Protein–RNA interactions for Protein: P49662

CASP4, Caspase-4, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4P49662 SNAI3-AS1-206ENST00000569786 588 ntTSL 3 BASIC16.48■□□□□ 0.23
CASP4P49662 AC009486.1-201ENST00000569860 813 ntBASIC16.48■□□□□ 0.23
CASP4P49662 AC005253.2-201ENST00000593791 432 ntTSL 3 BASIC16.48■□□□□ 0.23
CASP4P49662 AC073389.2-202ENST00000607450 441 ntTSL 5 BASIC16.48■□□□□ 0.23
CASP4P49662 HSD17B6-201ENST00000322165 1512 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CASP4P49662 AC018716.2-201ENST00000528390 2597 ntTSL 2 BASIC16.48■□□□□ 0.23
CASP4P49662 SEPT9-244ENST00000592420 2588 ntTSL 2 BASIC16.48■□□□□ 0.23
CASP4P49662 SLC4A9-203ENST00000506545 2838 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
CASP4P49662 ABCG4-205ENST00000619701 3852 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CASP4P49662 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC16.48■□□□□ 0.23
CASP4P49662 FAM160A2-203ENST00000524416 3327 ntTSL 2 BASIC16.48■□□□□ 0.23
CASP4P49662 PFKFB4-201ENST00000232375 3586 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CASP4P49662 C3orf62-201ENST00000343010 4235 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
CASP4P49662 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
CASP4P49662 FAM118B-210ENST00000627851 1862 ntTSL 5 BASIC16.48■□□□□ 0.23
CASP4P49662 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC16.48■□□□□ 0.23
CASP4P49662 NRIP1-203ENST00000400202 7671 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
CASP4P49662 B4GALNT1-201ENST00000341156 3036 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CASP4P49662 PKIG-204ENST00000372889 1489 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
CASP4P49662 SCYL1-201ENST00000270176 2642 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CASP4P49662 HMBOX1-210ENST00000523613 1730 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
CASP4P49662 SNRNP27-202ENST00000409116 1339 ntTSL 5 BASIC16.47■□□□□ 0.23
CASP4P49662 AC134312.5-201ENST00000568031 1313 ntBASIC16.47■□□□□ 0.23
CASP4P49662 AIFM2-202ENST00000373248 2570 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CASP4P49662 PCDHGB1-202ENST00000611598 2592 ntAPPRIS ALT2 BASIC16.47■□□□□ 0.23
CASP4P49662 VARS2-201ENST00000321897 4073 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
CASP4P49662 OPCML-IT1-201ENST00000533859 2936 ntTSL 2 BASIC16.47■□□□□ 0.23
CASP4P49662 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
CASP4P49662 SLC25A2-201ENST00000239451 1417 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
CASP4P49662 PTPN5-204ENST00000396170 3871 ntTSL 2 BASIC16.47■□□□□ 0.23
CASP4P49662 DCUN1D2-201ENST00000332592 2626 ntTSL 2 BASIC16.47■□□□□ 0.23
CASP4P49662 ECSIT-201ENST00000252440 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
CASP4P49662 UEVLD-201ENST00000300038 995 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
CASP4P49662 KRTAP19-3-201ENST00000334063 522 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
CASP4P49662 COPE-202ENST00000349893 948 ntTSL 2 BASIC16.47■□□□□ 0.23
CASP4P49662 AC099754.1-201ENST00000435884 454 ntTSL 3 BASIC16.47■□□□□ 0.23
CASP4P49662 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC16.47■□□□□ 0.23
CASP4P49662 AC011495.1-201ENST00000498085 584 ntBASIC16.47■□□□□ 0.23
CASP4P49662 AC106760.1-201ENST00000508690 800 ntBASIC16.47■□□□□ 0.23
CASP4P49662 KRT18P25-201ENST00000508931 1278 ntBASIC16.47■□□□□ 0.23
CASP4P49662 CCKBR-204ENST00000531712 463 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
CASP4P49662 AC008735.3-201ENST00000596646 500 ntBASIC16.47■□□□□ 0.23
CASP4P49662 AC233723.1-201ENST00000635921 386 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
CASP4P49662 SLC35C2-204ENST00000372230 2246 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CASP4P49662 FDFT1-202ENST00000443614 1393 ntTSL 2 BASIC16.47■□□□□ 0.23
CASP4P49662 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC16.47■□□□□ 0.23
CASP4P49662 AC018665.1-201ENST00000622927 1362 ntBASIC16.47■□□□□ 0.23
CASP4P49662 GAS2L2-203ENST00000618498 2655 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
CASP4P49662 FOXJ2-201ENST00000162391 5523 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
CASP4P49662 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC16.47■□□□□ 0.23
CASP4P49662 NTMT1-204ENST00000372486 1487 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
CASP4P49662 KIAA1211-203ENST00000504228 4628 ntAPPRIS P2 TSL 5 BASIC16.47■□□□□ 0.23
CASP4P49662 GPANK1-203ENST00000375896 1910 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CASP4P49662 LMNA-201ENST00000347559 3137 ntTSL 5 BASIC16.46■□□□□ 0.23
CASP4P49662 TPD52-201ENST00000379096 4041 ntAPPRIS ALT1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CASP4P49662 CTBP1-AS2-205ENST00000578730 2757 ntTSL 2 BASIC16.46■□□□□ 0.23
CASP4P49662 AC067930.6-201ENST00000623257 4947 ntBASIC16.46■□□□□ 0.23
CASP4P49662 AGTPBP1-208ENST00000628899 4222 ntTSL 2 BASIC16.46■□□□□ 0.23
CASP4P49662 PPP1R16B-202ENST00000373331 6106 ntTSL 5 BASIC16.46■□□□□ 0.23
CASP4P49662 TAF1C-216ENST00000566732 2972 ntAPPRIS ALT2 TSL 2 BASIC16.46■□□□□ 0.23
CASP4P49662 N4BP1-201ENST00000262384 7106 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CASP4P49662 PAAF1-207ENST00000536003 1639 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
CASP4P49662 MAPK7-203ENST00000395602 3059 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CASP4P49662 PNPLA5-204ENST00000593866 2197 ntTSL 2 BASIC16.46■□□□□ 0.23
CASP4P49662 OSBPL5-210ENST00000525498 2733 ntTSL 2 BASIC16.46■□□□□ 0.23
CASP4P49662 HOPX-203ENST00000381255 1164 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
CASP4P49662 NDUFC1-203ENST00000394228 761 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
CASP4P49662 GRAP-202ENST00000395635 834 ntTSL 2 BASIC16.46■□□□□ 0.23
CASP4P49662 NGDN-202ENST00000408901 1143 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
CASP4P49662 TTTY23B-201ENST00000442790 549 ntBASIC16.46■□□□□ 0.23
CASP4P49662 GNLY-210ENST00000524600 750 ntAPPRIS ALT2 TSL 2 BASIC16.46■□□□□ 0.23
CASP4P49662 AC068587.3-201ENST00000526613 355 ntBASIC16.46■□□□□ 0.23
CASP4P49662 NEU3-203ENST00000529024 581 ntTSL 3 BASIC16.46■□□□□ 0.23
CASP4P49662 HOPX-210ENST00000553379 1001 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
CASP4P49662 LINC01595-201ENST00000555406 639 ntTSL 3 BASIC16.46■□□□□ 0.23
CASP4P49662 HOPX-212ENST00000555760 1139 ntAPPRIS P1 TSL 3 BASIC16.46■□□□□ 0.23
CASP4P49662 HOPX-213ENST00000556376 1064 ntAPPRIS P1 TSL 3 BASIC16.46■□□□□ 0.23
CASP4P49662 AC005225.4-201ENST00000557330 545 ntBASIC16.46■□□□□ 0.23
CASP4P49662 AC243562.3-201ENST00000559866 1212 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
CASP4P49662 AC099482.1-201ENST00000563471 481 ntTSL 2 BASIC16.46■□□□□ 0.23
CASP4P49662 AC138474.1-201ENST00000586630 523 ntTSL 3 BASIC16.46■□□□□ 0.23
CASP4P49662 PPP1R14A-203ENST00000587515 607 ntTSL 2 BASIC16.46■□□□□ 0.23
CASP4P49662 SMIM24-203ENST00000587847 820 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
CASP4P49662 AC012645.4-201ENST00000610691 1061 ntBASIC16.46■□□□□ 0.23
CASP4P49662 SPIN2A-203ENST00000614076 966 ntTSL 3 BASIC16.46■□□□□ 0.23
CASP4P49662 AC145423.3-201ENST00000615987 467 ntBASIC16.46■□□□□ 0.23
CASP4P49662 AC244517.11-204ENST00000624424 760 ntTSL 5 BASIC16.46■□□□□ 0.23
CASP4P49662 CYB561A3-203ENST00000447532 1803 ntTSL 5 BASIC16.46■□□□□ 0.23
CASP4P49662 FBLN7-203ENST00000409450 1394 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
CASP4P49662 TOX3-201ENST00000219746 3233 ntAPPRIS P4 TSL 2 BASIC16.46■□□□□ 0.23
CASP4P49662 A1BG-AS1-204ENST00000595302 2130 ntTSL 2 BASIC16.46■□□□□ 0.23
CASP4P49662 CCDC51-204ENST00000442740 1554 ntTSL 3 BASIC16.46■□□□□ 0.23
CASP4P49662 VWA7-201ENST00000375688 2881 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
CASP4P49662 SCLY-202ENST00000409736 1774 ntTSL 1 (best) BASIC16.46■□□□□ 0.22
CASP4P49662 HEATR3-201ENST00000299192 3560 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
CASP4P49662 AC015656.1-201ENST00000624209 3578 ntBASIC16.46■□□□□ 0.22
CASP4P49662 AP001267.2-201ENST00000532619 2086 ntBASIC16.46■□□□□ 0.22
CASP4P49662 RRM1-214ENST00000534285 2075 ntTSL 5 BASIC16.46■□□□□ 0.22
CASP4P49662 CU639417.3-201ENST00000624240 1404 ntBASIC16.45■□□□□ 0.22
CASP4P49662 FAM45BP-202ENST00000592932 1624 ntBASIC16.45■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 59.6 ms