Protein–RNA interactions for Protein: P51784

USP11, Ubiquitin carboxyl-terminal hydrolase 11, humanhuman

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP11P51784 AC004922.1-201ENST00000638617 2430 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
USP11P51784 PDGFRL-201ENST00000251630 1901 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
USP11P51784 CNTFR-204ENST00000610543 1926 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
USP11P51784 CPEB1-211ENST00000615198 2112 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
USP11P51784 LINC01101-201ENST00000622953 1884 ntBASIC17.03■□□□□ 0.32
USP11P51784 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
USP11P51784 HARS2-202ENST00000448069 1426 ntTSL 2 BASIC17.03■□□□□ 0.32
USP11P51784 FAM153A-220ENST00000513554 1437 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
USP11P51784 PPP2R5C-204ENST00000422945 4481 ntTSL 2 BASIC17.03■□□□□ 0.32
USP11P51784 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC17.03■□□□□ 0.32
USP11P51784 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
USP11P51784 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
USP11P51784 CDK16-202ENST00000357227 3144 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
USP11P51784 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
USP11P51784 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
USP11P51784 AZGP1-202ENST00000411734 2027 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
USP11P51784 ELMOD1-201ENST00000265840 2852 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
USP11P51784 ANKMY1-207ENST00000403283 2874 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
USP11P51784 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
USP11P51784 FBXO5-202ENST00000367241 2221 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
USP11P51784 CIAPIN1-213ENST00000569370 1559 ntTSL 3 BASIC17.02■□□□□ 0.32
USP11P51784 HORMAD1-201ENST00000322343 1771 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
USP11P51784 SALL4P5-201ENST00000419001 1760 ntBASIC17.02■□□□□ 0.32
USP11P51784 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
USP11P51784 AC099850.1-201ENST00000451775 1338 ntTSL 2 BASIC17.02■□□□□ 0.32
USP11P51784 PGA5-201ENST00000312403 1519 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
USP11P51784 PLTP-201ENST00000354050 1731 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
USP11P51784 LINC02212-201ENST00000515243 2130 ntTSL 2 BASIC17.02■□□□□ 0.32
USP11P51784 FGFR1OP2-201ENST00000229395 2924 ntTSL 2 BASIC17.02■□□□□ 0.32
USP11P51784 DHX36-201ENST00000308361 3487 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
USP11P51784 KCNQ2-204ENST00000359125 3253 ntAPPRIS P4 TSL 1 (best) BASIC17.02■□□□□ 0.32
USP11P51784 STRA6-218ENST00000574278 2455 ntTSL 2 BASIC17.02■□□□□ 0.32
USP11P51784 AC018442.1-201ENST00000421439 2061 ntBASIC17.02■□□□□ 0.32
USP11P51784 INE2-201ENST00000630399 1874 ntBASIC17.02■□□□□ 0.32
USP11P51784 BATF-201ENST00000286639 980 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
USP11P51784 FAM27C-201ENST00000377542 616 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
USP11P51784 PHACTR1-202ENST00000379329 707 ntTSL 2 BASIC17.02■□□□□ 0.32
USP11P51784 IGHV3-7-201ENST00000390598 430 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
USP11P51784 PEX13-202ENST00000401576 1108 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
USP11P51784 AL450469.1-201ENST00000418953 461 ntTSL 2 BASIC17.02■□□□□ 0.32
USP11P51784 ELFN1-AS1-202ENST00000453348 637 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
USP11P51784 POLR2F-208ENST00000470701 584 ntTSL 3 BASIC17.02■□□□□ 0.32
USP11P51784 STAG3L5P-205ENST00000473757 1255 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
USP11P51784 AC109479.1-201ENST00000519603 624 ntTSL 2 BASIC17.02■□□□□ 0.32
USP11P51784 TNNT1-212ENST00000588981 1163 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
USP11P51784 YIF1B-215ENST00000592246 936 ntTSL 3 BASIC17.02■□□□□ 0.32
USP11P51784 Six3os1_5.1-201ENST00000611000 271 ntBASIC17.02■□□□□ 0.32
USP11P51784 NOP2-222ENST00000617555 2017 ntTSL 5 BASIC17.02■□□□□ 0.32
USP11P51784 SRPX-206ENST00000544439 1842 ntAPPRIS ALT2 TSL 2 BASIC17.02■□□□□ 0.31
USP11P51784 AC004223.3-201ENST00000593039 1638 ntAPPRIS P5 TSL 2 BASIC17.02■□□□□ 0.31
USP11P51784 EHHADH-203ENST00000456310 2577 ntTSL 2 BASIC17.02■□□□□ 0.31
USP11P51784 SLC18A1-203ENST00000381608 1419 ntTSL 5 BASIC17.02■□□□□ 0.31
USP11P51784 AC068946.1-202ENST00000318673 2745 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.31
USP11P51784 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
USP11P51784 IFT52-201ENST00000373030 1757 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
USP11P51784 ITGB7-201ENST00000267082 2867 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
USP11P51784 RTKN-202ENST00000272430 2142 ntAPPRIS ALT1 TSL 1 (best) BASIC17.02■□□□□ 0.31
USP11P51784 DDX55-201ENST00000238146 2654 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
USP11P51784 CRCP-201ENST00000338592 1393 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
USP11P51784 GPD2-208ENST00000438166 2457 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
USP11P51784 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC17.02■□□□□ 0.31
USP11P51784 FAM180B-201ENST00000538490 1388 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
USP11P51784 ENDOV-204ENST00000518137 2815 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.31
USP11P51784 AC013726.1-201ENST00000563747 2285 ntBASIC17.01■□□□□ 0.31
USP11P51784 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC17.01■□□□□ 0.31
USP11P51784 AL162231.1-201ENST00000421828 1525 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
USP11P51784 AC011840.2-201ENST00000563063 1520 ntBASIC17.01■□□□□ 0.31
USP11P51784 TERF1-201ENST00000276602 3268 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
USP11P51784 NOS2P2-202ENST00000639528 1659 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
USP11P51784 TBPL2-201ENST00000247219 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
USP11P51784 LAT2-202ENST00000344995 2363 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
USP11P51784 SLC35A3-209ENST00000638338 2890 ntTSL 5 BASIC17.01■□□□□ 0.31
USP11P51784 TLL1-206ENST00000513213 1829 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
USP11P51784 ACP2-205ENST00000527256 1499 ntTSL 2 BASIC17.01■□□□□ 0.31
USP11P51784 PURB-201ENST00000395699 9069 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
USP11P51784 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
USP11P51784 COL25A1-201ENST00000399126 2674 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
USP11P51784 TNFRSF14-AS1-201ENST00000416860 3522 ntTSL 2 BASIC17.01■□□□□ 0.31
USP11P51784 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
USP11P51784 NCR3-201ENST00000340027 1042 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
USP11P51784 RN7SKP175-201ENST00000408472 289 ntBASIC17.01■□□□□ 0.31
USP11P51784 AC004945.1-201ENST00000416738 983 ntBASIC17.01■□□□□ 0.31
USP11P51784 AL450998.2-201ENST00000418525 639 ntTSL 3 BASIC17.01■□□□□ 0.31
USP11P51784 GEMIN4-202ENST00000437269 1182 ntTSL 2 BASIC17.01■□□□□ 0.31
USP11P51784 AL031283.3-201ENST00000439788 727 ntTSL 3 BASIC17.01■□□□□ 0.31
USP11P51784 YBX1P6-201ENST00000442962 1002 ntBASIC17.01■□□□□ 0.31
USP11P51784 CNN2P10-201ENST00000443067 918 ntBASIC17.01■□□□□ 0.31
USP11P51784 MFF-223ENST00000524634 647 ntTSL 2 BASIC17.01■□□□□ 0.31
USP11P51784 AC073413.1-201ENST00000603927 732 ntBASIC17.01■□□□□ 0.31
USP11P51784 CYP4F22-201ENST00000269703 2641 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
USP11P51784 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
USP11P51784 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
USP11P51784 LMBRD1-202ENST00000370577 2209 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
USP11P51784 CDR2L-201ENST00000337231 3536 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
USP11P51784 RMND1-202ENST00000367303 1854 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
USP11P51784 AGPAT1-201ENST00000336984 2021 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
USP11P51784 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
USP11P51784 NTRK3-203ENST00000357724 2980 ntTSL 5 BASIC17.01■□□□□ 0.31
USP11P51784 SUMO1-203ENST00000392246 1536 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
USP11P51784 UGGT2-204ENST00000397618 1547 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 66.4 ms