Protein–RNA interactions for Protein: P40939

HADHA, Trifunctional enzyme subunit alpha, mitochondrial, humanhuman

Predictions only

Length 763 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HADHAP40939 COX11-202ENST00000571584 1108 ntTSL 2 BASIC15.36■□□□□ 0.05
HADHAP40939 AC005785.1-202ENST00000597164 237 ntTSL 3 BASIC15.36■□□□□ 0.05
HADHAP40939 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC15.36■□□□□ 0.05
HADHAP40939 NDUFS7-218ENST00000618074 688 ntTSL 5 BASIC15.36■□□□□ 0.05
HADHAP40939 NDUFS7-219ENST00000620479 754 ntTSL 5 BASIC15.36■□□□□ 0.05
HADHAP40939 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC15.36■□□□□ 0.05
HADHAP40939 TEX28-203ENST00000617225 1525 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
HADHAP40939 CDH23-202ENST00000299366 3954 ntTSL 5 BASIC15.36■□□□□ 0.05
HADHAP40939 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
HADHAP40939 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
HADHAP40939 GSG1L-203ENST00000447459 4916 ntAPPRIS P3 TSL 2 BASIC15.36■□□□□ 0.05
HADHAP40939 MOCS1-201ENST00000340692 2747 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
HADHAP40939 HM13-201ENST00000335574 1809 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
HADHAP40939 PPP6R1-203ENST00000587283 2953 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
HADHAP40939 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
HADHAP40939 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC15.36■□□□□ 0.05
HADHAP40939 TRPV4-201ENST00000261740 3233 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
HADHAP40939 ZNF559-202ENST00000393883 5095 ntAPPRIS P3 TSL 2 BASIC15.36■□□□□ 0.05
HADHAP40939 ZNF212-201ENST00000335870 2810 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
HADHAP40939 WASH2P-202ENST00000538033 2800 ntTSL 2 BASIC15.35■□□□□ 0.05
HADHAP40939 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC15.35■□□□□ 0.05
HADHAP40939 ASF1A-201ENST00000229595 2362 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
HADHAP40939 SCLT1-209ENST00000511426 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
HADHAP40939 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
HADHAP40939 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
HADHAP40939 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
HADHAP40939 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC15.35■□□□□ 0.05
HADHAP40939 TNFSF13-201ENST00000338784 1971 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
HADHAP40939 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC15.35■□□□□ 0.05
HADHAP40939 C19orf57-201ENST00000346736 2489 ntAPPRIS P2 TSL 2 BASIC15.35■□□□□ 0.05
HADHAP40939 UHRF2-201ENST00000276893 3452 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
HADHAP40939 ZNF497-201ENST00000311044 3468 ntAPPRIS P1 TSL 2 BASIC15.35■□□□□ 0.05
HADHAP40939 AC067750.1-201ENST00000608826 6545 ntBASIC15.35■□□□□ 0.05
HADHAP40939 LINC00937-207ENST00000544461 3033 ntTSL 2 BASIC15.35■□□□□ 0.05
HADHAP40939 NOX3-201ENST00000159060 2042 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
HADHAP40939 IL9R-202ENST00000369423 2032 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
HADHAP40939 NDUFA2-201ENST00000252102 804 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
HADHAP40939 MRPL55-215ENST00000366742 630 ntAPPRIS P1 TSL 2 BASIC15.35■□□□□ 0.05
HADHAP40939 RNASEH1-AS1-202ENST00000438436 1218 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
HADHAP40939 MYCLP2-201ENST00000449268 967 ntBASIC15.35■□□□□ 0.05
HADHAP40939 SELENOT-203ENST00000477889 944 ntTSL 5 BASIC15.35■□□□□ 0.05
HADHAP40939 C5orf66-202ENST00000507641 547 ntTSL 3 BASIC15.35■□□□□ 0.05
HADHAP40939 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC15.35■□□□□ 0.05
HADHAP40939 AP001107.3-201ENST00000534065 544 ntTSL 4 BASIC15.35■□□□□ 0.05
HADHAP40939 API5-211ENST00000534695 560 ntTSL 5 BASIC15.35■□□□□ 0.05
HADHAP40939 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC15.35■□□□□ 0.05
HADHAP40939 ZNF710-AS1-201ENST00000558334 1168 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
HADHAP40939 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC15.35■□□□□ 0.05
HADHAP40939 AC120045.2-201ENST00000567334 178 ntBASIC15.35■□□□□ 0.05
HADHAP40939 AC140912.1-201ENST00000577171 1054 ntBASIC15.35■□□□□ 0.05
HADHAP40939 MIR8072-201ENST00000614241 80 ntBASIC15.35■□□□□ 0.05
HADHAP40939 RBP1-207ENST00000619087 516 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
HADHAP40939 AC007431.3-201ENST00000623221 587 ntBASIC15.35■□□□□ 0.05
HADHAP40939 SRSF5-203ENST00000553521 2815 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
HADHAP40939 AIFM2-202ENST00000373248 2570 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
HADHAP40939 SEPT9-244ENST00000592420 2588 ntTSL 2 BASIC15.35■□□□□ 0.05
HADHAP40939 PTPN5-204ENST00000396170 3871 ntTSL 2 BASIC15.35■□□□□ 0.05
HADHAP40939 VWA7-201ENST00000375688 2881 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
HADHAP40939 AC007787.1-201ENST00000588095 1583 ntBASIC15.35■□□□□ 0.05
HADHAP40939 RGR-201ENST00000358110 1349 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
HADHAP40939 IDH3G-212ENST00000619865 1339 ntTSL 5 BASIC15.35■□□□□ 0.05
HADHAP40939 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
HADHAP40939 PLLP-205ENST00000613167 7578 ntTSL 5 BASIC15.35■□□□□ 0.05
HADHAP40939 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
HADHAP40939 TRIM71-201ENST00000383763 8685 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
HADHAP40939 RBBP8-201ENST00000327155 3288 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
HADHAP40939 NATD1-201ENST00000611551 4931 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
HADHAP40939 GNAO1-202ENST00000262494 5767 ntAPPRIS ALT1 TSL 1 (best) BASIC15.35■□□□□ 0.05
HADHAP40939 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
HADHAP40939 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
HADHAP40939 MAEL-202ENST00000367872 1908 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
HADHAP40939 ZNF385A-205ENST00000546970 2494 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
HADHAP40939 ZBTB17-201ENST00000375733 2770 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
HADHAP40939 ST3GAL3-208ENST00000361392 2243 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
HADHAP40939 PTPRU-204ENST00000428026 5550 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
HADHAP40939 PTGES3L-AARSD1-202ENST00000409103 1670 ntTSL 5 BASIC15.35■□□□□ 0.05
HADHAP40939 JADE2-203ENST00000395003 6465 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
HADHAP40939 RRP1B-201ENST00000340648 5090 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
HADHAP40939 LMNA-201ENST00000347559 3137 ntTSL 5 BASIC15.34■□□□□ 0.05
HADHAP40939 FAM84B-201ENST00000304916 5404 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
HADHAP40939 IMPDH1-203ENST00000354269 2580 ntTSL 2 BASIC15.34■□□□□ 0.05
HADHAP40939 AC140479.7-201ENST00000636301 2332 ntBASIC15.34■□□□□ 0.05
HADHAP40939 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
HADHAP40939 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
HADHAP40939 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
HADHAP40939 AGAP4-208ENST00000618171 2387 ntTSL 5 BASIC15.34■□□□□ 0.05
HADHAP40939 AC005912.2-201ENST00000619492 2400 ntBASIC15.34■□□□□ 0.05
HADHAP40939 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
HADHAP40939 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC15.34■□□□□ 0.05
HADHAP40939 EOMES-201ENST00000295743 3386 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
HADHAP40939 H6PD-203ENST00000602477 5590 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
HADHAP40939 TCEAL4-209ENST00000472745 1571 ntAPPRIS P3 TSL 5 BASIC15.34■□□□□ 0.05
HADHAP40939 SNCA-205ENST00000394991 1290 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
HADHAP40939 MIOX-203ENST00000395733 1021 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
HADHAP40939 C1QBPP1-201ENST00000400117 770 ntBASIC15.34■□□□□ 0.05
HADHAP40939 SOCS2P1-201ENST00000417727 557 ntBASIC15.34■□□□□ 0.05
HADHAP40939 TMEM147-AS1-201ENST00000444728 487 ntTSL 3 BASIC15.34■□□□□ 0.05
HADHAP40939 S100A6-205ENST00000496817 673 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
HADHAP40939 AC008750.2-202ENST00000532688 729 ntTSL 3 BASIC15.34■□□□□ 0.05
HADHAP40939 AL132639.3-201ENST00000556537 530 ntTSL 4 BASIC15.34■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 38.8 ms