Protein–RNA interactions for Protein: Q96LD4

TRIM47, Tripartite motif-containing protein 47, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47Q96LD4 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
TRIM47Q96LD4 ZMIZ2-202ENST00000309315 5144 ntAPPRIS P4 TSL 2 BASIC17.7■□□□□ 0.42
TRIM47Q96LD4 CPA5-201ENST00000393213 1444 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
TRIM47Q96LD4 TCF7-218ENST00000520958 1408 ntTSL 2 BASIC17.7■□□□□ 0.42
TRIM47Q96LD4 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
TRIM47Q96LD4 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
TRIM47Q96LD4 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC17.7■□□□□ 0.42
TRIM47Q96LD4 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
TRIM47Q96LD4 CASR-202ENST00000498619 5009 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
TRIM47Q96LD4 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
TRIM47Q96LD4 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
TRIM47Q96LD4 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
TRIM47Q96LD4 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC17.69■□□□□ 0.42
TRIM47Q96LD4 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC17.69■□□□□ 0.42
TRIM47Q96LD4 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
TRIM47Q96LD4 KCNS1-201ENST00000306117 4538 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TRIM47Q96LD4 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
TRIM47Q96LD4 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TRIM47Q96LD4 EIF4G1-203ENST00000350481 4990 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
TRIM47Q96LD4 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
TRIM47Q96LD4 PTPRU-201ENST00000345512 4470 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TRIM47Q96LD4 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
TRIM47Q96LD4 SMS-201ENST00000379404 1174 ntTSL 3 BASIC17.69■□□□□ 0.42
TRIM47Q96LD4 AC016825.1-201ENST00000433600 778 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
TRIM47Q96LD4 FTLP1-201ENST00000449155 526 ntBASIC17.69■□□□□ 0.42
TRIM47Q96LD4 AC124301.1-201ENST00000524885 602 ntTSL 3 BASIC17.69■□□□□ 0.42
TRIM47Q96LD4 AL136309.4-201ENST00000527831 640 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
TRIM47Q96LD4 MIR3907-201ENST00000579424 151 ntBASIC17.69■□□□□ 0.42
TRIM47Q96LD4 KLK11-210ENST00000600362 759 ntTSL 3 BASIC17.69■□□□□ 0.42
TRIM47Q96LD4 CCL5-202ENST00000605140 1244 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
TRIM47Q96LD4 AC244157.2-201ENST00000616239 1006 ntBASIC17.69■□□□□ 0.42
TRIM47Q96LD4 ZNF596-213ENST00000640035 1163 ntTSL 5 BASIC17.69■□□□□ 0.42
TRIM47Q96LD4 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
TRIM47Q96LD4 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC17.69■□□□□ 0.42
TRIM47Q96LD4 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TRIM47Q96LD4 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
TRIM47Q96LD4 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TRIM47Q96LD4 PLAGL1-206ENST00000416623 3237 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TRIM47Q96LD4 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC17.69■□□□□ 0.42
TRIM47Q96LD4 TMBIM7P-203ENST00000641617 1718 ntBASIC17.69■□□□□ 0.42
TRIM47Q96LD4 AC087481.3-201ENST00000602886 1894 ntBASIC17.69■□□□□ 0.42
TRIM47Q96LD4 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC17.69■□□□□ 0.42
TRIM47Q96LD4 GSN-206ENST00000394353 2311 ntTSL 2 BASIC17.69■□□□□ 0.42
TRIM47Q96LD4 HELZ2-202ENST00000427522 7827 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
TRIM47Q96LD4 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
TRIM47Q96LD4 XK-201ENST00000378616 5206 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TRIM47Q96LD4 MLKL-202ENST00000308807 2523 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
TRIM47Q96LD4 MAX-205ENST00000358664 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TRIM47Q96LD4 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TRIM47Q96LD4 IL6ST-209ENST00000502326 3007 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
TRIM47Q96LD4 ANGPTL8-201ENST00000252453 872 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TRIM47Q96LD4 THOC6-201ENST00000253952 1246 ntTSL 2 BASIC17.68■□□□□ 0.42
TRIM47Q96LD4 RPP40-201ENST00000319533 1088 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
TRIM47Q96LD4 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TRIM47Q96LD4 PFDN6-202ENST00000374607 598 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
TRIM47Q96LD4 PFDN6-203ENST00000374610 521 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
TRIM47Q96LD4 RPL17P11-201ENST00000417593 544 ntBASIC17.68■□□□□ 0.42
TRIM47Q96LD4 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC17.68■□□□□ 0.42
TRIM47Q96LD4 GDAP1-202ENST00000434412 1228 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
TRIM47Q96LD4 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
TRIM47Q96LD4 PGRMC2-206ENST00000512483 1144 ntTSL 5 BASIC17.68■□□□□ 0.42
TRIM47Q96LD4 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TRIM47Q96LD4 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
TRIM47Q96LD4 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC17.68■□□□□ 0.42
TRIM47Q96LD4 AC007342.4-201ENST00000566383 584 ntTSL 4 BASIC17.68■□□□□ 0.42
TRIM47Q96LD4 FAAP24-204ENST00000590179 784 ntTSL 2 BASIC17.68■□□□□ 0.42
TRIM47Q96LD4 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
TRIM47Q96LD4 AC008537.4-201ENST00000595728 1103 ntTSL 5 BASIC17.68■□□□□ 0.42
TRIM47Q96LD4 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC17.68■□□□□ 0.42
TRIM47Q96LD4 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
TRIM47Q96LD4 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC17.68■□□□□ 0.42
TRIM47Q96LD4 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
TRIM47Q96LD4 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TRIM47Q96LD4 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
TRIM47Q96LD4 TUBBP5-203ENST00000508529 1334 ntBASIC17.68■□□□□ 0.42
TRIM47Q96LD4 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC17.68■□□□□ 0.42
TRIM47Q96LD4 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
TRIM47Q96LD4 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TRIM47Q96LD4 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TRIM47Q96LD4 PTPRO-202ENST00000348962 5061 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
TRIM47Q96LD4 ZSWIM8-201ENST00000398706 6062 ntTSL 2 BASIC17.67■□□□□ 0.42
TRIM47Q96LD4 SIN3B-202ENST00000379803 5129 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
TRIM47Q96LD4 AHDC1-201ENST00000247087 6334 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
TRIM47Q96LD4 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC17.67■□□□□ 0.42
TRIM47Q96LD4 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
TRIM47Q96LD4 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TRIM47Q96LD4 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC17.67■□□□□ 0.42
TRIM47Q96LD4 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
TRIM47Q96LD4 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC17.67■□□□□ 0.42
TRIM47Q96LD4 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC17.67■□□□□ 0.42
TRIM47Q96LD4 AC148477.4-201ENST00000613430 1793 ntBASIC17.67■□□□□ 0.42
TRIM47Q96LD4 KANK2-201ENST00000586659 5162 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
TRIM47Q96LD4 NDUFB8-201ENST00000299166 671 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TRIM47Q96LD4 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
TRIM47Q96LD4 SF3B5-201ENST00000367569 693 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
TRIM47Q96LD4 SNX21-203ENST00000372541 771 ntTSL 2 BASIC17.67■□□□□ 0.42
TRIM47Q96LD4 NDUFC1-201ENST00000394223 598 ntAPPRIS P1 TSL 3 BASIC17.67■□□□□ 0.42
TRIM47Q96LD4 FAM3B-203ENST00000398647 864 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
TRIM47Q96LD4 FAM3B-204ENST00000398652 1125 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
TRIM47Q96LD4 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 43.9 ms