Protein–RNA interactions for Protein: P61966

AP1S1, AP-1 complex subunit sigma-1A, humanhuman

Predictions only

Length 158 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S1P61966 IFT20-203ENST00000395418 825 ntAPPRIS P4 TSL 1 (best) BASIC15.2■□□□□ 0.02
AP1S1P61966 GATD1-203ENST00000397472 790 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
AP1S1P61966 SUMF2-205ENST00000413756 1171 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
AP1S1P61966 KRT223P-202ENST00000449164 1292 ntBASIC15.2■□□□□ 0.02
AP1S1P61966 DERL3-208ENST00000476077 969 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
AP1S1P61966 C1RL-212ENST00000545337 813 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
AP1S1P61966 AL132711.1-201ENST00000557546 722 ntTSL 3 BASIC15.2■□□□□ 0.02
AP1S1P61966 GCHFR-204ENST00000559445 626 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
AP1S1P61966 DHRS7C-202ENST00000571134 984 ntAPPRIS ALT1 TSL 1 (best) BASIC15.2■□□□□ 0.02
AP1S1P61966 IFT20-216ENST00000588477 774 ntTSL 5 BASIC15.2■□□□□ 0.02
AP1S1P61966 LINC01002-220ENST00000632790 449 ntTSL 5 BASIC15.2■□□□□ 0.02
AP1S1P61966 COX11-210ENST00000639671 696 ntBASIC15.2■□□□□ 0.02
AP1S1P61966 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
AP1S1P61966 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
AP1S1P61966 AL354989.2-201ENST00000435838 1540 ntBASIC15.2■□□□□ 0.02
AP1S1P61966 ENDOU-203ENST00000545824 1513 ntTSL 2 BASIC15.2■□□□□ 0.02
AP1S1P61966 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
AP1S1P61966 ANKRD30BP2-201ENST00000435744 1610 ntBASIC15.2■□□□□ 0.02
AP1S1P61966 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC15.2■□□□□ 0.02
AP1S1P61966 AJ011931.1-201ENST00000618749 2492 ntBASIC15.2■□□□□ 0.02
AP1S1P61966 LINC01185-202ENST00000452343 1705 ntTSL 2 BASIC15.2■□□□□ 0.02
AP1S1P61966 EML4-201ENST00000318522 5549 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
AP1S1P61966 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
AP1S1P61966 AHCYP2-201ENST00000430630 1300 ntBASIC15.19■□□□□ 0.02
AP1S1P61966 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC15.19■□□□□ 0.02
AP1S1P61966 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC15.19■□□□□ 0.02
AP1S1P61966 CRISPLD2-203ENST00000564567 1651 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
AP1S1P61966 TUBA8-202ENST00000330423 2018 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
AP1S1P61966 SLC1A5-201ENST00000412532 1750 ntTSL 2 BASIC15.19■□□□□ 0.02
AP1S1P61966 TCP10-202ENST00000397829 2141 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
AP1S1P61966 RALGAPA1-203ENST00000389698 7864 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
AP1S1P61966 ADCY2-201ENST00000338316 6575 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
AP1S1P61966 UBE3B-212ENST00000540230 1541 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
AP1S1P61966 C18orf25-203ENST00000615052 5462 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
AP1S1P61966 LINC00554-201ENST00000564841 3011 ntBASIC15.19■□□□□ 0.02
AP1S1P61966 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
AP1S1P61966 INHBA-203ENST00000442711 1632 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
AP1S1P61966 USP47-207ENST00000527733 4525 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
AP1S1P61966 CKLF-203ENST00000351137 508 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
AP1S1P61966 CDK2-202ENST00000354056 1260 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
AP1S1P61966 GBGT1-202ENST00000372038 847 ntTSL 3 BASIC15.19■□□□□ 0.02
AP1S1P61966 STX1A-203ENST00000395155 783 ntTSL 2 BASIC15.19■□□□□ 0.02
AP1S1P61966 C15orf48-202ENST00000396650 732 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
AP1S1P61966 AC017104.1-201ENST00000415129 720 ntTSL 3 BASIC15.19■□□□□ 0.02
AP1S1P61966 LARGE-AS1-202ENST00000424291 1065 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
AP1S1P61966 AC007969.1-201ENST00000433675 447 ntBASIC15.19■□□□□ 0.02
AP1S1P61966 FAM8A4P-201ENST00000435433 1213 ntBASIC15.19■□□□□ 0.02
AP1S1P61966 AC119751.2-201ENST00000504529 210 ntBASIC15.19■□□□□ 0.02
AP1S1P61966 ATG10-207ENST00000513443 978 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
AP1S1P61966 AP002992.1-201ENST00000527519 491 ntTSL 3 BASIC15.19■□□□□ 0.02
AP1S1P61966 ZNF720-210ENST00000534369 791 ntTSL 3 BASIC15.19■□□□□ 0.02
AP1S1P61966 AC125603.3-201ENST00000550742 486 ntTSL 3 BASIC15.19■□□□□ 0.02
AP1S1P61966 AC023310.1-201ENST00000554836 735 ntBASIC15.19■□□□□ 0.02
AP1S1P61966 CX3CL1-203ENST00000564948 563 ntTSL 3 BASIC15.19■□□□□ 0.02
AP1S1P61966 MIR22HG-212ENST00000577164 931 ntTSL 4 BASIC15.19■□□□□ 0.02
AP1S1P61966 LINC01887-202ENST00000584734 860 ntTSL 3 BASIC15.19■□□□□ 0.02
AP1S1P61966 AC008687.7-202ENST00000637404 953 ntBASIC15.19■□□□□ 0.02
AP1S1P61966 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC15.19■□□□□ 0.02
AP1S1P61966 ALOX12B-201ENST00000319144 2502 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
AP1S1P61966 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
AP1S1P61966 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
AP1S1P61966 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
AP1S1P61966 CACNA1I-203ENST00000404898 9892 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
AP1S1P61966 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
AP1S1P61966 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
AP1S1P61966 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
AP1S1P61966 SIDT1-202ENST00000393830 2572 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
AP1S1P61966 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
AP1S1P61966 SF1-209ENST00000433274 2317 ntTSL 2 BASIC15.18■□□□□ 0.02
AP1S1P61966 AC005885.1-204ENST00000637885 2885 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
AP1S1P61966 TLX1NB-202ENST00000445873 1862 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
AP1S1P61966 ANXA8L1-208ENST00000622769 1861 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
AP1S1P61966 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC15.18■□□□□ 0.02
AP1S1P61966 DUSP22-202ENST00000419235 3098 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
AP1S1P61966 ISCA2-204ENST00000556816 2626 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
AP1S1P61966 TAP2-201ENST00000374897 5684 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
AP1S1P61966 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC15.18■□□□□ 0.02
AP1S1P61966 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
AP1S1P61966 HNRNPR-212ENST00000606561 1837 ntTSL 2 BASIC15.18■□□□□ 0.02
AP1S1P61966 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
AP1S1P61966 MAEL-202ENST00000367872 1908 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
AP1S1P61966 ZCCHC4-201ENST00000302874 2785 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
AP1S1P61966 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
AP1S1P61966 ANGPTL8-201ENST00000252453 872 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
AP1S1P61966 PLAC9-201ENST00000372263 785 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
AP1S1P61966 U82695.1-202ENST00000428676 700 ntTSL 2 BASIC15.18■□□□□ 0.02
AP1S1P61966 MDM2-215ENST00000428863 1037 ntTSL 5 BASIC15.18■□□□□ 0.02
AP1S1P61966 AC128709.2-201ENST00000438408 558 ntTSL 4 BASIC15.18■□□□□ 0.02
AP1S1P61966 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
AP1S1P61966 LLPH-AS1-201ENST00000510317 623 ntTSL 4 BASIC15.18■□□□□ 0.02
AP1S1P61966 AP001453.3-201ENST00000545800 853 ntTSL 3 BASIC15.18■□□□□ 0.02
AP1S1P61966 AC012645.3-203ENST00000567153 520 ntTSL 2 BASIC15.18■□□□□ 0.02
AP1S1P61966 DMAC2-208ENST00000589970 979 ntTSL 2 BASIC15.18■□□□□ 0.02
AP1S1P61966 ANGPTL8-203ENST00000591200 504 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
AP1S1P61966 AC025048.1-201ENST00000592317 542 ntTSL 4 BASIC15.18■□□□□ 0.02
AP1S1P61966 DMAC2-215ENST00000597457 492 ntTSL 5 BASIC15.18■□□□□ 0.02
AP1S1P61966 AC138696.2-201ENST00000607376 223 ntBASIC15.18■□□□□ 0.02
AP1S1P61966 HTT-AS1_1.1-201ENST00000612914 230 ntBASIC15.18■□□□□ 0.02
AP1S1P61966 ANGPTL8-204ENST00000616433 1223 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
AP1S1P61966 NUDT16-203ENST00000537561 5943 ntTSL 5 BASIC15.18■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 35.2 ms