Protein–RNA interactions for Protein: Q9NXB0

MKS1, Meckel syndrome type 1 protein, humanhuman

Predictions only

Length 559 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1Q9NXB0 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC14.92□□□□□ -0.02
MKS1Q9NXB0 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
MKS1Q9NXB0 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
MKS1Q9NXB0 CYP1B1-AS1-201ENST00000413828 1781 ntTSL 5 BASIC14.92□□□□□ -0.02
MKS1Q9NXB0 TGFB1I1-214ENST00000567607 1770 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
MKS1Q9NXB0 RN7SL832P-201ENST00000607781 1756 ntBASIC14.92□□□□□ -0.02
MKS1Q9NXB0 BPI-201ENST00000262865 1874 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
MKS1Q9NXB0 GNAI2-201ENST00000266027 2169 ntTSL 2 BASIC14.92□□□□□ -0.02
MKS1Q9NXB0 AGBL3-202ENST00000435976 2495 ntTSL 5 BASIC14.92□□□□□ -0.02
MKS1Q9NXB0 WDR77-201ENST00000235090 2576 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
MKS1Q9NXB0 ZNF576-201ENST00000336564 2566 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
MKS1Q9NXB0 SMYD5-202ENST00000389501 2593 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
MKS1Q9NXB0 TRIM17-203ENST00000366697 2652 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
MKS1Q9NXB0 DNASE1L1-206ENST00000393638 2665 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
MKS1Q9NXB0 ARFGAP1-202ENST00000370275 3467 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
MKS1Q9NXB0 ERC1-219ENST00000546231 4390 ntTSL 5 BASIC14.92□□□□□ -0.02
MKS1Q9NXB0 FUS-201ENST00000254108 5119 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
MKS1Q9NXB0 SPRY2-201ENST00000377102 2708 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
MKS1Q9NXB0 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
MKS1Q9NXB0 TACR3-201ENST00000304883 5190 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
MKS1Q9NXB0 CPEB3-201ENST00000265997 4851 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
MKS1Q9NXB0 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC14.92□□□□□ -0.02
MKS1Q9NXB0 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
MKS1Q9NXB0 GAS2L1-209ENST00000618518 3382 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
MKS1Q9NXB0 ISPD-202ENST00000407010 5524 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
MKS1Q9NXB0 KCNN2-206ENST00000512097 3076 ntAPPRIS P2 TSL 5 BASIC14.91□□□□□ -0.02
MKS1Q9NXB0 GOLGA2-212ENST00000609374 2973 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
MKS1Q9NXB0 GGT5-202ENST00000327365 2494 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
MKS1Q9NXB0 FGR-204ENST00000399173 2483 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
MKS1Q9NXB0 ANO10-205ENST00000414522 2450 ntTSL 2 BASIC14.91□□□□□ -0.02
MKS1Q9NXB0 DSE-202ENST00000359564 4037 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
MKS1Q9NXB0 TRIM67-201ENST00000366653 3936 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
MKS1Q9NXB0 SOCS2-205ENST00000548537 3733 ntTSL 2 BASIC14.91□□□□□ -0.02
MKS1Q9NXB0 CENPO-202ENST00000380834 4386 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
MKS1Q9NXB0 ADAM15-203ENST00000356955 2949 ntAPPRIS P4 TSL 1 (best) BASIC14.91□□□□□ -0.02
MKS1Q9NXB0 VARS2-201ENST00000321897 4073 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
MKS1Q9NXB0 SYNGAP1-203ENST00000428982 4339 ntTSL 5 BASIC14.91□□□□□ -0.02
MKS1Q9NXB0 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC14.91□□□□□ -0.02
MKS1Q9NXB0 RERG-209ENST00000546331 1383 ntTSL 2 BASIC14.91□□□□□ -0.02
MKS1Q9NXB0 XKR5-201ENST00000618742 4893 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
MKS1Q9NXB0 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
MKS1Q9NXB0 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
MKS1Q9NXB0 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
MKS1Q9NXB0 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
MKS1Q9NXB0 AC114501.2-201ENST00000439631 535 ntBASIC14.91□□□□□ -0.02
MKS1Q9NXB0 MYADML-201ENST00000474610 2147 ntBASIC14.91□□□□□ -0.02
MKS1Q9NXB0 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC14.91□□□□□ -0.02
MKS1Q9NXB0 AC026410.3-201ENST00000514280 936 ntBASIC14.91□□□□□ -0.02
MKS1Q9NXB0 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC14.91□□□□□ -0.02
MKS1Q9NXB0 LY6E-204ENST00000519546 971 ntTSL 2 BASIC14.91□□□□□ -0.02
MKS1Q9NXB0 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
MKS1Q9NXB0 STRADA-221ENST00000582137 1238 ntTSL 2 BASIC14.91□□□□□ -0.02
MKS1Q9NXB0 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC14.91□□□□□ -0.02
MKS1Q9NXB0 METTL23-205ENST00000588302 925 ntTSL 5 BASIC14.91□□□□□ -0.02
MKS1Q9NXB0 AC073592.8-201ENST00000624126 511 ntBASIC14.91□□□□□ -0.02
MKS1Q9NXB0 PRSS30P-206ENST00000641773 873 ntBASIC14.91□□□□□ -0.02
MKS1Q9NXB0 ASPH-214ENST00000519234 2874 ntTSL 5 BASIC14.91□□□□□ -0.02
MKS1Q9NXB0 TUBA8-202ENST00000330423 2018 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
MKS1Q9NXB0 ILK-201ENST00000299421 1802 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
MKS1Q9NXB0 APP-205ENST00000358918 2366 ntTSL 5 BASIC14.91□□□□□ -0.02
MKS1Q9NXB0 SLCO2B1-203ENST00000428359 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
MKS1Q9NXB0 AC025171.1-202ENST00000499871 2271 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
MKS1Q9NXB0 ITSN1-210ENST00000399353 3913 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
MKS1Q9NXB0 MORC4-202ENST00000355610 3834 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
MKS1Q9NXB0 DDN-201ENST00000421952 3749 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
MKS1Q9NXB0 OR2I1P-209ENST00000641730 5365 ntBASIC14.91□□□□□ -0.02
MKS1Q9NXB0 HDAC9-208ENST00000417496 2524 ntTSL 2 BASIC14.91□□□□□ -0.02
MKS1Q9NXB0 IMPDH1-204ENST00000419067 2431 ntTSL 3 BASIC14.91□□□□□ -0.02
MKS1Q9NXB0 RAI14-202ENST00000428746 5064 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
MKS1Q9NXB0 AC087499.5-201ENST00000452760 1342 ntBASIC14.91□□□□□ -0.02
MKS1Q9NXB0 NEDD4-202ENST00000435532 5869 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
MKS1Q9NXB0 AC093520.1-201ENST00000567545 1767 ntTSL 5 BASIC14.9□□□□□ -0.02
MKS1Q9NXB0 ARHGEF6-202ENST00000370620 4764 ntTSL 2 BASIC14.9□□□□□ -0.02
MKS1Q9NXB0 AL138799.1-201ENST00000448213 1675 ntBASIC14.9□□□□□ -0.02
MKS1Q9NXB0 NAALADL1-202ENST00000355721 2100 ntTSL 5 BASIC14.9□□□□□ -0.02
MKS1Q9NXB0 CAMKK2-209ENST00000446440 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
MKS1Q9NXB0 SEPT7-201ENST00000350320 4350 ntAPPRIS P5 TSL 5 BASIC14.9□□□□□ -0.02
MKS1Q9NXB0 SAPCD2-201ENST00000409687 3848 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
MKS1Q9NXB0 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
MKS1Q9NXB0 RASGEF1A-202ENST00000374459 3264 ntAPPRIS ALT2 TSL 2 BASIC14.9□□□□□ -0.02
MKS1Q9NXB0 MFAP4-202ENST00000395592 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
MKS1Q9NXB0 XKR7-201ENST00000562532 7844 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
MKS1Q9NXB0 UCN2-201ENST00000273610 1481 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
MKS1Q9NXB0 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
MKS1Q9NXB0 TP53INP1-201ENST00000342697 5638 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
MKS1Q9NXB0 HDAC11-213ENST00000437379 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
MKS1Q9NXB0 BUB1B-PAK6-201ENST00000441369 2767 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
MKS1Q9NXB0 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
MKS1Q9NXB0 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
MKS1Q9NXB0 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
MKS1Q9NXB0 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
MKS1Q9NXB0 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
MKS1Q9NXB0 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC14.9□□□□□ -0.02
MKS1Q9NXB0 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC14.9□□□□□ -0.02
MKS1Q9NXB0 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC14.9□□□□□ -0.02
MKS1Q9NXB0 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC14.9□□□□□ -0.02
MKS1Q9NXB0 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC14.9□□□□□ -0.02
MKS1Q9NXB0 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
MKS1Q9NXB0 TIMM17BP1-201ENST00000545713 516 ntBASIC14.9□□□□□ -0.02
MKS1Q9NXB0 AC044860.1-202ENST00000559481 777 ntBASIC14.9□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 57.4 ms