Protein–RNA interactions for Protein: P46100

ATRX, Transcriptional regulator ATRX, humanhuman

Predictions only

Length 2,492 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATRXP46100 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
ATRXP46100 RYR1-202ENST00000359596 15117 ntAPPRIS P3 TSL 5 BASIC13.62□□□□□ -0.23
ATRXP46100 AL360270.3-201ENST00000609118 1348 ntBASIC13.62□□□□□ -0.23
ATRXP46100 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC13.62□□□□□ -0.23
ATRXP46100 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC13.62□□□□□ -0.23
ATRXP46100 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
ATRXP46100 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
ATRXP46100 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC13.62□□□□□ -0.23
ATRXP46100 MIR1301-201ENST00000408518 82 ntBASIC13.62□□□□□ -0.23
ATRXP46100 ADM-203ENST00000525063 867 ntAPPRIS P1 TSL 3 BASIC13.62□□□□□ -0.23
ATRXP46100 AC005865.1-202ENST00000543036 641 ntTSL 2 BASIC13.62□□□□□ -0.23
ATRXP46100 SOCS2-AS1-204ENST00000551626 618 ntTSL 4 BASIC13.62□□□□□ -0.23
ATRXP46100 MAX-211ENST00000555667 574 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
ATRXP46100 AC004637.1-201ENST00000586675 482 ntTSL 3 BASIC13.62□□□□□ -0.23
ATRXP46100 ZNF671-203ENST00000596939 977 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
ATRXP46100 AP001184.1-201ENST00000637936 376 ntBASIC13.62□□□□□ -0.23
ATRXP46100 TDRKH-204ENST00000368825 2651 ntTSL 2 BASIC13.62□□□□□ -0.23
ATRXP46100 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
ATRXP46100 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC13.62□□□□□ -0.23
ATRXP46100 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC13.62□□□□□ -0.23
ATRXP46100 SHISA9-201ENST00000423335 4043 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
ATRXP46100 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
ATRXP46100 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
ATRXP46100 BABAM2-204ENST00000379624 1657 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
ATRXP46100 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
ATRXP46100 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
ATRXP46100 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC13.62□□□□□ -0.23
ATRXP46100 FLII-221ENST00000578558 2377 ntTSL 5 BASIC13.62□□□□□ -0.23
ATRXP46100 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
ATRXP46100 ZFP36-203ENST00000597629 1786 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
ATRXP46100 KIR2DS4-201ENST00000339924 1608 ntAPPRIS P5 TSL 1 (best) BASIC13.62□□□□□ -0.23
ATRXP46100 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
ATRXP46100 AFF4-201ENST00000265343 9552 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
ATRXP46100 ECHDC2-201ENST00000358358 1126 ntTSL 2 BASIC13.62□□□□□ -0.23
ATRXP46100 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC13.62□□□□□ -0.23
ATRXP46100 AC097059.1-201ENST00000413103 885 ntTSL 5 BASIC13.62□□□□□ -0.23
ATRXP46100 AP000358.1-201ENST00000456260 156 ntBASIC13.62□□□□□ -0.23
ATRXP46100 NEU3-207ENST00000534628 746 ntTSL 2 BASIC13.62□□□□□ -0.23
ATRXP46100 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC13.62□□□□□ -0.23
ATRXP46100 DUX4L47-201ENST00000566374 394 ntBASIC13.62□□□□□ -0.23
ATRXP46100 NCR1-206ENST00000598576 996 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
ATRXP46100 HIST1H3B-201ENST00000621411 411 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
ATRXP46100 TTC23L-209ENST00000638320 1185 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
ATRXP46100 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
ATRXP46100 SPAAR-203ENST00000636776 1538 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
ATRXP46100 FLJ38576-201ENST00000623820 2459 ntBASIC13.61□□□□□ -0.23
ATRXP46100 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC13.61□□□□□ -0.23
ATRXP46100 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
ATRXP46100 FUK-201ENST00000288078 4081 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
ATRXP46100 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC13.61□□□□□ -0.23
ATRXP46100 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC13.61□□□□□ -0.23
ATRXP46100 KLHL26-201ENST00000300976 4407 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
ATRXP46100 LCOR-202ENST00000356016 4834 ntAPPRIS P3 TSL 2 BASIC13.61□□□□□ -0.23
ATRXP46100 C16orf45-209ENST00000566490 1854 ntTSL 5 BASIC13.61□□□□□ -0.23
ATRXP46100 AC005726.3-202ENST00000577814 1316 ntTSL 3 BASIC13.61□□□□□ -0.23
ATRXP46100 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
ATRXP46100 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
ATRXP46100 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
ATRXP46100 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
ATRXP46100 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
ATRXP46100 HLA-DRB5-201ENST00000374975 1260 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
ATRXP46100 HCG9-201ENST00000376800 663 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
ATRXP46100 PDCD5-202ENST00000379316 154 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
ATRXP46100 MRPL23-204ENST00000397297 613 ntTSL 2 BASIC13.61□□□□□ -0.23
ATRXP46100 LIF-202ENST00000403987 592 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
ATRXP46100 PRAME-206ENST00000406503 740 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
ATRXP46100 AL121949.3-201ENST00000406684 385 ntBASIC13.61□□□□□ -0.23
ATRXP46100 FBXO36P1-201ENST00000579006 471 ntBASIC13.61□□□□□ -0.23
ATRXP46100 PDCD5-208ENST00000592786 468 ntTSL 3 BASIC13.61□□□□□ -0.23
ATRXP46100 AL136040.2-201ENST00000618431 1130 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
ATRXP46100 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
ATRXP46100 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
ATRXP46100 AC055811.4-201ENST00000624039 1754 ntBASIC13.61□□□□□ -0.23
ATRXP46100 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
ATRXP46100 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
ATRXP46100 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
ATRXP46100 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC13.61□□□□□ -0.23
ATRXP46100 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC13.61□□□□□ -0.23
ATRXP46100 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
ATRXP46100 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
ATRXP46100 AC006449.5-201ENST00000610658 2098 ntBASIC13.61□□□□□ -0.23
ATRXP46100 ANKRD24-206ENST00000600132 4026 ntAPPRIS P2 TSL 5 BASIC13.61□□□□□ -0.23
ATRXP46100 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
ATRXP46100 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
ATRXP46100 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC13.61□□□□□ -0.23
ATRXP46100 AC008536.3-201ENST00000623282 1599 ntBASIC13.61□□□□□ -0.23
ATRXP46100 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC13.61□□□□□ -0.23
ATRXP46100 AC006449.6-201ENST00000612330 2296 ntBASIC13.61□□□□□ -0.23
ATRXP46100 FH-201ENST00000366560 1797 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
ATRXP46100 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
ATRXP46100 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC13.61□□□□□ -0.23
ATRXP46100 MICAL3-206ENST00000441493 9445 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
ATRXP46100 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
ATRXP46100 ETV2-201ENST00000379023 926 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
ATRXP46100 KCNK15-AS1-202ENST00000427303 528 ntTSL 5 BASIC13.61□□□□□ -0.23
ATRXP46100 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC13.61□□□□□ -0.23
ATRXP46100 AL451000.1-201ENST00000451300 1186 ntBASIC13.61□□□□□ -0.23
ATRXP46100 RPS23-204ENST00000507980 836 ntTSL 2 BASIC13.61□□□□□ -0.23
ATRXP46100 LY6E-215ENST00000523847 427 ntTSL 3 BASIC13.61□□□□□ -0.23
ATRXP46100 TREHP1-201ENST00000531328 465 ntBASIC13.61□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 48.9 ms