Protein–RNA interactions for Protein: Q8TER0

SNED1, Sushi, nidogen and EGF-like domain-containing protein 1, humanhuman

Predictions only

Length 1,413 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1Q8TER0 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC18.02■□□□□ 0.48
SNED1Q8TER0 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
SNED1Q8TER0 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC18.02■□□□□ 0.48
SNED1Q8TER0 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
SNED1Q8TER0 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
SNED1Q8TER0 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.47
SNED1Q8TER0 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
SNED1Q8TER0 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.47
SNED1Q8TER0 ZNF846-201ENST00000397902 2016 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
SNED1Q8TER0 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
SNED1Q8TER0 DLEU2-201ENST00000235290 1739 ntTSL 5 BASIC18.01■□□□□ 0.47
SNED1Q8TER0 UBXN11-202ENST00000357089 1555 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
SNED1Q8TER0 CHCHD7-202ENST00000355315 1535 ntTSL 2 BASIC18.01■□□□□ 0.47
SNED1Q8TER0 MIR762HG-203ENST00000570025 1429 ntTSL 2 BASIC18.01■□□□□ 0.47
SNED1Q8TER0 RELL1-201ENST00000314117 1326 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
SNED1Q8TER0 NCR3-204ENST00000376073 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
SNED1Q8TER0 Z97652.1-201ENST00000415176 329 ntTSL 5 BASIC18.01■□□□□ 0.47
SNED1Q8TER0 AC254562.2-201ENST00000428786 667 ntTSL 3 BASIC18.01■□□□□ 0.47
SNED1Q8TER0 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC18.01■□□□□ 0.47
SNED1Q8TER0 AL157788.1-201ENST00000437838 229 ntTSL 3 BASIC18.01■□□□□ 0.47
SNED1Q8TER0 SNHG14-209ENST00000456576 544 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
SNED1Q8TER0 AL512330.1-201ENST00000456701 349 ntTSL 3 BASIC18.01■□□□□ 0.47
SNED1Q8TER0 AC010234.1-201ENST00000494599 870 ntBASIC18.01■□□□□ 0.47
SNED1Q8TER0 ZNF331-217ENST00000512387 2130 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
SNED1Q8TER0 AC129102.1-201ENST00000535755 525 ntTSL 4 BASIC18.01■□□□□ 0.47
SNED1Q8TER0 JKAMP-207ENST00000554271 2137 ntTSL 2 BASIC18.01■□□□□ 0.47
SNED1Q8TER0 LINC01224-201ENST00000593573 798 ntTSL 4 BASIC18.01■□□□□ 0.47
SNED1Q8TER0 ATRAID-207ENST00000606999 956 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
SNED1Q8TER0 HIST1H3F-201ENST00000618052 411 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
SNED1Q8TER0 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
SNED1Q8TER0 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
SNED1Q8TER0 THUMPD3-AS1-212ENST00000520447 1809 ntTSL 5 BASIC18.01■□□□□ 0.47
SNED1Q8TER0 FAS-202ENST00000352159 1722 ntTSL 5 BASIC18.01■□□□□ 0.47
SNED1Q8TER0 TMEM258-207ENST00000543510 1692 ntTSL 2 BASIC18.01■□□□□ 0.47
SNED1Q8TER0 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
SNED1Q8TER0 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
SNED1Q8TER0 C5orf38-207ENST00000515640 1441 ntAPPRIS ALT2 TSL 3 BASIC18■□□□□ 0.47
SNED1Q8TER0 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC18■□□□□ 0.47
SNED1Q8TER0 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
SNED1Q8TER0 LINC00665-203ENST00000438368 1863 ntTSL 5 BASIC18■□□□□ 0.47
SNED1Q8TER0 TMEM177-202ENST00000401466 1346 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
SNED1Q8TER0 HDHD3-201ENST00000238379 1834 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
SNED1Q8TER0 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
SNED1Q8TER0 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
SNED1Q8TER0 AC211486.1-201ENST00000275590 980 ntTSL 1 (best) BASIC18■□□□□ 0.47
SNED1Q8TER0 CD300A-204ENST00000392625 1163 ntTSL 1 (best) BASIC18■□□□□ 0.47
SNED1Q8TER0 HIST2H2BA-201ENST00000412169 381 ntBASIC18■□□□□ 0.47
SNED1Q8TER0 LINC01868-201ENST00000414965 562 ntTSL 4 BASIC18■□□□□ 0.47
SNED1Q8TER0 LINC00431-201ENST00000440735 1189 ntTSL 5 BASIC18■□□□□ 0.47
SNED1Q8TER0 FKBP11-202ENST00000444214 630 ntTSL 2 BASIC18■□□□□ 0.47
SNED1Q8TER0 ZAP70-202ENST00000451498 1085 ntTSL 1 (best) BASIC18■□□□□ 0.47
SNED1Q8TER0 TP53AIP1-201ENST00000458238 777 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
SNED1Q8TER0 MYL7-209ENST00000458240 791 ntTSL 1 (best) BASIC18■□□□□ 0.47
SNED1Q8TER0 SNCB-203ENST00000506696 552 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
SNED1Q8TER0 AC105254.1-201ENST00000507782 621 ntTSL 4 BASIC18■□□□□ 0.47
SNED1Q8TER0 TMEM223-202ENST00000525631 736 ntTSL 1 (best) BASIC18■□□□□ 0.47
SNED1Q8TER0 CYB561D1-207ENST00000527072 892 ntTSL 1 (best) BASIC18■□□□□ 0.47
SNED1Q8TER0 AP000911.2-201ENST00000534330 502 ntBASIC18■□□□□ 0.47
SNED1Q8TER0 AC040162.4-201ENST00000574912 1185 ntAPPRIS P1 TSL 3 BASIC18■□□□□ 0.47
SNED1Q8TER0 AC107464.3-201ENST00000609172 737 ntBASIC18■□□□□ 0.47
SNED1Q8TER0 LINC01746-201ENST00000621390 449 ntTSL 3 BASIC18■□□□□ 0.47
SNED1Q8TER0 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC18■□□□□ 0.47
SNED1Q8TER0 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC18■□□□□ 0.47
SNED1Q8TER0 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
SNED1Q8TER0 LINC00665-206ENST00000590622 1749 ntTSL 1 (best) BASIC18■□□□□ 0.47
SNED1Q8TER0 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
SNED1Q8TER0 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
SNED1Q8TER0 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
SNED1Q8TER0 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
SNED1Q8TER0 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC18■□□□□ 0.47
SNED1Q8TER0 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC18■□□□□ 0.47
SNED1Q8TER0 MEIKIN-205ENST00000616644 1438 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
SNED1Q8TER0 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC18■□□□□ 0.47
SNED1Q8TER0 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC18■□□□□ 0.47
SNED1Q8TER0 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
SNED1Q8TER0 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC17.99■□□□□ 0.47
SNED1Q8TER0 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC17.99■□□□□ 0.47
SNED1Q8TER0 RAMP3-201ENST00000242249 1323 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
SNED1Q8TER0 SERHL-201ENST00000359906 1346 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
SNED1Q8TER0 KRT18P9-201ENST00000604826 1300 ntBASIC17.99■□□□□ 0.47
SNED1Q8TER0 REXO1L2P-201ENST00000425429 2069 ntBASIC17.99■□□□□ 0.47
SNED1Q8TER0 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC17.99■□□□□ 0.47
SNED1Q8TER0 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC17.99■□□□□ 0.47
SNED1Q8TER0 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC17.99■□□□□ 0.47
SNED1Q8TER0 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
SNED1Q8TER0 PIGL-201ENST00000225609 1137 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
SNED1Q8TER0 C11orf52-201ENST00000278601 1141 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
SNED1Q8TER0 MAGOH-202ENST00000371470 756 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
SNED1Q8TER0 RPS9-204ENST00000391753 709 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
SNED1Q8TER0 TRPM2-AS-201ENST00000423310 586 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
SNED1Q8TER0 AL035414.1-201ENST00000451327 857 ntBASIC17.99■□□□□ 0.47
SNED1Q8TER0 PGAP2-212ENST00000464906 1259 ntTSL 2 BASIC17.99■□□□□ 0.47
SNED1Q8TER0 AC114947.1-202ENST00000514136 344 ntBASIC17.99■□□□□ 0.47
SNED1Q8TER0 AC012379.2-201ENST00000560237 765 ntTSL 2 BASIC17.99■□□□□ 0.47
SNED1Q8TER0 SLC27A5-204ENST00000594786 643 ntTSL 2 BASIC17.99■□□□□ 0.47
SNED1Q8TER0 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
SNED1Q8TER0 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
SNED1Q8TER0 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC17.99■□□□□ 0.47
SNED1Q8TER0 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
SNED1Q8TER0 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms