Protein–RNA interactions for Protein: Q96SN8

CDK5RAP2, CDK5 regulatory subunit-associated protein 2, humanhuman

Predictions only

Length 1,893 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP2Q96SN8 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CDK5RAP2Q96SN8 MSI2-202ENST00000322684 1860 ntAPPRIS ALT2 TSL 2 BASIC17.4■□□□□ 0.38
CDK5RAP2Q96SN8 P2RX5-207ENST00000551178 1863 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CDK5RAP2Q96SN8 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CDK5RAP2Q96SN8 PACSIN2-201ENST00000263246 3249 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CDK5RAP2Q96SN8 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
CDK5RAP2Q96SN8 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CDK5RAP2Q96SN8 DIAPH2-202ENST00000355827 3782 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
CDK5RAP2Q96SN8 HYMAI-201ENST00000635591 3347 ntBASIC17.4■□□□□ 0.38
CDK5RAP2Q96SN8 WDR5-201ENST00000358625 3151 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CDK5RAP2Q96SN8 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC17.4■□□□□ 0.38
CDK5RAP2Q96SN8 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
CDK5RAP2Q96SN8 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CDK5RAP2Q96SN8 PAX7-202ENST00000400661 1700 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CDK5RAP2Q96SN8 OR1J1-201ENST00000259357 969 ntAPPRIS P1 BASIC17.39■□□□□ 0.38
CDK5RAP2Q96SN8 EDF1-202ENST00000371648 809 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
CDK5RAP2Q96SN8 RPL3-202ENST00000401609 1289 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
CDK5RAP2Q96SN8 AL450469.2-201ENST00000427132 499 ntTSL 3 BASIC17.39■□□□□ 0.38
CDK5RAP2Q96SN8 DLGAP4-AS1-202ENST00000433238 593 ntTSL 3 BASIC17.39■□□□□ 0.38
CDK5RAP2Q96SN8 HVCN1-203ENST00000439744 1215 ntTSL 2 BASIC17.39■□□□□ 0.38
CDK5RAP2Q96SN8 AC093627.5-203ENST00000497320 746 ntTSL 2 BASIC17.39■□□□□ 0.38
CDK5RAP2Q96SN8 CD164-210ENST00000512821 964 ntTSL 2 BASIC17.39■□□□□ 0.38
CDK5RAP2Q96SN8 IGLV3-15-201ENST00000518356 244 ntBASIC17.39■□□□□ 0.38
CDK5RAP2Q96SN8 AC079328.1-201ENST00000560358 952 ntBASIC17.39■□□□□ 0.38
CDK5RAP2Q96SN8 AC026803.1-201ENST00000569130 274 ntBASIC17.39■□□□□ 0.38
CDK5RAP2Q96SN8 MIR4754-201ENST00000582477 89 ntBASIC17.39■□□□□ 0.38
CDK5RAP2Q96SN8 ACP7-202ENST00000594229 1149 ntTSL 5 BASIC17.39■□□□□ 0.38
CDK5RAP2Q96SN8 AC128714.1-201ENST00000637035 887 ntBASIC17.39■□□□□ 0.38
CDK5RAP2Q96SN8 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC17.39■□□□□ 0.38
CDK5RAP2Q96SN8 G6PD-201ENST00000369620 1799 ntTSL 5 BASIC17.39■□□□□ 0.38
CDK5RAP2Q96SN8 SUPT4H1-201ENST00000225504 1489 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CDK5RAP2Q96SN8 DUOXA1-210ENST00000559014 1965 ntTSL 2 BASIC17.39■□□□□ 0.37
CDK5RAP2Q96SN8 SLC26A11-203ENST00000546047 2807 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CDK5RAP2Q96SN8 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC17.39■□□□□ 0.37
CDK5RAP2Q96SN8 F2-201ENST00000311907 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CDK5RAP2Q96SN8 KAT5-216ENST00000534650 1875 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CDK5RAP2Q96SN8 CLDN22-201ENST00000323319 2581 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
CDK5RAP2Q96SN8 TCL1A-203ENST00000554012 1391 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CDK5RAP2Q96SN8 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CDK5RAP2Q96SN8 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CDK5RAP2Q96SN8 PIGC-201ENST00000344529 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CDK5RAP2Q96SN8 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CDK5RAP2Q96SN8 HOGA1-203ENST00000370647 1999 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CDK5RAP2Q96SN8 IGHV4-39-201ENST00000390619 425 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
CDK5RAP2Q96SN8 CMC1-204ENST00000423894 549 ntTSL 2 BASIC17.39■□□□□ 0.37
CDK5RAP2Q96SN8 GHRHR-212ENST00000611037 923 ntTSL 5 BASIC17.39■□□□□ 0.37
CDK5RAP2Q96SN8 AC234782.2-201ENST00000614615 1240 ntTSL 2 BASIC17.39■□□□□ 0.37
CDK5RAP2Q96SN8 AC009053.1-204ENST00000429810 2355 ntTSL 2 BASIC17.39■□□□□ 0.37
CDK5RAP2Q96SN8 MAGEA2-203ENST00000611557 2024 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
CDK5RAP2Q96SN8 F10-203ENST00000409306 1450 ntTSL 3 BASIC17.39■□□□□ 0.37
CDK5RAP2Q96SN8 NFYA-202ENST00000353205 1660 ntTSL 5 BASIC17.39■□□□□ 0.37
CDK5RAP2Q96SN8 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
CDK5RAP2Q96SN8 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CDK5RAP2Q96SN8 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CDK5RAP2Q96SN8 CCDC32-201ENST00000358005 1704 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
CDK5RAP2Q96SN8 FAM160B1-203ENST00000369250 2870 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CDK5RAP2Q96SN8 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
CDK5RAP2Q96SN8 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CDK5RAP2Q96SN8 TEAD3-202ENST00000402886 2729 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CDK5RAP2Q96SN8 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
CDK5RAP2Q96SN8 CALD1-222ENST00000495522 2199 ntTSL 5 BASIC17.38■□□□□ 0.37
CDK5RAP2Q96SN8 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CDK5RAP2Q96SN8 SPAG6-201ENST00000313311 2421 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CDK5RAP2Q96SN8 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC17.38■□□□□ 0.37
CDK5RAP2Q96SN8 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CDK5RAP2Q96SN8 TOMM34-201ENST00000372813 2062 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CDK5RAP2Q96SN8 CBX3-202ENST00000396386 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CDK5RAP2Q96SN8 KCNN3-202ENST00000358505 1658 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CDK5RAP2Q96SN8 POR-201ENST00000394893 2532 ntTSL 5 BASIC17.38■□□□□ 0.37
CDK5RAP2Q96SN8 LETMD1-201ENST00000262055 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CDK5RAP2Q96SN8 NCR3-202ENST00000376071 541 ntTSL 5 BASIC17.38■□□□□ 0.37
CDK5RAP2Q96SN8 GGCT-203ENST00000409144 836 ntTSL 2 BASIC17.38■□□□□ 0.37
CDK5RAP2Q96SN8 LETMD1-203ENST00000418425 2123 ntTSL 2 BASIC17.38■□□□□ 0.37
CDK5RAP2Q96SN8 AL606489.1-201ENST00000443515 486 ntTSL 3 BASIC17.38■□□□□ 0.37
CDK5RAP2Q96SN8 SZRD1-203ENST00000471507 892 ntAPPRIS ALT1 TSL 2 BASIC17.38■□□□□ 0.37
CDK5RAP2Q96SN8 GGCT-201ENST00000005374 1032 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CDK5RAP2Q96SN8 SHBG-207ENST00000570547 801 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CDK5RAP2Q96SN8 ALKBH7-202ENST00000596657 603 ntTSL 2 BASIC17.38■□□□□ 0.37
CDK5RAP2Q96SN8 AC138894.2-201ENST00000602838 371 ntBASIC17.38■□□□□ 0.37
CDK5RAP2Q96SN8 AC009884.2-201ENST00000603110 324 ntBASIC17.38■□□□□ 0.37
CDK5RAP2Q96SN8 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC17.38■□□□□ 0.37
CDK5RAP2Q96SN8 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
CDK5RAP2Q96SN8 BX005266.2-201ENST00000450704 1549 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CDK5RAP2Q96SN8 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC17.38■□□□□ 0.37
CDK5RAP2Q96SN8 EBP-205ENST00000495186 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CDK5RAP2Q96SN8 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CDK5RAP2Q96SN8 BRAT1-201ENST00000340611 2915 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CDK5RAP2Q96SN8 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC17.38■□□□□ 0.37
CDK5RAP2Q96SN8 AC006262.1-203ENST00000598170 1634 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CDK5RAP2Q96SN8 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CDK5RAP2Q96SN8 KIAA1614-AS1-201ENST00000415647 1440 ntTSL 2 BASIC17.38■□□□□ 0.37
CDK5RAP2Q96SN8 AL358216.1-201ENST00000451601 1657 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CDK5RAP2Q96SN8 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CDK5RAP2Q96SN8 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
CDK5RAP2Q96SN8 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
CDK5RAP2Q96SN8 RAN-210ENST00000541630 1475 ntTSL 2 BASIC17.38■□□□□ 0.37
CDK5RAP2Q96SN8 HSD17B6-207ENST00000555805 1722 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
CDK5RAP2Q96SN8 ZNF587-203ENST00000423137 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
CDK5RAP2Q96SN8 PDZD3-212ENST00000531114 2996 ntTSL 2 BASIC17.38■□□□□ 0.37
CDK5RAP2Q96SN8 FBXL7-203ENST00000510662 1758 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 60.9 ms