Protein–RNA interactions for Protein: A0A0B4J2F2

LOC102724428, SNF1-like kinase, isoform CRA_a, humanhuman

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LOC102724428A0A0B4J2F2 AC099791.1-201ENST00000416440 715 ntBASIC29.71■■■□□ 2.35
LOC102724428A0A0B4J2F2 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC29.71■■■□□ 2.35
LOC102724428A0A0B4J2F2 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC29.71■■■□□ 2.35
LOC102724428A0A0B4J2F2 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC29.71■■■□□ 2.35
LOC102724428A0A0B4J2F2 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC29.71■■■□□ 2.35
LOC102724428A0A0B4J2F2 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC29.71■■■□□ 2.35
LOC102724428A0A0B4J2F2 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC29.71■■■□□ 2.35
LOC102724428A0A0B4J2F2 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC29.71■■■□□ 2.35
LOC102724428A0A0B4J2F2 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC29.7■■■□□ 2.35
LOC102724428A0A0B4J2F2 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC29.7■■■□□ 2.35
LOC102724428A0A0B4J2F2 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC29.7■■■□□ 2.35
LOC102724428A0A0B4J2F2 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC29.7■■■□□ 2.34
LOC102724428A0A0B4J2F2 MAF-201ENST00000326043 2646 ntAPPRIS P3 TSL 1 (best) BASIC29.7■■■□□ 2.34
LOC102724428A0A0B4J2F2 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC29.69■■■□□ 2.34
LOC102724428A0A0B4J2F2 JTB-203ENST00000368589 1216 ntTSL 2 BASIC29.69■■■□□ 2.34
LOC102724428A0A0B4J2F2 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC29.69■■■□□ 2.34
LOC102724428A0A0B4J2F2 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC29.69■■■□□ 2.34
LOC102724428A0A0B4J2F2 PKM-203ENST00000389093 2279 ntTSL 5 BASIC29.69■■■□□ 2.34
LOC102724428A0A0B4J2F2 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC29.68■■■□□ 2.34
LOC102724428A0A0B4J2F2 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC29.68■■■□□ 2.34
LOC102724428A0A0B4J2F2 RHOF-204ENST00000537265 699 ntTSL 2 BASIC29.68■■■□□ 2.34
LOC102724428A0A0B4J2F2 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC29.68■■■□□ 2.34
LOC102724428A0A0B4J2F2 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC29.68■■■□□ 2.34
LOC102724428A0A0B4J2F2 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC29.68■■■□□ 2.34
LOC102724428A0A0B4J2F2 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC29.68■■■□□ 2.34
LOC102724428A0A0B4J2F2 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC29.67■■■□□ 2.34
LOC102724428A0A0B4J2F2 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC29.67■■■□□ 2.34
LOC102724428A0A0B4J2F2 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC29.67■■■□□ 2.34
LOC102724428A0A0B4J2F2 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC29.67■■■□□ 2.34
LOC102724428A0A0B4J2F2 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC29.67■■■□□ 2.34
LOC102724428A0A0B4J2F2 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC29.66■■■□□ 2.34
LOC102724428A0A0B4J2F2 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC29.66■■■□□ 2.34
LOC102724428A0A0B4J2F2 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC29.66■■■□□ 2.34
LOC102724428A0A0B4J2F2 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC29.66■■■□□ 2.34
LOC102724428A0A0B4J2F2 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC29.66■■■□□ 2.34
LOC102724428A0A0B4J2F2 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC29.66■■■□□ 2.34
LOC102724428A0A0B4J2F2 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC29.66■■■□□ 2.34
LOC102724428A0A0B4J2F2 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC29.66■■■□□ 2.34
LOC102724428A0A0B4J2F2 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC29.66■■■□□ 2.34
LOC102724428A0A0B4J2F2 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC29.65■■■□□ 2.34
LOC102724428A0A0B4J2F2 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC29.65■■■□□ 2.34
LOC102724428A0A0B4J2F2 STK32C-205ENST00000456004 607 ntTSL 2 BASIC29.65■■■□□ 2.34
LOC102724428A0A0B4J2F2 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC29.65■■■□□ 2.34
LOC102724428A0A0B4J2F2 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC29.64■■■□□ 2.34
LOC102724428A0A0B4J2F2 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC29.64■■■□□ 2.34
LOC102724428A0A0B4J2F2 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC29.64■■■□□ 2.34
LOC102724428A0A0B4J2F2 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC29.64■■■□□ 2.34
LOC102724428A0A0B4J2F2 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC29.64■■■□□ 2.34
LOC102724428A0A0B4J2F2 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC29.63■■■□□ 2.33
LOC102724428A0A0B4J2F2 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC29.63■■■□□ 2.33
LOC102724428A0A0B4J2F2 C17orf82-201ENST00000623772 1530 ntBASIC29.63■■■□□ 2.33
LOC102724428A0A0B4J2F2 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC29.63■■■□□ 2.33
LOC102724428A0A0B4J2F2 HES6-206ENST00000409574 738 ntTSL 2 BASIC29.63■■■□□ 2.33
LOC102724428A0A0B4J2F2 AC136469.2-201ENST00000623944 1028 ntBASIC29.63■■■□□ 2.33
LOC102724428A0A0B4J2F2 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC29.63■■■□□ 2.33
LOC102724428A0A0B4J2F2 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC29.63■■■□□ 2.33
LOC102724428A0A0B4J2F2 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC29.62■■■□□ 2.33
LOC102724428A0A0B4J2F2 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC29.62■■■□□ 2.33
LOC102724428A0A0B4J2F2 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC29.62■■■□□ 2.33
LOC102724428A0A0B4J2F2 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC29.62■■■□□ 2.33
LOC102724428A0A0B4J2F2 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC29.62■■■□□ 2.33
LOC102724428A0A0B4J2F2 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC29.61■■■□□ 2.33
LOC102724428A0A0B4J2F2 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC29.61■■■□□ 2.33
LOC102724428A0A0B4J2F2 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC29.61■■■□□ 2.33
LOC102724428A0A0B4J2F2 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC29.61■■■□□ 2.33
LOC102724428A0A0B4J2F2 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC29.61■■■□□ 2.33
LOC102724428A0A0B4J2F2 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC29.61■■■□□ 2.33
LOC102724428A0A0B4J2F2 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC29.6■■■□□ 2.33
LOC102724428A0A0B4J2F2 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC29.6■■■□□ 2.33
LOC102724428A0A0B4J2F2 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC29.6■■■□□ 2.33
LOC102724428A0A0B4J2F2 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC29.6■■■□□ 2.33
LOC102724428A0A0B4J2F2 TNIP2-201ENST00000315423 1974 ntAPPRIS P3 TSL 1 (best) BASIC29.6■■■□□ 2.33
LOC102724428A0A0B4J2F2 IHH-201ENST00000295731 2023 ntAPPRIS P1 TSL 1 (best) BASIC29.6■■■□□ 2.33
LOC102724428A0A0B4J2F2 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC29.6■■■□□ 2.33
LOC102724428A0A0B4J2F2 FZD2-201ENST00000315323 2112 ntAPPRIS P1 BASIC29.6■■■□□ 2.33
LOC102724428A0A0B4J2F2 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC29.59■■■□□ 2.33
LOC102724428A0A0B4J2F2 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC29.59■■■□□ 2.33
LOC102724428A0A0B4J2F2 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC29.59■■■□□ 2.33
LOC102724428A0A0B4J2F2 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC29.58■■■□□ 2.33
LOC102724428A0A0B4J2F2 AC006455.2-201ENST00000429931 906 ntBASIC29.58■■■□□ 2.33
LOC102724428A0A0B4J2F2 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC29.58■■■□□ 2.33
LOC102724428A0A0B4J2F2 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC29.58■■■□□ 2.33
LOC102724428A0A0B4J2F2 AC241377.3-202ENST00000626088 1088 ntBASIC29.58■■■□□ 2.33
LOC102724428A0A0B4J2F2 AC241585.3-202ENST00000628937 1088 ntBASIC29.58■■■□□ 2.33
LOC102724428A0A0B4J2F2 AC245100.8-202ENST00000629247 1058 ntBASIC29.58■■■□□ 2.33
LOC102724428A0A0B4J2F2 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC29.57■■■□□ 2.32
LOC102724428A0A0B4J2F2 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC29.57■■■□□ 2.32
LOC102724428A0A0B4J2F2 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC29.57■■■□□ 2.32
LOC102724428A0A0B4J2F2 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC29.57■■■□□ 2.32
LOC102724428A0A0B4J2F2 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC29.57■■■□□ 2.32
LOC102724428A0A0B4J2F2 SP2-202ENST00000613139 908 ntTSL 5 BASIC29.57■■■□□ 2.32
LOC102724428A0A0B4J2F2 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC29.56■■■□□ 2.32
LOC102724428A0A0B4J2F2 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC29.56■■■□□ 2.32
LOC102724428A0A0B4J2F2 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC29.56■■■□□ 2.32
LOC102724428A0A0B4J2F2 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC29.56■■■□□ 2.32
LOC102724428A0A0B4J2F2 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC29.56■■■□□ 2.32
LOC102724428A0A0B4J2F2 AC233992.3-201ENST00000607491 485 ntBASIC29.56■■■□□ 2.32
LOC102724428A0A0B4J2F2 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC29.55■■■□□ 2.32
LOC102724428A0A0B4J2F2 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC29.55■■■□□ 2.32
LOC102724428A0A0B4J2F2 MPST-208ENST00000628507 698 ntTSL 5 BASIC29.55■■■□□ 2.32
Retrieved 100 of 98,524 protein–RNA pairs in 14.2 ms