Protein–RNA interactions for Protein: A0A1B0GVV1

SMIM35, Small integral membrane protein 35, humanhuman

Predictions only

Length 85 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM35A0A1B0GVV1 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC25.37■■□□□ 1.65
SMIM35A0A1B0GVV1 PBX2P1-201ENST00000493219 1291 ntBASIC25.37■■□□□ 1.65
SMIM35A0A1B0GVV1 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC25.37■■□□□ 1.65
SMIM35A0A1B0GVV1 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC25.36■■□□□ 1.65
SMIM35A0A1B0GVV1 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC25.36■■□□□ 1.65
SMIM35A0A1B0GVV1 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC25.36■■□□□ 1.65
SMIM35A0A1B0GVV1 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
SMIM35A0A1B0GVV1 MIR935-201ENST00000401179 91 ntBASIC25.36■■□□□ 1.65
SMIM35A0A1B0GVV1 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC25.36■■□□□ 1.65
SMIM35A0A1B0GVV1 SLC12A2-202ENST00000343225 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC25.36■■□□□ 1.65
SMIM35A0A1B0GVV1 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC25.36■■□□□ 1.65
SMIM35A0A1B0GVV1 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC25.35■■□□□ 1.65
SMIM35A0A1B0GVV1 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC25.35■■□□□ 1.65
SMIM35A0A1B0GVV1 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
SMIM35A0A1B0GVV1 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
SMIM35A0A1B0GVV1 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC25.35■■□□□ 1.65
SMIM35A0A1B0GVV1 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC25.35■■□□□ 1.65
SMIM35A0A1B0GVV1 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
SMIM35A0A1B0GVV1 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC25.35■■□□□ 1.65
SMIM35A0A1B0GVV1 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC25.35■■□□□ 1.65
SMIM35A0A1B0GVV1 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
SMIM35A0A1B0GVV1 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
SMIM35A0A1B0GVV1 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC25.34■■□□□ 1.65
SMIM35A0A1B0GVV1 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
SMIM35A0A1B0GVV1 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC25.34■■□□□ 1.65
SMIM35A0A1B0GVV1 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC25.34■■□□□ 1.65
SMIM35A0A1B0GVV1 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC25.34■■□□□ 1.65
SMIM35A0A1B0GVV1 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
SMIM35A0A1B0GVV1 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC25.34■■□□□ 1.65
SMIM35A0A1B0GVV1 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC25.34■■□□□ 1.65
SMIM35A0A1B0GVV1 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
SMIM35A0A1B0GVV1 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC25.33■■□□□ 1.65
SMIM35A0A1B0GVV1 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC25.33■■□□□ 1.65
SMIM35A0A1B0GVV1 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC25.33■■□□□ 1.65
SMIM35A0A1B0GVV1 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC25.33■■□□□ 1.65
SMIM35A0A1B0GVV1 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC25.33■■□□□ 1.65
SMIM35A0A1B0GVV1 AL136162.1-201ENST00000607711 1078 ntBASIC25.33■■□□□ 1.65
SMIM35A0A1B0GVV1 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC25.32■■□□□ 1.64
SMIM35A0A1B0GVV1 PAPD7-201ENST00000230859 5459 ntTSL 1 (best) BASIC25.32■■□□□ 1.64
SMIM35A0A1B0GVV1 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC25.32■■□□□ 1.64
SMIM35A0A1B0GVV1 ADGRB2-204ENST00000398542 5176 ntTSL 5 BASIC25.32■■□□□ 1.64
SMIM35A0A1B0GVV1 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
SMIM35A0A1B0GVV1 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC25.32■■□□□ 1.64
SMIM35A0A1B0GVV1 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC25.32■■□□□ 1.64
SMIM35A0A1B0GVV1 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC25.32■■□□□ 1.64
SMIM35A0A1B0GVV1 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC25.32■■□□□ 1.64
SMIM35A0A1B0GVV1 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC25.32■■□□□ 1.64
SMIM35A0A1B0GVV1 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC25.31■■□□□ 1.64
SMIM35A0A1B0GVV1 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
SMIM35A0A1B0GVV1 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC25.31■■□□□ 1.64
SMIM35A0A1B0GVV1 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC25.31■■□□□ 1.64
SMIM35A0A1B0GVV1 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
SMIM35A0A1B0GVV1 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC25.31■■□□□ 1.64
SMIM35A0A1B0GVV1 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC25.31■■□□□ 1.64
SMIM35A0A1B0GVV1 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC25.31■■□□□ 1.64
SMIM35A0A1B0GVV1 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC25.31■■□□□ 1.64
SMIM35A0A1B0GVV1 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC25.31■■□□□ 1.64
SMIM35A0A1B0GVV1 AL161729.1-201ENST00000604104 1402 ntBASIC25.3■■□□□ 1.64
SMIM35A0A1B0GVV1 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC25.3■■□□□ 1.64
SMIM35A0A1B0GVV1 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC25.3■■□□□ 1.64
SMIM35A0A1B0GVV1 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC25.3■■□□□ 1.64
SMIM35A0A1B0GVV1 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
SMIM35A0A1B0GVV1 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC25.3■■□□□ 1.64
SMIM35A0A1B0GVV1 AC135279.3-201ENST00000610945 1311 ntBASIC25.3■■□□□ 1.64
SMIM35A0A1B0GVV1 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
SMIM35A0A1B0GVV1 DUX4L19-201ENST00000557448 1267 ntBASIC25.29■■□□□ 1.64
SMIM35A0A1B0GVV1 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC25.29■■□□□ 1.64
SMIM35A0A1B0GVV1 CD37-213ENST00000598095 1598 ntTSL 2 BASIC25.29■■□□□ 1.64
SMIM35A0A1B0GVV1 ARHGEF7-205ENST00000375739 5375 ntTSL 1 (best) BASIC25.29■■□□□ 1.64
SMIM35A0A1B0GVV1 HLA-L-211ENST00000482052 1765 ntBASIC25.28■■□□□ 1.64
SMIM35A0A1B0GVV1 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC25.28■■□□□ 1.64
SMIM35A0A1B0GVV1 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC25.28■■□□□ 1.64
SMIM35A0A1B0GVV1 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC25.28■■□□□ 1.64
SMIM35A0A1B0GVV1 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC25.28■■□□□ 1.64
SMIM35A0A1B0GVV1 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
SMIM35A0A1B0GVV1 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC25.28■■□□□ 1.64
SMIM35A0A1B0GVV1 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC25.27■■□□□ 1.64
SMIM35A0A1B0GVV1 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC25.27■■□□□ 1.64
SMIM35A0A1B0GVV1 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC25.27■■□□□ 1.64
SMIM35A0A1B0GVV1 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC25.27■■□□□ 1.64
SMIM35A0A1B0GVV1 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
SMIM35A0A1B0GVV1 AC024257.2-201ENST00000549699 147 ntBASIC25.27■■□□□ 1.64
SMIM35A0A1B0GVV1 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC25.27■■□□□ 1.64
SMIM35A0A1B0GVV1 AL031432.3-201ENST00000607698 485 ntBASIC25.27■■□□□ 1.64
SMIM35A0A1B0GVV1 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC25.27■■□□□ 1.64
SMIM35A0A1B0GVV1 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
SMIM35A0A1B0GVV1 LZTS2-201ENST00000370220 5741 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
SMIM35A0A1B0GVV1 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
SMIM35A0A1B0GVV1 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC25.26■■□□□ 1.63
SMIM35A0A1B0GVV1 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC25.26■■□□□ 1.63
SMIM35A0A1B0GVV1 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC25.26■■□□□ 1.63
SMIM35A0A1B0GVV1 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC25.26■■□□□ 1.63
SMIM35A0A1B0GVV1 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC25.26■■□□□ 1.63
SMIM35A0A1B0GVV1 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC25.26■■□□□ 1.63
SMIM35A0A1B0GVV1 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC25.25■■□□□ 1.63
SMIM35A0A1B0GVV1 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
SMIM35A0A1B0GVV1 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC25.25■■□□□ 1.63
SMIM35A0A1B0GVV1 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC25.25■■□□□ 1.63
SMIM35A0A1B0GVV1 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC25.25■■□□□ 1.63
SMIM35A0A1B0GVV1 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC25.25■■□□□ 1.63
Retrieved 100 of 98,524 protein–RNA pairs in 19.8 ms