Protein–RNA interactions for Protein: A6NCI5

LINC00862, Putative transmembrane protein encoded by LINC00862, humanhuman

Predictions only

Length 91 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00862A6NCI5 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
LINC00862A6NCI5 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
LINC00862A6NCI5 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC18.84■□□□□ 0.61
LINC00862A6NCI5 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC18.84■□□□□ 0.61
LINC00862A6NCI5 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC18.84■□□□□ 0.61
LINC00862A6NCI5 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
LINC00862A6NCI5 NRGN-201ENST00000284292 1306 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
LINC00862A6NCI5 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC18.84■□□□□ 0.61
LINC00862A6NCI5 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
LINC00862A6NCI5 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
LINC00862A6NCI5 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
LINC00862A6NCI5 AC079848.1-201ENST00000511301 327 ntTSL 3 BASIC18.84■□□□□ 0.61
LINC00862A6NCI5 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC18.84■□□□□ 0.61
LINC00862A6NCI5 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
LINC00862A6NCI5 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
LINC00862A6NCI5 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
LINC00862A6NCI5 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
LINC00862A6NCI5 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.61
LINC00862A6NCI5 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
LINC00862A6NCI5 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
LINC00862A6NCI5 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.61
LINC00862A6NCI5 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
LINC00862A6NCI5 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
LINC00862A6NCI5 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC18.83■□□□□ 0.6
LINC00862A6NCI5 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
LINC00862A6NCI5 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
LINC00862A6NCI5 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
LINC00862A6NCI5 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
LINC00862A6NCI5 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
LINC00862A6NCI5 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
LINC00862A6NCI5 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
LINC00862A6NCI5 AC006077.2-201ENST00000623591 457 ntBASIC18.82■□□□□ 0.6
LINC00862A6NCI5 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
LINC00862A6NCI5 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
LINC00862A6NCI5 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
LINC00862A6NCI5 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC18.82■□□□□ 0.6
LINC00862A6NCI5 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
LINC00862A6NCI5 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
LINC00862A6NCI5 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
LINC00862A6NCI5 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC18.81■□□□□ 0.6
LINC00862A6NCI5 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC18.81■□□□□ 0.6
LINC00862A6NCI5 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
LINC00862A6NCI5 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
LINC00862A6NCI5 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
LINC00862A6NCI5 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
LINC00862A6NCI5 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
LINC00862A6NCI5 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
LINC00862A6NCI5 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
LINC00862A6NCI5 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
LINC00862A6NCI5 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC18.81■□□□□ 0.6
LINC00862A6NCI5 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
LINC00862A6NCI5 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC18.8■□□□□ 0.6
LINC00862A6NCI5 FBXW4P1-201ENST00000426721 2239 ntBASIC18.8■□□□□ 0.6
LINC00862A6NCI5 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC18.8■□□□□ 0.6
LINC00862A6NCI5 AL139393.1-201ENST00000417479 573 ntTSL 5 BASIC18.8■□□□□ 0.6
LINC00862A6NCI5 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
LINC00862A6NCI5 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
LINC00862A6NCI5 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
LINC00862A6NCI5 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
LINC00862A6NCI5 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
LINC00862A6NCI5 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC18.8■□□□□ 0.6
LINC00862A6NCI5 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC18.8■□□□□ 0.6
LINC00862A6NCI5 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
LINC00862A6NCI5 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC18.8■□□□□ 0.6
LINC00862A6NCI5 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
LINC00862A6NCI5 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
LINC00862A6NCI5 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
LINC00862A6NCI5 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
LINC00862A6NCI5 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC18.79■□□□□ 0.6
LINC00862A6NCI5 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
LINC00862A6NCI5 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
LINC00862A6NCI5 AC026310.3-201ENST00000625186 2373 ntBASIC18.79■□□□□ 0.6
LINC00862A6NCI5 CHPT1-201ENST00000229266 1585 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
LINC00862A6NCI5 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC18.79■□□□□ 0.6
LINC00862A6NCI5 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC18.79■□□□□ 0.6
LINC00862A6NCI5 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC18.79■□□□□ 0.6
LINC00862A6NCI5 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC18.78■□□□□ 0.6
LINC00862A6NCI5 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
LINC00862A6NCI5 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC18.78■□□□□ 0.6
LINC00862A6NCI5 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC18.78■□□□□ 0.6
LINC00862A6NCI5 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
LINC00862A6NCI5 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
LINC00862A6NCI5 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
LINC00862A6NCI5 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC18.77■□□□□ 0.6
LINC00862A6NCI5 GSTZ1-201ENST00000216465 1338 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
LINC00862A6NCI5 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
LINC00862A6NCI5 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC18.77■□□□□ 0.6
LINC00862A6NCI5 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
LINC00862A6NCI5 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
LINC00862A6NCI5 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
LINC00862A6NCI5 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
LINC00862A6NCI5 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
LINC00862A6NCI5 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
LINC00862A6NCI5 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
LINC00862A6NCI5 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
LINC00862A6NCI5 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC18.76■□□□□ 0.59
LINC00862A6NCI5 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
LINC00862A6NCI5 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
LINC00862A6NCI5 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC18.76■□□□□ 0.59
LINC00862A6NCI5 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 35.7 ms