Protein–RNA interactions for Protein: P05067

APP, Amyloid-beta A4 protein, humanhuman

Predictions only

Length 770 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APPP05067 OPCML-IT1-201ENST00000533859 2936 ntTSL 2 BASIC18.2■□□□□ 0.5
APPP05067 FAM86B1-216ENST00000533852 2043 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
APPP05067 WASH3P-207ENST00000560956 1394 ntBASIC18.2■□□□□ 0.5
APPP05067 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
APPP05067 PDIA3P1-201ENST00000471856 1510 ntBASIC18.2■□□□□ 0.5
APPP05067 PHLDA1-201ENST00000266671 8069 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
APPP05067 ANKRD50-202ENST00000515641 4212 ntTSL 2 BASIC18.2■□□□□ 0.5
APPP05067 SUMF2-205ENST00000413756 1171 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
APPP05067 TMEM107-204ENST00000437139 747 ntAPPRIS ALT1 TSL 1 (best) BASIC18.2■□□□□ 0.5
APPP05067 LIMS3-201ENST00000437679 1220 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
APPP05067 ATP5G2P4-201ENST00000442175 420 ntBASIC18.2■□□□□ 0.5
APPP05067 SVIL-AS1-208ENST00000446807 1007 ntTSL 3 BASIC18.2■□□□□ 0.5
APPP05067 AP000345.1-201ENST00000454863 569 ntTSL 4 BASIC18.2■□□□□ 0.5
APPP05067 AL391069.3-201ENST00000455503 618 ntTSL 2 BASIC18.2■□□□□ 0.5
APPP05067 DMKN-216ENST00000458071 510 ntAPPRIS ALT2 TSL 3 BASIC18.2■□□□□ 0.5
APPP05067 AC022616.1-201ENST00000518688 554 ntBASIC18.2■□□□□ 0.5
APPP05067 SPATA21-206ENST00000612240 603 ntTSL 5 BASIC18.2■□□□□ 0.5
APPP05067 AC244669.2-201ENST00000612320 853 ntBASIC18.2■□□□□ 0.5
APPP05067 ARID1B-222ENST00000637003 1290 ntTSL 5 BASIC18.2■□□□□ 0.5
APPP05067 ST7L-202ENST00000358039 4528 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
APPP05067 RASA4B-207ENST00000541662 2794 ntAPPRIS P2 TSL 2 BASIC18.2■□□□□ 0.5
APPP05067 ELP6-201ENST00000296149 1401 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
APPP05067 AQP1-201ENST00000311813 2913 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
APPP05067 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC18.2■□□□□ 0.5
APPP05067 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
APPP05067 ZNF331-217ENST00000512387 2130 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
APPP05067 CYP51A1-201ENST00000003100 3210 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
APPP05067 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
APPP05067 AL137783.1-201ENST00000623494 1896 ntBASIC18.2■□□□□ 0.5
APPP05067 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
APPP05067 WASHC2A-202ENST00000314664 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
APPP05067 XPO6-201ENST00000304658 4422 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
APPP05067 CATSPER2P1-203ENST00000429276 1466 ntTSL 2 BASIC18.2■□□□□ 0.5
APPP05067 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC18.2■□□□□ 0.5
APPP05067 TMED5-202ENST00000370282 6104 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
APPP05067 SOCS5-202ENST00000394861 4058 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
APPP05067 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
APPP05067 CAMKK2-203ENST00000347034 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
APPP05067 SEZ6L-209ENST00000529632 6534 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
APPP05067 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
APPP05067 COPS7B-224ENST00000620578 2500 ntTSL 2 BASIC18.19■□□□□ 0.5
APPP05067 HSD17B6-201ENST00000322165 1512 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
APPP05067 PRR19-201ENST00000341747 1530 ntAPPRIS P2 TSL 5 BASIC18.19■□□□□ 0.5
APPP05067 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC18.19■□□□□ 0.5
APPP05067 TEX28-203ENST00000617225 1525 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
APPP05067 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
APPP05067 UBE4B-201ENST00000253251 4772 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
APPP05067 OTULIN-201ENST00000284274 7800 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
APPP05067 CMA1-202ENST00000250378 937 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
APPP05067 HSPH1-201ENST00000320027 5191 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
APPP05067 SULT2B1-202ENST00000323090 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
APPP05067 ZNRD1-201ENST00000332435 864 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
APPP05067 NDUFC1-201ENST00000394223 598 ntAPPRIS P1 TSL 3 BASIC18.19■□□□□ 0.5
APPP05067 IFT20-203ENST00000395418 825 ntAPPRIS P4 TSL 1 (best) BASIC18.19■□□□□ 0.5
APPP05067 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
APPP05067 MIR1909-201ENST00000411312 80 ntBASIC18.19■□□□□ 0.5
APPP05067 KIF9-205ENST00000432493 633 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
APPP05067 RALY-AS1-203ENST00000440595 660 ntTSL 3 BASIC18.19■□□□□ 0.5
APPP05067 AAMDC-206ENST00000526415 579 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
APPP05067 IL32-222ENST00000533097 814 ntAPPRIS P4 TSL 2 BASIC18.19■□□□□ 0.5
APPP05067 FOS-202ENST00000535987 1402 ntTSL 2 BASIC18.19■□□□□ 0.5
APPP05067 GNRHR2-203ENST00000581100 1187 ntBASIC18.19■□□□□ 0.5
APPP05067 IFT20-216ENST00000588477 774 ntTSL 5 BASIC18.19■□□□□ 0.5
APPP05067 ZNF790-AS1-204ENST00000589556 650 ntTSL 2 BASIC18.19■□□□□ 0.5
APPP05067 KRTAP10-7-201ENST00000609664 1578 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
APPP05067 RIC8A-217ENST00000626818 159 ntTSL 5 BASIC18.19■□□□□ 0.5
APPP05067 IER3IP1-202ENST00000639845 832 ntTSL 2 BASIC18.19■□□□□ 0.5
APPP05067 IL32-201ENST00000008180 1056 ntAPPRIS ALT2 TSL 2 BASIC18.19■□□□□ 0.5
APPP05067 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
APPP05067 AC023157.3-201ENST00000619086 2088 ntBASIC18.19■□□□□ 0.5
APPP05067 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
APPP05067 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
APPP05067 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
APPP05067 NOTCH4-201ENST00000375023 6745 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
APPP05067 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
APPP05067 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
APPP05067 IL12RB2-206ENST00000544434 3782 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
APPP05067 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
APPP05067 GRB2-201ENST00000316615 3181 ntTSL 5 BASIC18.18■□□□□ 0.5
APPP05067 INTS14-204ENST00000442903 1863 ntTSL 2 BASIC18.18■□□□□ 0.5
APPP05067 AC097376.2-205ENST00000610159 5334 ntBASIC18.18■□□□□ 0.5
APPP05067 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
APPP05067 SPTLC2-201ENST00000216484 8170 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
APPP05067 MIIP-201ENST00000235332 1573 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
APPP05067 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
APPP05067 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
APPP05067 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC18.18■□□□□ 0.5
APPP05067 C1orf43-205ENST00000368519 1163 ntTSL 2 BASIC18.18■□□□□ 0.5
APPP05067 C10orf62-201ENST00000370640 1208 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
APPP05067 BOLA2P3-201ENST00000404566 256 ntBASIC18.18■□□□□ 0.5
APPP05067 LSM5-207ENST00000410044 687 ntTSL 3 BASIC18.18■□□□□ 0.5
APPP05067 AL121983.1-201ENST00000424181 335 ntTSL 2 BASIC18.18■□□□□ 0.5
APPP05067 AL357497.1-201ENST00000436249 666 ntTSL 3 BASIC18.18■□□□□ 0.5
APPP05067 IQCF3-202ENST00000440739 505 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
APPP05067 KLF2P4-201ENST00000451959 1225 ntBASIC18.18■□□□□ 0.5
APPP05067 CTBP2P5-201ENST00000454986 1264 ntBASIC18.18■□□□□ 0.5
APPP05067 NOP2-220ENST00000545915 630 ntTSL 2 BASIC18.18■□□□□ 0.5
APPP05067 EGLN2-209ENST00000594140 991 ntTSL 2 BASIC18.18■□□□□ 0.5
APPP05067 MIR6775-201ENST00000617557 69 ntBASIC18.18■□□□□ 0.5
APPP05067 WNT11-204ENST00000621122 789 ntTSL 5 BASIC18.18■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 41.7 ms