Protein–RNA interactions for Protein: Q99743

NPAS2, Neuronal PAS domain-containing protein 2, humanhuman

Predictions only

Length 824 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS2Q99743 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC14.89□□□□□ -0.03
NPAS2Q99743 TPCN1-214ENST00000550785 5345 ntTSL 2 BASIC14.89□□□□□ -0.03
NPAS2Q99743 ABCC10-201ENST00000244533 5088 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
NPAS2Q99743 FOSL2-201ENST00000264716 6708 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
NPAS2Q99743 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC14.89□□□□□ -0.03
NPAS2Q99743 BRAT1-201ENST00000340611 2915 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
NPAS2Q99743 LRRC41-201ENST00000343304 2947 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
NPAS2Q99743 AC090099.1-203ENST00000527059 2945 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
NPAS2Q99743 SLC6A20-204ENST00000456124 2662 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
NPAS2Q99743 MRGPRF-202ENST00000320913 705 ntTSL 2 BASIC14.89□□□□□ -0.03
NPAS2Q99743 OPA1-203ENST00000361715 6384 ntTSL 5 BASIC14.89□□□□□ -0.03
NPAS2Q99743 CRB3P1-201ENST00000449338 276 ntBASIC14.89□□□□□ -0.03
NPAS2Q99743 RN7SL618P-201ENST00000477850 296 ntBASIC14.89□□□□□ -0.03
NPAS2Q99743 SLC25A30-AS1-201ENST00000506633 701 ntTSL 3 BASIC14.89□□□□□ -0.03
NPAS2Q99743 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC14.89□□□□□ -0.03
NPAS2Q99743 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
NPAS2Q99743 AC190387.1-201ENST00000551683 408 ntBASIC14.89□□□□□ -0.03
NPAS2Q99743 AC044860.1-202ENST00000559481 777 ntBASIC14.89□□□□□ -0.03
NPAS2Q99743 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC14.89□□□□□ -0.03
NPAS2Q99743 ELOF1-205ENST00000589171 743 ntTSL 3 BASIC14.89□□□□□ -0.03
NPAS2Q99743 MINPP1-202ENST00000371996 2415 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
NPAS2Q99743 TRMT1-217ENST00000592062 2579 ntAPPRIS P3 TSL 5 BASIC14.89□□□□□ -0.03
NPAS2Q99743 MYH6-202ENST00000405093 5941 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
NPAS2Q99743 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
NPAS2Q99743 CAMK2D-205ENST00000394524 5294 ntAPPRIS ALT1 TSL 2 BASIC14.89□□□□□ -0.03
NPAS2Q99743 LMX1B-201ENST00000355497 5809 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
NPAS2Q99743 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
NPAS2Q99743 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC14.89□□□□□ -0.03
NPAS2Q99743 CDS2-203ENST00000460006 9298 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
NPAS2Q99743 ZFAND6-222ENST00000613266 1729 ntAPPRIS P1 TSL 3 BASIC14.89□□□□□ -0.03
NPAS2Q99743 DDN-201ENST00000421952 3749 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
NPAS2Q99743 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC14.89□□□□□ -0.03
NPAS2Q99743 TTC7A-202ENST00000394850 4306 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
NPAS2Q99743 CSRNP2-201ENST00000228515 4471 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
NPAS2Q99743 AHCYL2-202ENST00000446544 5026 ntAPPRIS ALT1 TSL 1 (best) BASIC14.88□□□□□ -0.03
NPAS2Q99743 LRIG3-201ENST00000320743 4070 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
NPAS2Q99743 SLC34A2-202ENST00000503434 2174 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
NPAS2Q99743 TGOLN2-203ENST00000398263 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
NPAS2Q99743 FGR-203ENST00000374005 2729 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
NPAS2Q99743 PORCN-201ENST00000326194 1755 ntAPPRIS P4 TSL 1 (best) BASIC14.88□□□□□ -0.03
NPAS2Q99743 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC14.88□□□□□ -0.03
NPAS2Q99743 TSPAN18-207ENST00000520358 3316 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
NPAS2Q99743 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
NPAS2Q99743 LTA-214ENST00000454783 1507 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
NPAS2Q99743 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
NPAS2Q99743 SLC4A7-212ENST00000446700 4000 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
NPAS2Q99743 ARNT2-209ENST00000622346 2932 ntTSL 2 BASIC14.88□□□□□ -0.03
NPAS2Q99743 PLCB3-202ENST00000325234 3946 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
NPAS2Q99743 TMPRSS2-202ENST00000398585 3240 ntTSL 2 BASIC14.88□□□□□ -0.03
NPAS2Q99743 FYTTD1-201ENST00000241502 6866 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
NPAS2Q99743 SLC35E2B-203ENST00000611123 5948 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
NPAS2Q99743 NME3-201ENST00000219302 1069 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
NPAS2Q99743 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
NPAS2Q99743 FGFR1-201ENST00000326324 3816 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
NPAS2Q99743 FGFR1-204ENST00000356207 3824 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
NPAS2Q99743 LCE3E-201ENST00000368789 611 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
NPAS2Q99743 MORN4-202ENST00000370635 419 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
NPAS2Q99743 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
NPAS2Q99743 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC14.88□□□□□ -0.03
NPAS2Q99743 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC14.88□□□□□ -0.03
NPAS2Q99743 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
NPAS2Q99743 AC139713.2-206ENST00000499587 566 ntTSL 4 BASIC14.88□□□□□ -0.03
NPAS2Q99743 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
NPAS2Q99743 SPDYE18-201ENST00000510091 1050 ntBASIC14.88□□□□□ -0.03
NPAS2Q99743 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
NPAS2Q99743 AL033527.5-202ENST00000641632 1098 ntBASIC14.88□□□□□ -0.03
NPAS2Q99743 C3-201ENST00000245907 5263 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
NPAS2Q99743 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
NPAS2Q99743 PPIL6-202ENST00000424445 4031 ntTSL 5 BASIC14.88□□□□□ -0.03
NPAS2Q99743 FLII-201ENST00000327031 4338 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
NPAS2Q99743 NOX3-201ENST00000159060 2042 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
NPAS2Q99743 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
NPAS2Q99743 ADGRG2-207ENST00000379869 4768 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
NPAS2Q99743 AC239800.3-201ENST00000424684 5243 ntTSL 5 BASIC14.88□□□□□ -0.03
NPAS2Q99743 AFAP1L1-205ENST00000515000 2319 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
NPAS2Q99743 ACE-201ENST00000290863 2479 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
NPAS2Q99743 CLCNKA-201ENST00000331433 2475 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
NPAS2Q99743 CHRNB4-201ENST00000261751 2623 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
NPAS2Q99743 FANCG-201ENST00000378643 2631 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
NPAS2Q99743 TSPAN12-201ENST00000222747 2798 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
NPAS2Q99743 ZNF596-201ENST00000308811 2783 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
NPAS2Q99743 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
NPAS2Q99743 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC14.88□□□□□ -0.03
NPAS2Q99743 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
NPAS2Q99743 MAU2-201ENST00000262815 4994 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
NPAS2Q99743 BNIP3-201ENST00000368636 2861 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
NPAS2Q99743 HNRNPH1-201ENST00000329433 2114 ntTSL 2 BASIC14.87□□□□□ -0.03
NPAS2Q99743 TM4SF19-AS1-203ENST00000452051 1829 ntTSL 2 BASIC14.87□□□□□ -0.03
NPAS2Q99743 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC14.87□□□□□ -0.03
NPAS2Q99743 TFCP2-201ENST00000257915 3546 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
NPAS2Q99743 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
NPAS2Q99743 IRF4-201ENST00000380956 5331 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
NPAS2Q99743 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
NPAS2Q99743 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
NPAS2Q99743 COPE-202ENST00000349893 948 ntTSL 2 BASIC14.87□□□□□ -0.03
NPAS2Q99743 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
NPAS2Q99743 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
NPAS2Q99743 HIST3H2BA-201ENST00000436555 524 ntBASIC14.87□□□□□ -0.03
NPAS2Q99743 FYCO1-203ENST00000438446 1072 ntTSL 5 BASIC14.87□□□□□ -0.03
NPAS2Q99743 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC14.87□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 35.5 ms