Protein–RNA interactions for Protein: P01730

CD4, T-cell surface glycoprotein CD4, humanhuman

Predictions only

Length 458 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD4P01730 PLA1A-205ENST00000494440 1775 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CD4P01730 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC16.59■□□□□ 0.25
CD4P01730 STK33-217ENST00000534493 1895 ntTSL 2 BASIC16.59■□□□□ 0.25
CD4P01730 INE2-201ENST00000630399 1874 ntBASIC16.59■□□□□ 0.25
CD4P01730 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CD4P01730 ACRBP-201ENST00000229243 1933 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CD4P01730 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
CD4P01730 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CD4P01730 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CD4P01730 MYL12B-201ENST00000237500 1210 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CD4P01730 OR1J1-201ENST00000259357 969 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
CD4P01730 ALG1L-201ENST00000340333 805 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
CD4P01730 AK6-201ENST00000380818 1183 ntTSL 2 BASIC16.59■□□□□ 0.25
CD4P01730 HNRNPA1P41-201ENST00000397777 928 ntBASIC16.59■□□□□ 0.25
CD4P01730 AC098935.1-201ENST00000446057 611 ntBASIC16.59■□□□□ 0.25
CD4P01730 AC092800.1-201ENST00000449492 579 ntTSL 2 BASIC16.59■□□□□ 0.25
CD4P01730 HLA-J-204ENST00000495278 958 ntBASIC16.59■□□□□ 0.25
CD4P01730 AC090735.1-201ENST00000523881 488 ntTSL 4 BASIC16.59■□□□□ 0.25
CD4P01730 AHNAK-205ENST00000530124 701 ntAPPRIS ALT2 TSL 3 BASIC16.59■□□□□ 0.25
CD4P01730 SNHG14-213ENST00000551077 638 ntTSL 5 BASIC16.59■□□□□ 0.25
CD4P01730 AC009779.1-201ENST00000551138 283 ntBASIC16.59■□□□□ 0.25
CD4P01730 SAXO2-207ENST00000566861 404 ntAPPRIS ALT2 TSL 2 BASIC16.59■□□□□ 0.25
CD4P01730 AC011825.3-201ENST00000583184 565 ntTSL 5 BASIC16.59■□□□□ 0.25
CD4P01730 ZNF586-206ENST00000599802 581 ntTSL 3 BASIC16.59■□□□□ 0.25
CD4P01730 ALG1L-202ENST00000611639 701 ntAPPRIS ALT2 TSL 3 BASIC16.59■□□□□ 0.25
CD4P01730 BRMS1-202ENST00000425825 1363 ntTSL 5 BASIC16.59■□□□□ 0.25
CD4P01730 MAPK13-203ENST00000373766 6196 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CD4P01730 E2F3P2-201ENST00000447755 1422 ntBASIC16.59■□□□□ 0.25
CD4P01730 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CD4P01730 PRLHR-201ENST00000239032 5446 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CD4P01730 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC16.59■□□□□ 0.25
CD4P01730 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CD4P01730 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CD4P01730 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC16.59■□□□□ 0.25
CD4P01730 TTBK1-201ENST00000259750 6932 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CD4P01730 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC16.59■□□□□ 0.25
CD4P01730 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC16.59■□□□□ 0.25
CD4P01730 DLG1-AS1-202ENST00000430666 1694 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CD4P01730 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
CD4P01730 CEP104-202ENST00000378230 6424 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
CD4P01730 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CD4P01730 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CD4P01730 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
CD4P01730 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC16.59■□□□□ 0.25
CD4P01730 LRP10-201ENST00000359591 6886 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
CD4P01730 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.25
CD4P01730 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
CD4P01730 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC16.58■□□□□ 0.25
CD4P01730 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC16.58■□□□□ 0.25
CD4P01730 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.25
CD4P01730 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC16.58■□□□□ 0.25
CD4P01730 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CD4P01730 TCL1B-201ENST00000340722 1166 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CD4P01730 TSPO2-201ENST00000373158 718 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
CD4P01730 CST9L-201ENST00000376979 959 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CD4P01730 AC245369.1-201ENST00000390634 434 ntAPPRIS P1 BASIC16.58■□□□□ 0.24
CD4P01730 MIR663AHG-201ENST00000427348 1213 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
CD4P01730 FAM58BP-201ENST00000439056 645 ntBASIC16.58■□□□□ 0.24
CD4P01730 VDAC1P1-201ENST00000439229 848 ntBASIC16.58■□□□□ 0.24
CD4P01730 FGFR3P1-201ENST00000449999 601 ntBASIC16.58■□□□□ 0.24
CD4P01730 FBXO24-204ENST00000465843 957 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
CD4P01730 AC117500.3-201ENST00000537032 666 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
CD4P01730 MIR4754-201ENST00000582477 89 ntBASIC16.58■□□□□ 0.24
CD4P01730 WDR7-208ENST00000589935 544 ntTSL 4 BASIC16.58■□□□□ 0.24
CD4P01730 AC138696.2-201ENST00000607376 223 ntBASIC16.58■□□□□ 0.24
CD4P01730 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC16.58■□□□□ 0.24
CD4P01730 NR2F2-AS1-215ENST00000620029 1223 ntTSL 5 BASIC16.58■□□□□ 0.24
CD4P01730 IGHV1OR21-1-201ENST00000622028 353 ntAPPRIS P1 BASIC16.58■□□□□ 0.24
CD4P01730 PTOV1-214ENST00000600603 1443 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
CD4P01730 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
CD4P01730 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
CD4P01730 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CD4P01730 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC16.58■□□□□ 0.24
CD4P01730 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC16.58■□□□□ 0.24
CD4P01730 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC16.58■□□□□ 0.24
CD4P01730 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
CD4P01730 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
CD4P01730 AC087481.3-201ENST00000602886 1894 ntBASIC16.58■□□□□ 0.24
CD4P01730 AC009093.2-202ENST00000620513 2079 ntBASIC16.58■□□□□ 0.24
CD4P01730 EXOC7-213ENST00000467929 2260 ntTSL 2 BASIC16.58■□□□□ 0.24
CD4P01730 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
CD4P01730 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
CD4P01730 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
CD4P01730 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CD4P01730 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC16.57■□□□□ 0.24
CD4P01730 ADORA1-204ENST00000367236 3407 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CD4P01730 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
CD4P01730 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC16.57■□□□□ 0.24
CD4P01730 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC16.57■□□□□ 0.24
CD4P01730 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC16.57■□□□□ 0.24
CD4P01730 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CD4P01730 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
CD4P01730 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CD4P01730 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC16.57■□□□□ 0.24
CD4P01730 PLAG1-203ENST00000429357 1899 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CD4P01730 PCBP2-202ENST00000359462 1814 ntAPPRIS ALT1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CD4P01730 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
CD4P01730 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC16.57■□□□□ 0.24
CD4P01730 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
CD4P01730 FKBP6-201ENST00000252037 1500 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 52.7 ms