Protein–RNA interactions for Protein: P55072

VCP, Transitional endoplasmic reticulum ATPase, humanhuman

Known RBP Predictions only

Length 806 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCPP55072 ZNF334-202ENST00000457685 3487 ntTSL 2 BASIC16.25■□□□□ 0.19
VCPP55072 KRT85-201ENST00000257901 2447 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
VCPP55072 AC018716.2-201ENST00000528390 2597 ntTSL 2 BASIC16.25■□□□□ 0.19
VCPP55072 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
VCPP55072 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
VCPP55072 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
VCPP55072 HS6ST3-201ENST00000376705 7804 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
VCPP55072 SLC22A7-203ENST00000372589 2549 ntAPPRIS ALT2 TSL 2 BASIC16.24■□□□□ 0.19
VCPP55072 PPP2R5D-208ENST00000485511 3044 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
VCPP55072 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC16.24■□□□□ 0.19
VCPP55072 CHST10-203ENST00000409701 1338 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
VCPP55072 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
VCPP55072 STRA6-218ENST00000574278 2455 ntTSL 2 BASIC16.24■□□□□ 0.19
VCPP55072 NACAD-202ENST00000490531 4780 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
VCPP55072 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
VCPP55072 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
VCPP55072 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC16.24■□□□□ 0.19
VCPP55072 PPP3CB-201ENST00000342558 2418 ntTSL 5 BASIC16.24■□□□□ 0.19
VCPP55072 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC16.24■□□□□ 0.19
VCPP55072 DRC3-202ENST00000399182 1923 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
VCPP55072 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
VCPP55072 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC16.24■□□□□ 0.19
VCPP55072 STAT5B-201ENST00000293328 5103 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
VCPP55072 ZMIZ2-202ENST00000309315 5144 ntAPPRIS P4 TSL 2 BASIC16.24■□□□□ 0.19
VCPP55072 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC16.24■□□□□ 0.19
VCPP55072 HEBP1-201ENST00000014930 1173 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
VCPP55072 NEU2-201ENST00000233840 1143 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
VCPP55072 LSM10-201ENST00000315732 850 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
VCPP55072 SPAG11A-203ENST00000351436 534 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
VCPP55072 SPAG11B-204ENST00000361111 534 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
VCPP55072 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
VCPP55072 AL160290.2-201ENST00000448347 831 ntTSL 3 BASIC16.24■□□□□ 0.19
VCPP55072 SNHG11-212ENST00000449351 954 ntTSL 5 BASIC16.24■□□□□ 0.19
VCPP55072 Z93015.1-201ENST00000451718 390 ntBASIC16.24■□□□□ 0.19
VCPP55072 REEP1-202ENST00000453231 940 ntTSL 2 BASIC16.24■□□□□ 0.19
VCPP55072 TMEM198B-204ENST00000484016 896 ntBASIC16.24■□□□□ 0.19
VCPP55072 AC104241.2-201ENST00000532748 789 ntTSL 3 BASIC16.24■□□□□ 0.19
VCPP55072 SPAG5-AS1-203ENST00000554154 491 ntTSL 2 BASIC16.24■□□□□ 0.19
VCPP55072 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
VCPP55072 STXBP2-221ENST00000602355 716 ntTSL 2 BASIC16.24■□□□□ 0.19
VCPP55072 AC005695.3-201ENST00000614522 232 ntBASIC16.24■□□□□ 0.19
VCPP55072 GRAMD2B-201ENST00000285689 3175 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
VCPP55072 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
VCPP55072 PPP1R21-201ENST00000281394 3137 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
VCPP55072 INTS14-204ENST00000442903 1863 ntTSL 2 BASIC16.24■□□□□ 0.19
VCPP55072 LENG8-208ENST00000610347 5789 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
VCPP55072 MFSD14B-201ENST00000375344 3420 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
VCPP55072 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
VCPP55072 TTC6-206ENST00000553443 5833 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
VCPP55072 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
VCPP55072 IPPK-201ENST00000287996 4401 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
VCPP55072 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
VCPP55072 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
VCPP55072 MARS-233ENST00000628866 2583 ntTSL 5 BASIC16.24■□□□□ 0.19
VCPP55072 COMP-203ENST00000542601 2707 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
VCPP55072 LRCH1-202ENST00000389797 3314 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
VCPP55072 ACBD5-202ENST00000375897 4173 ntAPPRIS ALT2 TSL 2 BASIC16.23■□□□□ 0.19
VCPP55072 EPS8L2-223ENST00000533256 3266 ntAPPRIS P2 TSL 5 BASIC16.23■□□□□ 0.19
VCPP55072 WNT16-201ENST00000222462 3147 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
VCPP55072 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
VCPP55072 AFAP1-201ENST00000358461 7516 ntAPPRIS P3 TSL 2 BASIC16.23■□□□□ 0.19
VCPP55072 AC092978.1-201ENST00000474979 1309 ntTSL 5 BASIC16.23■□□□□ 0.19
VCPP55072 AC134312.5-201ENST00000568031 1313 ntBASIC16.23■□□□□ 0.19
VCPP55072 AC092978.1-202ENST00000637590 1327 ntBASIC16.23■□□□□ 0.19
VCPP55072 KIF3A-202ENST00000378746 6325 ntAPPRIS P3 TSL 5 BASIC16.23■□□□□ 0.19
VCPP55072 SLC35A3-221ENST00000640600 3341 ntTSL 5 BASIC16.23■□□□□ 0.19
VCPP55072 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC16.23■□□□□ 0.19
VCPP55072 LINC01101-201ENST00000622953 1884 ntBASIC16.23■□□□□ 0.19
VCPP55072 HTR7-201ENST00000277874 3028 ntAPPRIS P4 TSL 1 (best) BASIC16.23■□□□□ 0.19
VCPP55072 ZNF180-202ENST00000391956 3049 ntAPPRIS ALT2 TSL 2 BASIC16.23■□□□□ 0.19
VCPP55072 TJAP1-207ENST00000436109 2572 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
VCPP55072 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
VCPP55072 HARS-202ENST00000415192 1401 ntTSL 2 BASIC16.23■□□□□ 0.19
VCPP55072 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
VCPP55072 RHOBTB2-206ENST00000522948 4959 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
VCPP55072 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
VCPP55072 SLC25A38-201ENST00000273158 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
VCPP55072 IGF1-201ENST00000307046 1097 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
VCPP55072 IGF1-203ENST00000392904 761 ntTSL 5 BASIC16.23■□□□□ 0.19
VCPP55072 RAB1A-201ENST00000398529 1198 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
VCPP55072 ITIH1-202ENST00000405128 1122 ntTSL 2 BASIC16.23■□□□□ 0.19
VCPP55072 ZNF7-206ENST00000528130 1134 ntTSL 5 BASIC16.23■□□□□ 0.19
VCPP55072 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
VCPP55072 CHMP4BP1-201ENST00000556017 588 ntBASIC16.23■□□□□ 0.19
VCPP55072 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC16.23■□□□□ 0.19
VCPP55072 CLUHP6-201ENST00000580789 941 ntBASIC16.23■□□□□ 0.19
VCPP55072 AC090386.1-202ENST00000586610 469 ntTSL 3 BASIC16.23■□□□□ 0.19
VCPP55072 TUBB6-213ENST00000591909 1017 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
VCPP55072 AC005785.1-202ENST00000597164 237 ntTSL 3 BASIC16.23■□□□□ 0.19
VCPP55072 KLK3-211ENST00000597483 810 ntTSL 2 BASIC16.23■□□□□ 0.19
VCPP55072 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC16.23■□□□□ 0.19
VCPP55072 TUBB3-215ENST00000625617 570 ntTSL 4 BASIC16.23■□□□□ 0.19
VCPP55072 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
VCPP55072 AC067930.6-201ENST00000623257 4947 ntBASIC16.23■□□□□ 0.19
VCPP55072 HNRNPU-204ENST00000440865 3207 ntTSL 2 BASIC16.23■□□□□ 0.19
VCPP55072 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC16.23■□□□□ 0.19
VCPP55072 RGPD5-202ENST00000272454 2907 ntTSL 2 BASIC16.23■□□□□ 0.19
VCPP55072 MEGF10-202ENST00000418761 2238 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
VCPP55072 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
VCPP55072 DNAJC21-202ENST00000382021 6208 ntTSL 2 BASIC16.23■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms