Protein–RNA interactions for Protein: Q86VV8

RTTN, Rotatin, humanhuman

Predictions only

Length 2,226 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTTNQ86VV8 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
RTTNQ86VV8 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
RTTNQ86VV8 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
RTTNQ86VV8 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
RTTNQ86VV8 SLC36A1-207ENST00000520701 2005 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
RTTNQ86VV8 ZKSCAN7-201ENST00000273320 3477 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
RTTNQ86VV8 AC005264.1-201ENST00000587587 2319 ntTSL 2 BASIC13.45□□□□□ -0.26
RTTNQ86VV8 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
RTTNQ86VV8 TSFM-201ENST00000323833 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
RTTNQ86VV8 ANKRD19P-201ENST00000338192 862 ntBASIC13.45□□□□□ -0.26
RTTNQ86VV8 ITIH1-202ENST00000405128 1122 ntTSL 2 BASIC13.45□□□□□ -0.26
RTTNQ86VV8 MIR1908-201ENST00000410394 80 ntBASIC13.45□□□□□ -0.26
RTTNQ86VV8 AL133456.1-201ENST00000415655 577 ntTSL 4 BASIC13.45□□□□□ -0.26
RTTNQ86VV8 AC073133.1-201ENST00000426187 432 ntTSL 3 BASIC13.45□□□□□ -0.26
RTTNQ86VV8 AL355994.3-201ENST00000437156 466 ntTSL 2 BASIC13.45□□□□□ -0.26
RTTNQ86VV8 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC13.45□□□□□ -0.26
RTTNQ86VV8 AL355994.2-201ENST00000447882 704 ntBASIC13.45□□□□□ -0.26
RTTNQ86VV8 ZNF527-203ENST00000483919 1142 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
RTTNQ86VV8 GNAL-204ENST00000535121 1285 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
RTTNQ86VV8 AC012322.1-201ENST00000561657 861 ntTSL 3 BASIC13.45□□□□□ -0.26
RTTNQ86VV8 AC036164.1-201ENST00000570544 333 ntBASIC13.45□□□□□ -0.26
RTTNQ86VV8 PAM16-204ENST00000571941 674 ntTSL 3 BASIC13.45□□□□□ -0.26
RTTNQ86VV8 BRI3BPP1-201ENST00000594224 787 ntBASIC13.45□□□□□ -0.26
RTTNQ86VV8 HIST1H3I-201ENST00000616365 411 ntAPPRIS P1 BASIC13.45□□□□□ -0.26
RTTNQ86VV8 FGR-203ENST00000374005 2729 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
RTTNQ86VV8 CHPF2-204ENST00000495645 2709 ntTSL 2 BASIC13.45□□□□□ -0.26
RTTNQ86VV8 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC13.45□□□□□ -0.26
RTTNQ86VV8 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC13.45□□□□□ -0.26
RTTNQ86VV8 SHC1-204ENST00000368450 3059 ntAPPRIS ALT1 TSL 1 (best) BASIC13.45□□□□□ -0.26
RTTNQ86VV8 SHC1-205ENST00000368453 3062 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
RTTNQ86VV8 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC13.45□□□□□ -0.26
RTTNQ86VV8 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC13.45□□□□□ -0.26
RTTNQ86VV8 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC13.45□□□□□ -0.26
RTTNQ86VV8 EDC3-201ENST00000315127 3763 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
RTTNQ86VV8 REXO1L4P-201ENST00000605109 1937 ntBASIC13.45□□□□□ -0.26
RTTNQ86VV8 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
RTTNQ86VV8 BCKDHA-201ENST00000269980 2103 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
RTTNQ86VV8 AKAP1-201ENST00000314126 2380 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
RTTNQ86VV8 CCDC183-AS1-201ENST00000414656 2386 ntTSL 2 BASIC13.45□□□□□ -0.26
RTTNQ86VV8 PCDHA7-201ENST00000356878 2922 ntAPPRIS ALT2 BASIC13.45□□□□□ -0.26
RTTNQ86VV8 BTN1A1-201ENST00000244513 2895 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
RTTNQ86VV8 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
RTTNQ86VV8 RCOR2-201ENST00000301459 2604 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
RTTNQ86VV8 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
RTTNQ86VV8 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
RTTNQ86VV8 SLC25A19-202ENST00000375261 1486 ntTSL 5 BASIC13.44□□□□□ -0.26
RTTNQ86VV8 ALDH1B1-201ENST00000377698 3066 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
RTTNQ86VV8 RPL5P21-201ENST00000404620 815 ntBASIC13.44□□□□□ -0.26
RTTNQ86VV8 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
RTTNQ86VV8 TMEM14DP-201ENST00000422205 345 ntBASIC13.44□□□□□ -0.26
RTTNQ86VV8 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC13.44□□□□□ -0.26
RTTNQ86VV8 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC13.44□□□□□ -0.26
RTTNQ86VV8 TRIM50-202ENST00000453152 1599 ntAPPRIS P1 TSL 2 BASIC13.44□□□□□ -0.26
RTTNQ86VV8 Z84485.1-202ENST00000499560 1230 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
RTTNQ86VV8 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
RTTNQ86VV8 KRT8-205ENST00000546897 1755 ntAPPRIS P1 TSL 2 BASIC13.44□□□□□ -0.26
RTTNQ86VV8 AAAS-217ENST00000550286 1652 ntTSL 5 BASIC13.44□□□□□ -0.26
RTTNQ86VV8 C15orf52-206ENST00000559313 3022 ntAPPRIS P2 TSL 5 BASIC13.44□□□□□ -0.26
RTTNQ86VV8 GABARAPL2-202ENST00000563744 791 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
RTTNQ86VV8 HAUS2-207ENST00000568846 709 ntTSL 3 BASIC13.44□□□□□ -0.26
RTTNQ86VV8 AC126365.1-201ENST00000578585 1514 ntBASIC13.44□□□□□ -0.26
RTTNQ86VV8 AC129510.1-201ENST00000579979 555 ntTSL 3 BASIC13.44□□□□□ -0.26
RTTNQ86VV8 MBD1-211ENST00000585595 2179 ntAPPRIS ALT2 TSL 2 BASIC13.44□□□□□ -0.26
RTTNQ86VV8 FLT3LG-205ENST00000596435 1034 ntTSL 5 BASIC13.44□□□□□ -0.26
RTTNQ86VV8 SLC9A3-AS1-206ENST00000607005 435 ntTSL 3 BASIC13.44□□□□□ -0.26
RTTNQ86VV8 AC133552.6-201ENST00000613406 534 ntBASIC13.44□□□□□ -0.26
RTTNQ86VV8 SHROOM1-208ENST00000617339 3638 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
RTTNQ86VV8 NOS1AP-205ENST00000493151 5559 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
RTTNQ86VV8 CDK17-201ENST00000261211 4157 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
RTTNQ86VV8 HSP90AA1-201ENST00000216281 3379 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
RTTNQ86VV8 ARHGAP4-203ENST00000370028 3372 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
RTTNQ86VV8 SLC52A3-202ENST00000381944 3060 ntTSL 2 BASIC13.44□□□□□ -0.26
RTTNQ86VV8 PSMD9-207ENST00000541212 2784 ntAPPRIS P2 TSL 1 (best) BASIC13.44□□□□□ -0.26
RTTNQ86VV8 CTBP1-AS2-205ENST00000578730 2757 ntTSL 2 BASIC13.44□□□□□ -0.26
RTTNQ86VV8 LINC00552-201ENST00000625151 2579 ntBASIC13.44□□□□□ -0.26
RTTNQ86VV8 AL928654.2-201ENST00000551271 2279 ntTSL 3 BASIC13.44□□□□□ -0.26
RTTNQ86VV8 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
RTTNQ86VV8 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
RTTNQ86VV8 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
RTTNQ86VV8 ADPRHL1-204ENST00000612156 9759 ntTSL 5 BASIC13.44□□□□□ -0.26
RTTNQ86VV8 AJAP1-202ENST00000378191 11666 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
RTTNQ86VV8 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
RTTNQ86VV8 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
RTTNQ86VV8 MEX3B-201ENST00000329713 3528 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
RTTNQ86VV8 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC13.44□□□□□ -0.26
RTTNQ86VV8 ATP5F1-202ENST00000369722 3156 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
RTTNQ86VV8 P2RY4-201ENST00000374519 1595 ntAPPRIS P1 BASIC13.44□□□□□ -0.26
RTTNQ86VV8 ANKRD11-201ENST00000301030 9301 ntAPPRIS P2 TSL 5 BASIC13.44□□□□□ -0.26
RTTNQ86VV8 EID3-201ENST00000527879 1467 ntAPPRIS P1 BASIC13.44□□□□□ -0.26
RTTNQ86VV8 BCS1L-205ENST00000412366 1430 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
RTTNQ86VV8 VAT1-201ENST00000355653 2734 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
RTTNQ86VV8 TDRD5-204ENST00000444136 3946 ntAPPRIS ALT1 TSL 1 (best) BASIC13.44□□□□□ -0.26
RTTNQ86VV8 PRM2-201ENST00000241808 680 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
RTTNQ86VV8 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
RTTNQ86VV8 KIAA0907-201ENST00000368319 1155 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
RTTNQ86VV8 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
RTTNQ86VV8 MIR663B-201ENST00000408361 115 ntBASIC13.44□□□□□ -0.26
RTTNQ86VV8 Z82214.2-201ENST00000420269 531 ntTSL 4 BASIC13.44□□□□□ -0.26
RTTNQ86VV8 PRM2-202ENST00000435245 723 ntAPPRIS ALT2 TSL 2 BASIC13.44□□□□□ -0.26
RTTNQ86VV8 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC13.44□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 37.6 ms