Protein–RNA interactions for Protein: Q96BQ3

TRIM43, Tripartite motif-containing protein 43, humanhuman

Predicted RBP Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM43Q96BQ3 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
TRIM43Q96BQ3 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TRIM43Q96BQ3 MEIKIN-205ENST00000616644 1438 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
TRIM43Q96BQ3 PCDH8P1-201ENST00000428983 2773 ntBASIC16.14■□□□□ 0.17
TRIM43Q96BQ3 TNFSF11-201ENST00000239849 911 ntTSL 5 BASIC16.14■□□□□ 0.17
TRIM43Q96BQ3 LY86-202ENST00000379953 1197 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
TRIM43Q96BQ3 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TRIM43Q96BQ3 HCG27-204ENST00000424675 895 ntTSL 3 BASIC16.14■□□□□ 0.17
TRIM43Q96BQ3 SUMF2-210ENST00000437307 947 ntTSL 2 BASIC16.14■□□□□ 0.17
TRIM43Q96BQ3 AL035414.1-201ENST00000451327 857 ntBASIC16.14■□□□□ 0.17
TRIM43Q96BQ3 SNHG17-208ENST00000456953 546 ntTSL 3 BASIC16.14■□□□□ 0.17
TRIM43Q96BQ3 AREG-202ENST00000502307 956 ntTSL 5 BASIC16.14■□□□□ 0.17
TRIM43Q96BQ3 AC233724.6-201ENST00000503184 1088 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
TRIM43Q96BQ3 CD59-210ENST00000528700 652 ntAPPRIS P2 TSL 2 BASIC16.14■□□□□ 0.17
TRIM43Q96BQ3 DBP-202ENST00000593500 712 ntTSL 2 BASIC16.14■□□□□ 0.17
TRIM43Q96BQ3 ALKBH7-202ENST00000596657 603 ntTSL 2 BASIC16.14■□□□□ 0.17
TRIM43Q96BQ3 LINC00923-205ENST00000615399 932 ntTSL 5 BASIC16.14■□□□□ 0.17
TRIM43Q96BQ3 HIST1H3F-201ENST00000618052 411 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
TRIM43Q96BQ3 AC073592.2-201ENST00000623062 780 ntBASIC16.14■□□□□ 0.17
TRIM43Q96BQ3 HTR4-213ENST00000631296 1224 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TRIM43Q96BQ3 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TRIM43Q96BQ3 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TRIM43Q96BQ3 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC16.14■□□□□ 0.17
TRIM43Q96BQ3 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
TRIM43Q96BQ3 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TRIM43Q96BQ3 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TRIM43Q96BQ3 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TRIM43Q96BQ3 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TRIM43Q96BQ3 CD48-203ENST00000613788 1500 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
TRIM43Q96BQ3 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TRIM43Q96BQ3 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TRIM43Q96BQ3 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC16.13■□□□□ 0.17
TRIM43Q96BQ3 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC16.13■□□□□ 0.17
TRIM43Q96BQ3 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
TRIM43Q96BQ3 FOS-201ENST00000303562 2158 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
TRIM43Q96BQ3 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC16.13■□□□□ 0.17
TRIM43Q96BQ3 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC16.13■□□□□ 0.17
TRIM43Q96BQ3 CICP13-201ENST00000422015 2789 ntBASIC16.13■□□□□ 0.17
TRIM43Q96BQ3 ACE-203ENST00000413513 2237 ntTSL 2 BASIC16.13■□□□□ 0.17
TRIM43Q96BQ3 SUPT20HL2-201ENST00000486479 2409 ntBASIC16.13■□□□□ 0.17
TRIM43Q96BQ3 ADAMTS18-201ENST00000282849 5913 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
TRIM43Q96BQ3 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
TRIM43Q96BQ3 SPIN2B-203ENST00000374910 725 ntTSL 3 BASIC16.13■□□□□ 0.17
TRIM43Q96BQ3 AC069185.1-202ENST00000533405 471 ntTSL 3 BASIC16.13■□□□□ 0.17
TRIM43Q96BQ3 AC012158.2-201ENST00000536546 354 ntBASIC16.13■□□□□ 0.17
TRIM43Q96BQ3 AL356756.1-201ENST00000550941 551 ntTSL 3 BASIC16.13■□□□□ 0.17
TRIM43Q96BQ3 MESP2-203ENST00000560219 859 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
TRIM43Q96BQ3 ATP2A1-AS1-201ENST00000561547 558 ntTSL 2 BASIC16.13■□□□□ 0.17
TRIM43Q96BQ3 EIF5AP2-201ENST00000585668 1047 ntBASIC16.13■□□□□ 0.17
TRIM43Q96BQ3 TMIGD2-204ENST00000600349 333 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
TRIM43Q96BQ3 SCP2-217ENST00000640998 1101 ntTSL 5 BASIC16.13■□□□□ 0.17
TRIM43Q96BQ3 AC002472.4-201ENST00000641915 272 ntBASIC16.13■□□□□ 0.17
TRIM43Q96BQ3 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
TRIM43Q96BQ3 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
TRIM43Q96BQ3 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC16.13■□□□□ 0.17
TRIM43Q96BQ3 DDX19A-202ENST00000417604 1703 ntTSL 2 BASIC16.13■□□□□ 0.17
TRIM43Q96BQ3 SCAF11-203ENST00000395453 1336 ntAPPRIS ALT2 TSL 2 BASIC16.13■□□□□ 0.17
TRIM43Q96BQ3 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
TRIM43Q96BQ3 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
TRIM43Q96BQ3 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC16.13■□□□□ 0.17
TRIM43Q96BQ3 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
TRIM43Q96BQ3 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
TRIM43Q96BQ3 ANXA8L1-202ENST00000611655 1398 ntTSL 2 BASIC16.13■□□□□ 0.17
TRIM43Q96BQ3 METTL7B-202ENST00000614691 1368 ntTSL 5 BASIC16.13■□□□□ 0.17
TRIM43Q96BQ3 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
TRIM43Q96BQ3 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
TRIM43Q96BQ3 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC16.12■□□□□ 0.17
TRIM43Q96BQ3 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
TRIM43Q96BQ3 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC16.12■□□□□ 0.17
TRIM43Q96BQ3 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC16.12■□□□□ 0.17
TRIM43Q96BQ3 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
TRIM43Q96BQ3 PTGES3L-AARSD1-202ENST00000409103 1670 ntTSL 5 BASIC16.12■□□□□ 0.17
TRIM43Q96BQ3 TMEM258-207ENST00000543510 1692 ntTSL 2 BASIC16.12■□□□□ 0.17
TRIM43Q96BQ3 AC012508.2-201ENST00000567613 1472 ntBASIC16.12■□□□□ 0.17
TRIM43Q96BQ3 ADAMTS13-206ENST00000371929 4934 ntAPPRIS P4 TSL 1 (best) BASIC16.12■□□□□ 0.17
TRIM43Q96BQ3 IL3RA-201ENST00000331035 1706 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
TRIM43Q96BQ3 FAS-202ENST00000352159 1722 ntTSL 5 BASIC16.12■□□□□ 0.17
TRIM43Q96BQ3 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
TRIM43Q96BQ3 C2orf70-201ENST00000329615 731 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
TRIM43Q96BQ3 C7orf61-201ENST00000332375 1004 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
TRIM43Q96BQ3 PRTFDC1-202ENST00000376376 741 ntTSL 2 BASIC16.12■□□□□ 0.17
TRIM43Q96BQ3 PDCD5-202ENST00000379316 154 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
TRIM43Q96BQ3 TRBJ2-6-201ENST00000390418 53 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
TRIM43Q96BQ3 TLE1P1-201ENST00000422965 589 ntBASIC16.12■□□□□ 0.17
TRIM43Q96BQ3 AC093909.3-201ENST00000504783 336 ntBASIC16.12■□□□□ 0.17
TRIM43Q96BQ3 LINC02062-201ENST00000513175 478 ntTSL 3 BASIC16.12■□□□□ 0.17
TRIM43Q96BQ3 RTN4RL2-203ENST00000533205 637 ntTSL 3 BASIC16.12■□□□□ 0.17
TRIM43Q96BQ3 SLC25A21-203ENST00000555449 1023 ntAPPRIS ALT1 TSL 2 BASIC16.12■□□□□ 0.17
TRIM43Q96BQ3 NPLOC4-209ENST00000572760 946 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
TRIM43Q96BQ3 PDCD5-208ENST00000592786 468 ntTSL 3 BASIC16.12■□□□□ 0.17
TRIM43Q96BQ3 AC242426.4-201ENST00000606856 573 ntTSL 5 BASIC16.12■□□□□ 0.17
TRIM43Q96BQ3 ZNF7-202ENST00000446747 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
TRIM43Q96BQ3 TMBIM7P-202ENST00000641474 1516 ntBASIC16.12■□□□□ 0.17
TRIM43Q96BQ3 RASGEF1B-202ENST00000335927 1756 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
TRIM43Q96BQ3 TOMM22-201ENST00000216034 2040 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
TRIM43Q96BQ3 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC16.12■□□□□ 0.17
TRIM43Q96BQ3 ARFIP1-204ENST00000429148 1599 ntTSL 2 BASIC16.12■□□□□ 0.17
TRIM43Q96BQ3 EDNRB-204ENST00000626030 1571 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
TRIM43Q96BQ3 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC16.12■□□□□ 0.17
TRIM43Q96BQ3 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC16.12■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 36.3 ms