Protein–RNA interactions for Protein: A0A075B6T8

TRAV9-1, T-cell receptor alpha variable 9-1 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV9-1A0A075B6T8 RPS2-210ENST00000530225 765 ntTSL 2 BASIC17.32■□□□□ 0.36
TRAV9-1A0A075B6T8 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC17.32■□□□□ 0.36
TRAV9-1A0A075B6T8 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
TRAV9-1A0A075B6T8 HLA-L-211ENST00000482052 1765 ntBASIC17.32■□□□□ 0.36
TRAV9-1A0A075B6T8 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
TRAV9-1A0A075B6T8 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
TRAV9-1A0A075B6T8 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
TRAV9-1A0A075B6T8 AL137060.1-201ENST00000618151 2648 ntBASIC17.32■□□□□ 0.36
TRAV9-1A0A075B6T8 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC17.32■□□□□ 0.36
TRAV9-1A0A075B6T8 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
TRAV9-1A0A075B6T8 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
TRAV9-1A0A075B6T8 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
TRAV9-1A0A075B6T8 FGF3-201ENST00000334134 892 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TRAV9-1A0A075B6T8 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC17.31■□□□□ 0.36
TRAV9-1A0A075B6T8 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TRAV9-1A0A075B6T8 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC17.31■□□□□ 0.36
TRAV9-1A0A075B6T8 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TRAV9-1A0A075B6T8 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TRAV9-1A0A075B6T8 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
TRAV9-1A0A075B6T8 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC17.3■□□□□ 0.36
TRAV9-1A0A075B6T8 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
TRAV9-1A0A075B6T8 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
TRAV9-1A0A075B6T8 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TRAV9-1A0A075B6T8 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
TRAV9-1A0A075B6T8 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TRAV9-1A0A075B6T8 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC17.3■□□□□ 0.36
TRAV9-1A0A075B6T8 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
TRAV9-1A0A075B6T8 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC17.3■□□□□ 0.36
TRAV9-1A0A075B6T8 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TRAV9-1A0A075B6T8 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TRAV9-1A0A075B6T8 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
TRAV9-1A0A075B6T8 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC17.3■□□□□ 0.36
TRAV9-1A0A075B6T8 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TRAV9-1A0A075B6T8 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC17.29■□□□□ 0.36
TRAV9-1A0A075B6T8 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TRAV9-1A0A075B6T8 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
TRAV9-1A0A075B6T8 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TRAV9-1A0A075B6T8 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC17.29■□□□□ 0.36
TRAV9-1A0A075B6T8 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC17.29■□□□□ 0.36
TRAV9-1A0A075B6T8 ESRRAP2-201ENST00000418437 1549 ntBASIC17.29■□□□□ 0.36
TRAV9-1A0A075B6T8 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC17.29■□□□□ 0.36
TRAV9-1A0A075B6T8 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
TRAV9-1A0A075B6T8 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TRAV9-1A0A075B6T8 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TRAV9-1A0A075B6T8 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
TRAV9-1A0A075B6T8 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC17.29■□□□□ 0.36
TRAV9-1A0A075B6T8 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TRAV9-1A0A075B6T8 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TRAV9-1A0A075B6T8 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
TRAV9-1A0A075B6T8 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
TRAV9-1A0A075B6T8 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
TRAV9-1A0A075B6T8 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TRAV9-1A0A075B6T8 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TRAV9-1A0A075B6T8 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TRAV9-1A0A075B6T8 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TRAV9-1A0A075B6T8 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
TRAV9-1A0A075B6T8 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC17.28■□□□□ 0.36
TRAV9-1A0A075B6T8 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
TRAV9-1A0A075B6T8 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC17.28■□□□□ 0.36
TRAV9-1A0A075B6T8 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TRAV9-1A0A075B6T8 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TRAV9-1A0A075B6T8 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
TRAV9-1A0A075B6T8 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
TRAV9-1A0A075B6T8 BID-212ENST00000614949 1988 ntTSL 5 BASIC17.28■□□□□ 0.36
TRAV9-1A0A075B6T8 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC17.27■□□□□ 0.36
TRAV9-1A0A075B6T8 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
TRAV9-1A0A075B6T8 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC17.27■□□□□ 0.36
TRAV9-1A0A075B6T8 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
TRAV9-1A0A075B6T8 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
TRAV9-1A0A075B6T8 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
TRAV9-1A0A075B6T8 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
TRAV9-1A0A075B6T8 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
TRAV9-1A0A075B6T8 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC17.26■□□□□ 0.35
TRAV9-1A0A075B6T8 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC17.26■□□□□ 0.35
TRAV9-1A0A075B6T8 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TRAV9-1A0A075B6T8 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC17.26■□□□□ 0.35
TRAV9-1A0A075B6T8 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC17.26■□□□□ 0.35
TRAV9-1A0A075B6T8 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
TRAV9-1A0A075B6T8 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC17.26■□□□□ 0.35
TRAV9-1A0A075B6T8 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TRAV9-1A0A075B6T8 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC17.25■□□□□ 0.35
TRAV9-1A0A075B6T8 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TRAV9-1A0A075B6T8 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC17.25■□□□□ 0.35
TRAV9-1A0A075B6T8 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
TRAV9-1A0A075B6T8 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
TRAV9-1A0A075B6T8 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
TRAV9-1A0A075B6T8 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC17.25■□□□□ 0.35
TRAV9-1A0A075B6T8 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC17.25■□□□□ 0.35
TRAV9-1A0A075B6T8 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
TRAV9-1A0A075B6T8 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TRAV9-1A0A075B6T8 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC17.25■□□□□ 0.35
TRAV9-1A0A075B6T8 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TRAV9-1A0A075B6T8 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TRAV9-1A0A075B6T8 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
TRAV9-1A0A075B6T8 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TRAV9-1A0A075B6T8 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
TRAV9-1A0A075B6T8 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
TRAV9-1A0A075B6T8 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
TRAV9-1A0A075B6T8 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
TRAV9-1A0A075B6T8 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 16 ms