Protein–RNA interactions for Protein: Q9UHD9

UBQLN2, Ubiquilin-2, humanhuman

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN2Q9UHD9 KIF21B-204ENST00000461742 5428 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
UBQLN2Q9UHD9 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC12.88□□□□□ -0.35
UBQLN2Q9UHD9 ZNF778-202ENST00000433976 3608 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
UBQLN2Q9UHD9 HSD17B4-201ENST00000256216 2683 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
UBQLN2Q9UHD9 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
UBQLN2Q9UHD9 RIMBP2-201ENST00000261655 6321 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
UBQLN2Q9UHD9 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC12.88□□□□□ -0.35
UBQLN2Q9UHD9 SLC35G3-201ENST00000297307 2004 ntAPPRIS P1 BASIC12.88□□□□□ -0.35
UBQLN2Q9UHD9 UQCRFS1-201ENST00000304863 3475 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
UBQLN2Q9UHD9 TSEN2-202ENST00000402228 2149 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
UBQLN2Q9UHD9 IKZF1-202ENST00000343574 5925 ntTSL 5 BASIC12.88□□□□□ -0.35
UBQLN2Q9UHD9 GNPDA1-204ENST00000503794 2622 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
UBQLN2Q9UHD9 C19orf44-203ENST00000594035 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
UBQLN2Q9UHD9 OR2C3-204ENST00000641802 8509 ntAPPRIS P1 BASIC12.88□□□□□ -0.35
UBQLN2Q9UHD9 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
UBQLN2Q9UHD9 ACSL1-201ENST00000281455 3832 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
UBQLN2Q9UHD9 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC12.88□□□□□ -0.35
UBQLN2Q9UHD9 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC12.88□□□□□ -0.35
UBQLN2Q9UHD9 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC12.88□□□□□ -0.35
UBQLN2Q9UHD9 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC12.88□□□□□ -0.35
UBQLN2Q9UHD9 AC098831.1-202ENST00000438821 336 ntBASIC12.88□□□□□ -0.35
UBQLN2Q9UHD9 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC12.88□□□□□ -0.35
UBQLN2Q9UHD9 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC12.88□□□□□ -0.35
UBQLN2Q9UHD9 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC12.88□□□□□ -0.35
UBQLN2Q9UHD9 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC12.88□□□□□ -0.35
UBQLN2Q9UHD9 RPS15-207ENST00000591032 550 ntTSL 3 BASIC12.88□□□□□ -0.35
UBQLN2Q9UHD9 RPS15-212ENST00000593052 629 ntTSL 2 BASIC12.88□□□□□ -0.35
UBQLN2Q9UHD9 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
UBQLN2Q9UHD9 AL356488.2-201ENST00000602755 427 ntBASIC12.88□□□□□ -0.35
UBQLN2Q9UHD9 AL139424.1-201ENST00000607572 797 ntBASIC12.88□□□□□ -0.35
UBQLN2Q9UHD9 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC12.88□□□□□ -0.35
UBQLN2Q9UHD9 AC004706.3-202ENST00000621574 984 ntBASIC12.88□□□□□ -0.35
UBQLN2Q9UHD9 WDR26-201ENST00000414423 6872 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
UBQLN2Q9UHD9 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
UBQLN2Q9UHD9 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC12.88□□□□□ -0.35
UBQLN2Q9UHD9 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC12.88□□□□□ -0.35
UBQLN2Q9UHD9 KRT8P24-201ENST00000560290 1559 ntBASIC12.88□□□□□ -0.35
UBQLN2Q9UHD9 PGAP2-201ENST00000278243 2062 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
UBQLN2Q9UHD9 DHCR24-201ENST00000371269 4250 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
UBQLN2Q9UHD9 PTPRK-204ENST00000368210 5025 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
UBQLN2Q9UHD9 NTSR1-201ENST00000370501 4132 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
UBQLN2Q9UHD9 PLD1-201ENST00000331659 2906 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
UBQLN2Q9UHD9 SPATA7-217ENST00000556553 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
UBQLN2Q9UHD9 AC004754.1-201ENST00000600536 2242 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
UBQLN2Q9UHD9 LINC01225-202ENST00000562339 2113 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
UBQLN2Q9UHD9 AC131009.4-201ENST00000624048 1740 ntBASIC12.88□□□□□ -0.35
UBQLN2Q9UHD9 THSD7A-205ENST00000617773 10583 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
UBQLN2Q9UHD9 ANKRD30B-202ENST00000358984 4359 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
UBQLN2Q9UHD9 COL2A1-201ENST00000337299 4257 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
UBQLN2Q9UHD9 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC12.88□□□□□ -0.35
UBQLN2Q9UHD9 HNRNPLL-209ENST00000449105 4173 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
UBQLN2Q9UHD9 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
UBQLN2Q9UHD9 KCNMA1-216ENST00000457953 3976 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
UBQLN2Q9UHD9 TMEM63B-202ENST00000323267 3198 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
UBQLN2Q9UHD9 VASH2-202ENST00000366964 2960 ntTSL 5 BASIC12.87□□□□□ -0.35
UBQLN2Q9UHD9 RNH1-224ENST00000534797 2973 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
UBQLN2Q9UHD9 ADCYAP1R1-207ENST00000614107 6575 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
UBQLN2Q9UHD9 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
UBQLN2Q9UHD9 SGMS1-203ENST00000429490 3634 ntTSL 5 BASIC12.87□□□□□ -0.35
UBQLN2Q9UHD9 ROPN1B-202ENST00000504401 2050 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
UBQLN2Q9UHD9 BLOC1S6-212ENST00000566753 1996 ntTSL 2 BASIC12.87□□□□□ -0.35
UBQLN2Q9UHD9 AC106818.1-201ENST00000623223 3242 ntBASIC12.87□□□□□ -0.35
UBQLN2Q9UHD9 SESN3-203ENST00000536441 9558 ntAPPRIS P1 TSL 2 BASIC12.87□□□□□ -0.35
UBQLN2Q9UHD9 CBX3-202ENST00000396386 1857 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
UBQLN2Q9UHD9 ZDHHC8-203ENST00000405930 3112 ntTSL 2 BASIC12.87□□□□□ -0.35
UBQLN2Q9UHD9 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
UBQLN2Q9UHD9 PDIA4-201ENST00000286091 2903 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
UBQLN2Q9UHD9 NSD2-204ENST00000382891 7534 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
UBQLN2Q9UHD9 MED14-201ENST00000324817 7984 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
UBQLN2Q9UHD9 DGCR8-201ENST00000351989 4514 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
UBQLN2Q9UHD9 USP3-204ENST00000540797 5474 ntTSL 2 BASIC12.87□□□□□ -0.35
UBQLN2Q9UHD9 RASSF3-204ENST00000542104 3492 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
UBQLN2Q9UHD9 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC12.87□□□□□ -0.35
UBQLN2Q9UHD9 LINC01725-203ENST00000417975 3177 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
UBQLN2Q9UHD9 SHROOM1-203ENST00000378679 4019 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
UBQLN2Q9UHD9 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
UBQLN2Q9UHD9 TKFC-201ENST00000394900 4696 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
UBQLN2Q9UHD9 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
UBQLN2Q9UHD9 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC12.87□□□□□ -0.35
UBQLN2Q9UHD9 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC12.87□□□□□ -0.35
UBQLN2Q9UHD9 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC12.87□□□□□ -0.35
UBQLN2Q9UHD9 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
UBQLN2Q9UHD9 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC12.87□□□□□ -0.35
UBQLN2Q9UHD9 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC12.87□□□□□ -0.35
UBQLN2Q9UHD9 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC12.87□□□□□ -0.35
UBQLN2Q9UHD9 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC12.87□□□□□ -0.35
UBQLN2Q9UHD9 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC12.87□□□□□ -0.35
UBQLN2Q9UHD9 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC12.87□□□□□ -0.35
UBQLN2Q9UHD9 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
UBQLN2Q9UHD9 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
UBQLN2Q9UHD9 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC12.87□□□□□ -0.35
UBQLN2Q9UHD9 AC005593.1-201ENST00000624894 515 ntBASIC12.87□□□□□ -0.35
UBQLN2Q9UHD9 MFSD2B-201ENST00000338315 2850 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
UBQLN2Q9UHD9 EXOC3-201ENST00000315013 2682 ntAPPRIS P1 TSL 2 BASIC12.87□□□□□ -0.35
UBQLN2Q9UHD9 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC12.87□□□□□ -0.35
UBQLN2Q9UHD9 AC016245.1-201ENST00000570335 3204 ntTSL 2 BASIC12.87□□□□□ -0.35
UBQLN2Q9UHD9 NLRP7-207ENST00000590030 3209 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
UBQLN2Q9UHD9 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
UBQLN2Q9UHD9 LMBRD2-201ENST00000296603 8185 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
UBQLN2Q9UHD9 AL121827.1-201ENST00000370257 3264 ntTSL 2 BASIC12.87□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 33.2 ms