NM66 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
LINC01548A6NM66 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
LINC01548A6NM66 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
LINC01548A6NM66 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC18.19■□□□□ 0.5
LINC01548A6NM66 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC18.19■□□□□ 0.5
LINC01548A6NM66 GRAMD4P7-201ENST00000578182 1232 ntBASIC18.19■□□□□ 0.5
LINC01548A6NM66 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC18.19■□□□□ 0.5
LINC01548A6NM66 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
LINC01548A6NM66 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC18.19■□□□□ 0.5
LINC01548A6NM66 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC18.19■□□□□ 0.5
LINC01548A6NM66 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC18.19■□□□□ 0.5
LINC01548A6NM66 EED-207ENST00000528180 1745 ntTSL 5 BASIC18.18■□□□□ 0.5
LINC01548A6NM66 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
LINC01548A6NM66 AC004448.1-201ENST00000458332 883 ntBASIC18.18■□□□□ 0.5
LINC01548A6NM66 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC18.18■□□□□ 0.5
LINC01548A6NM66 AC010997.5-201ENST00000609182 354 ntBASIC18.18■□□□□ 0.5
LINC01548A6NM66 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
LINC01548A6NM66 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC18.18■□□□□ 0.5
LINC01548A6NM66 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
LINC01548A6NM66 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
LINC01548A6NM66 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
LINC01548A6NM66 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC18.18■□□□□ 0.5
LINC01548A6NM66 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
LINC01548A6NM66 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
LINC01548A6NM66 KRT16P3-201ENST00000439127 1283 ntBASIC18.17■□□□□ 0.5
LINC01548A6NM66 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
LINC01548A6NM66 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC18.17■□□□□ 0.5
LINC01548A6NM66 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
LINC01548A6NM66 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
LINC01548A6NM66 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
LINC01548A6NM66 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
LINC01548A6NM66 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC18.17■□□□□ 0.5
LINC01548A6NM66 AL022069.1-201ENST00000568025 1636 ntBASIC18.16■□□□□ 0.5
LINC01548A6NM66 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
LINC01548A6NM66 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
LINC01548A6NM66 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
LINC01548A6NM66 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC18.16■□□□□ 0.5
LINC01548A6NM66 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
LINC01548A6NM66 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC18.16■□□□□ 0.5
LINC01548A6NM66 MTDHP2-201ENST00000601468 714 ntBASIC18.16■□□□□ 0.5
LINC01548A6NM66 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
LINC01548A6NM66 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
LINC01548A6NM66 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC18.16■□□□□ 0.5
LINC01548A6NM66 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
LINC01548A6NM66 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC18.15■□□□□ 0.5
LINC01548A6NM66 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
LINC01548A6NM66 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
LINC01548A6NM66 LSM4-201ENST00000252816 986 ntTSL 2 BASIC18.15■□□□□ 0.5
LINC01548A6NM66 CLTA-206ENST00000466396 695 ntTSL 2 BASIC18.15■□□□□ 0.5
LINC01548A6NM66 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
LINC01548A6NM66 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC18.15■□□□□ 0.5
LINC01548A6NM66 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC18.15■□□□□ 0.5
LINC01548A6NM66 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC18.15■□□□□ 0.5
LINC01548A6NM66 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
LINC01548A6NM66 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC18.15■□□□□ 0.5
LINC01548A6NM66 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC18.14■□□□□ 0.5
LINC01548A6NM66 PREB-202ENST00000406567 1910 ntTSL 5 BASIC18.14■□□□□ 0.49
LINC01548A6NM66 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC18.14■□□□□ 0.49
LINC01548A6NM66 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
LINC01548A6NM66 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
LINC01548A6NM66 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
LINC01548A6NM66 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
LINC01548A6NM66 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
LINC01548A6NM66 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
LINC01548A6NM66 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC18.14■□□□□ 0.49
LINC01548A6NM66 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
LINC01548A6NM66 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC18.13■□□□□ 0.49
LINC01548A6NM66 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
LINC01548A6NM66 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
LINC01548A6NM66 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
LINC01548A6NM66 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
LINC01548A6NM66 LSM7-203ENST00000585409 512 ntTSL 2 BASIC18.13■□□□□ 0.49
LINC01548A6NM66 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC18.13■□□□□ 0.49
LINC01548A6NM66 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
LINC01548A6NM66 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC18.13■□□□□ 0.49
LINC01548A6NM66 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
LINC01548A6NM66 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC18.12■□□□□ 0.49
LINC01548A6NM66 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
LINC01548A6NM66 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
LINC01548A6NM66 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
LINC01548A6NM66 STK32C-205ENST00000456004 607 ntTSL 2 BASIC18.12■□□□□ 0.49
LINC01548A6NM66 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC18.12■□□□□ 0.49
LINC01548A6NM66 AC131212.1-201ENST00000613771 668 ntBASIC18.12■□□□□ 0.49
LINC01548A6NM66 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC18.12■□□□□ 0.49
LINC01548A6NM66 EXOG-217ENST00000630638 197 ntTSL 5 BASIC18.12■□□□□ 0.49
LINC01548A6NM66 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
LINC01548A6NM66 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
LINC01548A6NM66 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC18.12■□□□□ 0.49
LINC01548A6NM66 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
LINC01548A6NM66 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
LINC01548A6NM66 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
LINC01548A6NM66 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
LINC01548A6NM66 MIR6722-201ENST00000617286 78 ntBASIC18.11■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 13.6 ms