Protein–RNA interactions for Protein: Q9GZT3

SLIRP, SRA stem-loop-interacting RNA-binding protein, mitochondrial, humanhuman

Known RBP Predictions only

Length 109 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRPQ9GZT3 PROKR1-201ENST00000303786 4273 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
SLIRPQ9GZT3 TRIM26-267ENST00000453195 3318 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
SLIRPQ9GZT3 FZD5-201ENST00000295417 6708 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
SLIRPQ9GZT3 GSN-209ENST00000449733 2702 ntTSL 2 BASIC13.3□□□□□ -0.28
SLIRPQ9GZT3 THY1-206ENST00000528522 2050 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
SLIRPQ9GZT3 AC092143.1-201ENST00000556922 2776 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
SLIRPQ9GZT3 AC135782.3-201ENST00000562782 2105 ntBASIC13.3□□□□□ -0.28
SLIRPQ9GZT3 IFT88-202ENST00000351808 2856 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
SLIRPQ9GZT3 NF1-204ENST00000431387 2889 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
SLIRPQ9GZT3 FUNDC2-201ENST00000369498 6455 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
SLIRPQ9GZT3 RUNX3-203ENST00000399916 4340 ntAPPRIS ALT2 TSL 2 BASIC13.3□□□□□ -0.28
SLIRPQ9GZT3 HNRNPLL-205ENST00000409636 3980 ntTSL 2 BASIC13.3□□□□□ -0.28
SLIRPQ9GZT3 TMUB2-215ENST00000592825 2151 ntTSL 3 BASIC13.3□□□□□ -0.28
SLIRPQ9GZT3 FAM155B-201ENST00000252338 4013 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
SLIRPQ9GZT3 NF2-205ENST00000361452 5884 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
SLIRPQ9GZT3 CLK3P2-201ENST00000427566 1453 ntBASIC13.29□□□□□ -0.28
SLIRPQ9GZT3 CPPED1-201ENST00000261660 1898 ntTSL 2 BASIC13.29□□□□□ -0.28
SLIRPQ9GZT3 ZBTB1-201ENST00000358738 4119 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
SLIRPQ9GZT3 EBLN3P-202ENST00000625445 4520 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
SLIRPQ9GZT3 ZNF202-207ENST00000530393 3564 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
SLIRPQ9GZT3 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
SLIRPQ9GZT3 MAP7-201ENST00000354570 4152 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
SLIRPQ9GZT3 FURIN-206ENST00000610579 4191 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
SLIRPQ9GZT3 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
SLIRPQ9GZT3 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
SLIRPQ9GZT3 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
SLIRPQ9GZT3 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
SLIRPQ9GZT3 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC13.29□□□□□ -0.28
SLIRPQ9GZT3 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
SLIRPQ9GZT3 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC13.29□□□□□ -0.28
SLIRPQ9GZT3 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC13.29□□□□□ -0.28
SLIRPQ9GZT3 PRSS29P-201ENST00000440800 595 ntBASIC13.29□□□□□ -0.28
SLIRPQ9GZT3 PFN2-205ENST00000461868 613 ntTSL 2 BASIC13.29□□□□□ -0.28
SLIRPQ9GZT3 AC105233.2-201ENST00000523697 349 ntBASIC13.29□□□□□ -0.28
SLIRPQ9GZT3 AF228730.5-201ENST00000530288 346 ntBASIC13.29□□□□□ -0.28
SLIRPQ9GZT3 SPIB-207ENST00000597855 564 ntTSL 4 BASIC13.29□□□□□ -0.28
SLIRPQ9GZT3 NPAP1P7-201ENST00000613027 823 ntBASIC13.29□□□□□ -0.28
SLIRPQ9GZT3 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC13.29□□□□□ -0.28
SLIRPQ9GZT3 NRROS-201ENST00000328557 2564 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
SLIRPQ9GZT3 PPP3R1-201ENST00000234310 3023 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
SLIRPQ9GZT3 FBXL18-201ENST00000382368 3498 ntAPPRIS P2 TSL 5 BASIC13.29□□□□□ -0.28
SLIRPQ9GZT3 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
SLIRPQ9GZT3 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
SLIRPQ9GZT3 KRT32-201ENST00000225899 1750 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
SLIRPQ9GZT3 SLCO4C1-201ENST00000310954 5334 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
SLIRPQ9GZT3 TUBB8-206ENST00000568584 1790 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
SLIRPQ9GZT3 SLC5A9-210ENST00000533824 2219 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
SLIRPQ9GZT3 AC022400.6-201ENST00000603027 5818 ntAPPRIS P5 TSL 2 BASIC13.29□□□□□ -0.28
SLIRPQ9GZT3 JOSD1-201ENST00000216039 3648 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
SLIRPQ9GZT3 RAB37-205ENST00000392614 2704 ntAPPRIS ALT2 TSL 2 BASIC13.29□□□□□ -0.28
SLIRPQ9GZT3 RUNX1-202ENST00000344691 7274 ntAPPRIS ALT1 TSL 1 (best) BASIC13.29□□□□□ -0.28
SLIRPQ9GZT3 PUDP-202ENST00000412827 1376 ntTSL 2 BASIC13.29□□□□□ -0.28
SLIRPQ9GZT3 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
SLIRPQ9GZT3 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC13.29□□□□□ -0.28
SLIRPQ9GZT3 WASHC5-202ENST00000517845 3667 ntTSL 2 BASIC13.29□□□□□ -0.28
SLIRPQ9GZT3 ZNF70-201ENST00000341976 6924 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
SLIRPQ9GZT3 CDS2-203ENST00000460006 9298 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
SLIRPQ9GZT3 SLC26A6-202ENST00000337000 2317 ntTSL 2 BASIC13.29□□□□□ -0.28
SLIRPQ9GZT3 PCED1B-201ENST00000432328 1862 ntAPPRIS P1 TSL 3 BASIC13.29□□□□□ -0.28
SLIRPQ9GZT3 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
SLIRPQ9GZT3 FUBP1-203ENST00000370768 2378 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
SLIRPQ9GZT3 TXNDC12-201ENST00000371626 2396 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
SLIRPQ9GZT3 RNF167-201ENST00000262482 1915 ntAPPRIS P3 TSL 2 BASIC13.29□□□□□ -0.28
SLIRPQ9GZT3 GUCY1B3-205ENST00000505764 2456 ntTSL 2 BASIC13.29□□□□□ -0.28
SLIRPQ9GZT3 CYP4F11-204ENST00000591841 2531 ntTSL 2 BASIC13.29□□□□□ -0.28
SLIRPQ9GZT3 TUBA8-202ENST00000330423 2018 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
SLIRPQ9GZT3 CPN2-202ENST00000429275 2008 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
SLIRPQ9GZT3 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC13.28□□□□□ -0.28
SLIRPQ9GZT3 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
SLIRPQ9GZT3 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC13.28□□□□□ -0.28
SLIRPQ9GZT3 LRP8-201ENST00000306052 7648 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
SLIRPQ9GZT3 ERVK13-1-207ENST00000569465 3321 ntTSL 2 BASIC13.28□□□□□ -0.28
SLIRPQ9GZT3 C5orf56-206ENST00000612967 2791 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
SLIRPQ9GZT3 SLC43A2-202ENST00000412517 1658 ntTSL 2 BASIC13.28□□□□□ -0.28
SLIRPQ9GZT3 FUK-202ENST00000378912 3925 ntTSL 2 BASIC13.28□□□□□ -0.28
SLIRPQ9GZT3 SLC7A7-201ENST00000285850 2263 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
SLIRPQ9GZT3 AL157996.1-201ENST00000624684 2299 ntBASIC13.28□□□□□ -0.28
SLIRPQ9GZT3 COL18A1-AS1-201ENST00000397787 3425 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
SLIRPQ9GZT3 TOLLIP-203ENST00000525159 3429 ntTSL 2 BASIC13.28□□□□□ -0.28
SLIRPQ9GZT3 ST7L-207ENST00000369669 1743 ntTSL 2 BASIC13.28□□□□□ -0.28
SLIRPQ9GZT3 DLGAP4-202ENST00000340491 2392 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
SLIRPQ9GZT3 PLA2G4B-201ENST00000452633 2985 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
SLIRPQ9GZT3 IL21R-204ENST00000564089 3009 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
SLIRPQ9GZT3 MYH7-201ENST00000355349 6087 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
SLIRPQ9GZT3 SEZ6-203ENST00000360295 4306 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
SLIRPQ9GZT3 MKLN1-203ENST00000421797 2460 ntTSL 2 BASIC13.28□□□□□ -0.28
SLIRPQ9GZT3 IFT81-201ENST00000242591 3108 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
SLIRPQ9GZT3 PRR29-202ENST00000412177 3127 ntAPPRIS P3 TSL 2 BASIC13.28□□□□□ -0.28
SLIRPQ9GZT3 PER2-201ENST00000254657 6385 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
SLIRPQ9GZT3 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
SLIRPQ9GZT3 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
SLIRPQ9GZT3 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
SLIRPQ9GZT3 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
SLIRPQ9GZT3 RNA5SP410-201ENST00000516285 106 ntBASIC13.28□□□□□ -0.28
SLIRPQ9GZT3 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
SLIRPQ9GZT3 SUOX-214ENST00000551841 906 ntTSL 3 BASIC13.28□□□□□ -0.28
SLIRPQ9GZT3 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC13.28□□□□□ -0.28
SLIRPQ9GZT3 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC13.28□□□□□ -0.28
SLIRPQ9GZT3 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC13.28□□□□□ -0.28
SLIRPQ9GZT3 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC13.28□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 34.4 ms