Protein–RNA interactions for Protein: P41273

TNFSF9, Tumor necrosis factor ligand superfamily member 9, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF9P41273 AC004637.1-201ENST00000586675 482 ntTSL 3 BASIC16.3■□□□□ 0.2
TNFSF9P41273 TNNT1-212ENST00000588981 1163 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
TNFSF9P41273 SCP2-217ENST00000640998 1101 ntTSL 5 BASIC16.3■□□□□ 0.2
TNFSF9P41273 C19orf57-201ENST00000346736 2489 ntAPPRIS P2 TSL 2 BASIC16.3■□□□□ 0.2
TNFSF9P41273 SIGLEC11-202ENST00000426971 2479 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
TNFSF9P41273 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC16.3■□□□□ 0.2
TNFSF9P41273 LETMD1-206ENST00000547008 1665 ntTSL 2 BASIC16.3■□□□□ 0.2
TNFSF9P41273 CRLS1-203ENST00000452938 3859 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
TNFSF9P41273 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TNFSF9P41273 INHBA-203ENST00000442711 1632 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TNFSF9P41273 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TNFSF9P41273 CDH20-203ENST00000538374 2683 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TNFSF9P41273 YIPF3-202ENST00000372422 1576 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TNFSF9P41273 ACBD5-202ENST00000375897 4173 ntAPPRIS ALT2 TSL 2 BASIC16.3■□□□□ 0.2
TNFSF9P41273 PCYOX1-201ENST00000264441 2959 ntTSL 5 BASIC16.29■□□□□ 0.2
TNFSF9P41273 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
TNFSF9P41273 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC16.29■□□□□ 0.2
TNFSF9P41273 KRT8P4-201ENST00000509735 1454 ntBASIC16.29■□□□□ 0.2
TNFSF9P41273 KLK5-202ENST00000391809 1405 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TNFSF9P41273 SCAMP4-202ENST00000409472 2394 ntTSL 2 BASIC16.29■□□□□ 0.2
TNFSF9P41273 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
TNFSF9P41273 YWHAE-208ENST00000571732 1818 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
TNFSF9P41273 API5-203ENST00000455725 2257 ntTSL 2 BASIC16.29■□□□□ 0.2
TNFSF9P41273 EXOC7-213ENST00000467929 2260 ntTSL 2 BASIC16.29■□□□□ 0.2
TNFSF9P41273 STAT1-203ENST00000392323 2723 ntAPPRIS ALT1 TSL 2 BASIC16.29■□□□□ 0.2
TNFSF9P41273 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
TNFSF9P41273 MSTO1-202ENST00000368341 2245 ntTSL 2 BASIC16.29■□□□□ 0.2
TNFSF9P41273 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
TNFSF9P41273 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
TNFSF9P41273 AL138725.1-201ENST00000407347 1314 ntBASIC16.29■□□□□ 0.2
TNFSF9P41273 PPP2R5D-208ENST00000485511 3044 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
TNFSF9P41273 SLC32A1-201ENST00000217420 2574 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TNFSF9P41273 SCYL1-208ENST00000527009 2586 ntTSL 5 BASIC16.29■□□□□ 0.2
TNFSF9P41273 CBY1-201ENST00000216029 1133 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TNFSF9P41273 ANGPTL8-201ENST00000252453 872 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TNFSF9P41273 NPPC-201ENST00000295440 500 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TNFSF9P41273 CIDEC-201ENST00000336832 1277 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
TNFSF9P41273 FAM27C-201ENST00000377542 616 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
TNFSF9P41273 PEX13-202ENST00000401576 1108 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
TNFSF9P41273 CIDEC-203ENST00000423850 1036 ntTSL 2 BASIC16.29■□□□□ 0.2
TNFSF9P41273 RGS5-214ENST00000429865 754 ntTSL 3 BASIC16.29■□□□□ 0.2
TNFSF9P41273 CIDEC-206ENST00000455015 1123 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
TNFSF9P41273 KLC4-205ENST00000458460 1251 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
TNFSF9P41273 RPL13AP20-201ENST00000459725 609 ntBASIC16.29■□□□□ 0.2
TNFSF9P41273 OSGIN2-203ENST00000520659 801 ntTSL 2 BASIC16.29■□□□□ 0.2
TNFSF9P41273 SNHG9-201ENST00000531523 275 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
TNFSF9P41273 DYNLRB2-205ENST00000568035 409 ntTSL 5 BASIC16.29■□□□□ 0.2
TNFSF9P41273 AP002360.2-202ENST00000572035 738 ntTSL 3 BASIC16.29■□□□□ 0.2
TNFSF9P41273 PPY2P-201ENST00000582808 702 ntBASIC16.29■□□□□ 0.2
TNFSF9P41273 PPY2P-202ENST00000583761 657 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
TNFSF9P41273 ANGPTL8-203ENST00000591200 504 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
TNFSF9P41273 STXBP2-221ENST00000602355 716 ntTSL 2 BASIC16.29■□□□□ 0.2
TNFSF9P41273 ANGPTL8-204ENST00000616433 1223 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TNFSF9P41273 RGS3-201ENST00000317613 2542 ntTSL 2 BASIC16.29■□□□□ 0.2
TNFSF9P41273 FARS2-202ENST00000324331 1692 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TNFSF9P41273 RHPN1-201ENST00000289013 3683 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TNFSF9P41273 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
TNFSF9P41273 WNT16-201ENST00000222462 3147 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TNFSF9P41273 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC16.29■□□□□ 0.2
TNFSF9P41273 PGA5-201ENST00000312403 1519 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TNFSF9P41273 AL162231.1-201ENST00000421828 1525 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
TNFSF9P41273 ADORA1-204ENST00000367236 3407 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TNFSF9P41273 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
TNFSF9P41273 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC16.29■□□□□ 0.2
TNFSF9P41273 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
TNFSF9P41273 NEBL-203ENST00000417816 3008 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TNFSF9P41273 DNAH14-204ENST00000366849 2215 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
TNFSF9P41273 HVCN1-202ENST00000356742 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TNFSF9P41273 ZNF586-203ENST00000396154 2163 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TNFSF9P41273 PLAGL1-206ENST00000416623 3237 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TNFSF9P41273 AP000593.2-201ENST00000542775 1433 ntBASIC16.28■□□□□ 0.2
TNFSF9P41273 NDRG2-226ENST00000554104 2146 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
TNFSF9P41273 A1BG-AS1-204ENST00000595302 2130 ntTSL 2 BASIC16.28■□□□□ 0.2
TNFSF9P41273 LAT2-202ENST00000344995 2363 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
TNFSF9P41273 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
TNFSF9P41273 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
TNFSF9P41273 BUD31-202ENST00000403633 1139 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TNFSF9P41273 RN7SKP175-201ENST00000408472 289 ntBASIC16.28■□□□□ 0.2
TNFSF9P41273 AL157392.1-201ENST00000412388 373 ntTSL 2 BASIC16.28■□□□□ 0.2
TNFSF9P41273 AC012574.2-201ENST00000520375 443 ntTSL 3 BASIC16.28■□□□□ 0.2
TNFSF9P41273 FBXO5-202ENST00000367241 2221 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
TNFSF9P41273 PARP10-201ENST00000313028 3497 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
TNFSF9P41273 LINC01136-203ENST00000457348 2539 ntTSL 2 BASIC16.28■□□□□ 0.2
TNFSF9P41273 PSMD13-203ENST00000431206 1591 ntTSL 2 BASIC16.28■□□□□ 0.2
TNFSF9P41273 ATF7-205ENST00000548446 1892 ntAPPRIS ALT1 TSL 2 BASIC16.28■□□□□ 0.2
TNFSF9P41273 KRT17-201ENST00000311208 1524 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TNFSF9P41273 HSPB7-202ENST00000375718 2415 ntTSL 2 BASIC16.28■□□□□ 0.2
TNFSF9P41273 WDR20-205ENST00000424963 2695 ntTSL 5 BASIC16.28■□□□□ 0.2
TNFSF9P41273 HORMAD1-201ENST00000322343 1771 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
TNFSF9P41273 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TNFSF9P41273 PXN-201ENST00000228307 3785 ntAPPRIS P4 TSL 1 (best) BASIC16.28■□□□□ 0.2
TNFSF9P41273 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
TNFSF9P41273 CYP4F11-202ENST00000326742 2877 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
TNFSF9P41273 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC16.28■□□□□ 0.2
TNFSF9P41273 EXO5-203ENST00000372703 2567 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
TNFSF9P41273 FER1L4-210ENST00000615531 5998 ntBASIC16.28■□□□□ 0.2
TNFSF9P41273 BMP1-203ENST00000354870 3989 ntTSL 5 BASIC16.28■□□□□ 0.2
TNFSF9P41273 AC018529.2-202ENST00000611482 3087 ntBASIC16.27■□□□□ 0.2
TNFSF9P41273 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
TNFSF9P41273 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 35.6 ms