Protein–RNA interactions for Protein: Q9NWW5

CLN6, Ceroid-lipofuscinosis neuronal protein 6, humanhuman

Predictions only

Length 311 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6Q9NWW5 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
CLN6Q9NWW5 KLHL9-201ENST00000359039 5710 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
CLN6Q9NWW5 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
CLN6Q9NWW5 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
CLN6Q9NWW5 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC13.88□□□□□ -0.19
CLN6Q9NWW5 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC13.88□□□□□ -0.19
CLN6Q9NWW5 CEMIP-202ENST00000356249 7297 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CLN6Q9NWW5 PLCXD2-201ENST00000393934 2063 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
CLN6Q9NWW5 CLCN6-201ENST00000312413 5631 ntTSL 2 BASIC13.87□□□□□ -0.19
CLN6Q9NWW5 MAOB-201ENST00000378069 2566 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CLN6Q9NWW5 AMMECR1-203ENST00000372059 3052 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
CLN6Q9NWW5 SEPT8-212ENST00000458488 1726 ntTSL 5 BASIC13.87□□□□□ -0.19
CLN6Q9NWW5 PARVB-201ENST00000338758 5429 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CLN6Q9NWW5 GIPC2-201ENST00000370759 3847 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CLN6Q9NWW5 PELP1-212ENST00000574876 3465 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
CLN6Q9NWW5 CLEC12A-AS1-201ENST00000420905 3956 ntTSL 2 BASIC13.87□□□□□ -0.19
CLN6Q9NWW5 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC13.87□□□□□ -0.19
CLN6Q9NWW5 BNIP3-201ENST00000368636 2861 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CLN6Q9NWW5 NAP1L1-202ENST00000393263 1896 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CLN6Q9NWW5 ADCY3-202ENST00000405392 4397 ntAPPRIS ALT1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CLN6Q9NWW5 LONP1-202ENST00000540670 3002 ntTSL 2 BASIC13.87□□□□□ -0.19
CLN6Q9NWW5 VILL-202ENST00000383759 2787 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
CLN6Q9NWW5 KCNG4-201ENST00000308251 5179 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CLN6Q9NWW5 NACC2-202ENST00000371753 6802 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CLN6Q9NWW5 NEDD4L-238ENST00000635997 4402 ntTSL 5 BASIC13.87□□□□□ -0.19
CLN6Q9NWW5 GDPGP1-202ENST00000558017 5323 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
CLN6Q9NWW5 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CLN6Q9NWW5 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CLN6Q9NWW5 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
CLN6Q9NWW5 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CLN6Q9NWW5 AC104457.1-201ENST00000401024 814 ntBASIC13.87□□□□□ -0.19
CLN6Q9NWW5 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CLN6Q9NWW5 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC13.87□□□□□ -0.19
CLN6Q9NWW5 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC13.87□□□□□ -0.19
CLN6Q9NWW5 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC13.87□□□□□ -0.19
CLN6Q9NWW5 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC13.87□□□□□ -0.19
CLN6Q9NWW5 PFN2-205ENST00000461868 613 ntTSL 2 BASIC13.87□□□□□ -0.19
CLN6Q9NWW5 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC13.87□□□□□ -0.19
CLN6Q9NWW5 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CLN6Q9NWW5 SLC25A39P2-201ENST00000537614 270 ntBASIC13.87□□□□□ -0.19
CLN6Q9NWW5 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC13.87□□□□□ -0.19
CLN6Q9NWW5 AC106730.1-201ENST00000566722 1090 ntBASIC13.87□□□□□ -0.19
CLN6Q9NWW5 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CLN6Q9NWW5 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC13.87□□□□□ -0.19
CLN6Q9NWW5 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC13.87□□□□□ -0.19
CLN6Q9NWW5 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
CLN6Q9NWW5 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC13.87□□□□□ -0.19
CLN6Q9NWW5 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
CLN6Q9NWW5 TSFM-207ENST00000540550 1935 ntTSL 2 BASIC13.87□□□□□ -0.19
CLN6Q9NWW5 PNPLA3-201ENST00000216180 2805 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CLN6Q9NWW5 SLC35D1-201ENST00000235345 6162 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CLN6Q9NWW5 PNMA1-201ENST00000316836 2590 ntAPPRIS P1 BASIC13.87□□□□□ -0.19
CLN6Q9NWW5 TMPRSS2-202ENST00000398585 3240 ntTSL 2 BASIC13.87□□□□□ -0.19
CLN6Q9NWW5 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC13.87□□□□□ -0.19
CLN6Q9NWW5 PRMT7-203ENST00000449359 2091 ntTSL 2 BASIC13.87□□□□□ -0.19
CLN6Q9NWW5 GPSM2-202ENST00000406462 7433 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
CLN6Q9NWW5 APBB3-201ENST00000354402 1810 ntTSL 5 BASIC13.87□□□□□ -0.19
CLN6Q9NWW5 AP3M2-201ENST00000174653 3661 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
CLN6Q9NWW5 VPS26B-201ENST00000281187 3691 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CLN6Q9NWW5 SMOC2-201ENST00000354536 3150 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
CLN6Q9NWW5 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC13.87□□□□□ -0.19
CLN6Q9NWW5 YTHDF2-201ENST00000373812 2925 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CLN6Q9NWW5 AC090099.1-203ENST00000527059 2945 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
CLN6Q9NWW5 SH3BP5L-201ENST00000366472 3861 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CLN6Q9NWW5 AC013460.1-202ENST00000435062 2253 ntTSL 2 BASIC13.87□□□□□ -0.19
CLN6Q9NWW5 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
CLN6Q9NWW5 GNB1L-201ENST00000329517 6706 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CLN6Q9NWW5 OPN4-202ENST00000372071 2401 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
CLN6Q9NWW5 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
CLN6Q9NWW5 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC13.86□□□□□ -0.19
CLN6Q9NWW5 NOTCH1-201ENST00000277541 9371 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CLN6Q9NWW5 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
CLN6Q9NWW5 TMEM209-202ENST00000462753 2322 ntAPPRIS ALT1 TSL 5 BASIC13.86□□□□□ -0.19
CLN6Q9NWW5 EIF5-202ENST00000392715 3417 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CLN6Q9NWW5 CCSER2-203ENST00000372088 7657 ntTSL 2 BASIC13.86□□□□□ -0.19
CLN6Q9NWW5 LILRP1-201ENST00000444199 1370 ntBASIC13.86□□□□□ -0.19
CLN6Q9NWW5 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CLN6Q9NWW5 MTMR9-201ENST00000221086 7481 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CLN6Q9NWW5 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CLN6Q9NWW5 POLL-204ENST00000370168 1536 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
CLN6Q9NWW5 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC13.86□□□□□ -0.19
CLN6Q9NWW5 ISY1-RAB43-201ENST00000418265 4868 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
CLN6Q9NWW5 TK1-203ENST00000588734 1681 ntTSL 2 BASIC13.86□□□□□ -0.19
CLN6Q9NWW5 HIST3H2BB-201ENST00000620438 2364 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
CLN6Q9NWW5 STOML1-206ENST00000561656 1833 ntTSL 3 BASIC13.86□□□□□ -0.19
CLN6Q9NWW5 COL25A1-201ENST00000399126 2674 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
CLN6Q9NWW5 NPR1-202ENST00000368680 4236 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CLN6Q9NWW5 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
CLN6Q9NWW5 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
CLN6Q9NWW5 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CLN6Q9NWW5 FKBP1B-201ENST00000380986 952 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CLN6Q9NWW5 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC13.86□□□□□ -0.19
CLN6Q9NWW5 AL353705.2-201ENST00000428243 662 ntBASIC13.86□□□□□ -0.19
CLN6Q9NWW5 ACTG1P14-201ENST00000446382 1122 ntBASIC13.86□□□□□ -0.19
CLN6Q9NWW5 TIMM8BP1-201ENST00000452384 211 ntBASIC13.86□□□□□ -0.19
CLN6Q9NWW5 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC13.86□□□□□ -0.19
CLN6Q9NWW5 AC036214.1-201ENST00000502766 2126 ntTSL 2 BASIC13.86□□□□□ -0.19
CLN6Q9NWW5 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC13.86□□□□□ -0.19
CLN6Q9NWW5 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC13.86□□□□□ -0.19
CLN6Q9NWW5 UBL5-208ENST00000593087 320 ntTSL 3 BASIC13.86□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 61.3 ms