Protein–RNA interactions for Protein: O75131

CPNE3, Copine-3, humanhuman

Known RBP Predictions only

Length 537 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3O75131 GNG5-201ENST00000370641 920 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CPNE3O75131 EDN2-201ENST00000372587 1241 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CPNE3O75131 NUS1P3-201ENST00000423502 862 ntBASIC14.62□□□□□ -0.07
CPNE3O75131 RFPL4A-201ENST00000434937 1035 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
CPNE3O75131 KLC4-205ENST00000458460 1251 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
CPNE3O75131 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
CPNE3O75131 SLC45A2-204ENST00000509381 1040 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
CPNE3O75131 NME2-206ENST00000513177 692 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
CPNE3O75131 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC14.62□□□□□ -0.07
CPNE3O75131 ZNF252P-AS1-201ENST00000527067 3236 ntBASIC14.62□□□□□ -0.07
CPNE3O75131 ZNF385A-205ENST00000546970 2494 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
CPNE3O75131 AC090502.1-201ENST00000549905 748 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
CPNE3O75131 AC090502.1-204ENST00000551210 469 ntTSL 2 BASIC14.62□□□□□ -0.07
CPNE3O75131 LINC02299-201ENST00000556669 430 ntTSL 5 BASIC14.62□□□□□ -0.07
CPNE3O75131 AL133153.2-201ENST00000557524 303 ntTSL 3 BASIC14.62□□□□□ -0.07
CPNE3O75131 AC009134.1-201ENST00000571939 443 ntTSL 3 BASIC14.62□□□□□ -0.07
CPNE3O75131 ANAPC11-215ENST00000578550 599 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
CPNE3O75131 FBXL12-211ENST00000591009 1005 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
CPNE3O75131 DARS-AS1-209ENST00000594219 1420 ntTSL 5 BASIC14.62□□□□□ -0.07
CPNE3O75131 CNOT9-208ENST00000542068 3259 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
CPNE3O75131 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC14.62□□□□□ -0.07
CPNE3O75131 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
CPNE3O75131 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CPNE3O75131 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC14.62□□□□□ -0.07
CPNE3O75131 LINC01205-202ENST00000497996 1493 ntTSL 2 BASIC14.62□□□□□ -0.07
CPNE3O75131 KIF17-201ENST00000247986 3969 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
CPNE3O75131 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC14.62□□□□□ -0.07
CPNE3O75131 CRB2-201ENST00000359999 3659 ntTSL 2 BASIC14.62□□□□□ -0.07
CPNE3O75131 ZMYND15-202ENST00000433935 2411 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
CPNE3O75131 WIZ-207ENST00000599910 4609 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
CPNE3O75131 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC14.62□□□□□ -0.07
CPNE3O75131 SYT13-201ENST00000020926 5144 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CPNE3O75131 ILF3-AS1-201ENST00000591501 1983 ntBASIC14.62□□□□□ -0.07
CPNE3O75131 NRP2-203ENST00000357785 2926 ntAPPRIS P4 TSL 1 (best) BASIC14.62□□□□□ -0.07
CPNE3O75131 ZDHHC3-201ENST00000296127 3101 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
CPNE3O75131 GOLGA6L2-201ENST00000312015 1379 ntAPPRIS ALT2 TSL 2 BASIC14.61□□□□□ -0.07
CPNE3O75131 CARNMT1-202ENST00000376834 4130 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CPNE3O75131 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CPNE3O75131 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
CPNE3O75131 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
CPNE3O75131 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CPNE3O75131 CRLS1-203ENST00000452938 3859 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
CPNE3O75131 MROH1-207ENST00000528919 5234 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
CPNE3O75131 PRKD2-201ENST00000291281 3070 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
CPNE3O75131 MCL1-202ENST00000369026 3932 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CPNE3O75131 TGIF2-202ENST00000373874 3432 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
CPNE3O75131 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CPNE3O75131 UBR5-212ENST00000521922 9008 ntAPPRIS ALT1 TSL 5 BASIC14.61□□□□□ -0.07
CPNE3O75131 ATP6V0A4-201ENST00000310018 3135 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CPNE3O75131 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CPNE3O75131 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
CPNE3O75131 LHB-201ENST00000221421 514 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CPNE3O75131 DYNLRB2-201ENST00000305904 497 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CPNE3O75131 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC14.61□□□□□ -0.07
CPNE3O75131 BRWD1P1-201ENST00000401091 371 ntBASIC14.61□□□□□ -0.07
CPNE3O75131 HCG24-202ENST00000414398 717 ntTSL 3 BASIC14.61□□□□□ -0.07
CPNE3O75131 PRAP1-201ENST00000433452 971 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
CPNE3O75131 PFN2-205ENST00000461868 613 ntTSL 2 BASIC14.61□□□□□ -0.07
CPNE3O75131 POLR2F-208ENST00000470701 584 ntTSL 3 BASIC14.61□□□□□ -0.07
CPNE3O75131 AC009908.1-201ENST00000523030 412 ntTSL 3 BASIC14.61□□□□□ -0.07
CPNE3O75131 AP002992.1-201ENST00000527519 491 ntTSL 3 BASIC14.61□□□□□ -0.07
CPNE3O75131 IL32-222ENST00000533097 814 ntAPPRIS P4 TSL 2 BASIC14.61□□□□□ -0.07
CPNE3O75131 HIRIP3-204ENST00000564026 988 ntTSL 2 BASIC14.61□□□□□ -0.07
CPNE3O75131 FAM192A-212ENST00000566077 1066 ntTSL 3 BASIC14.61□□□□□ -0.07
CPNE3O75131 RN7SL219P-201ENST00000582872 296 ntBASIC14.61□□□□□ -0.07
CPNE3O75131 IL32-201ENST00000008180 1056 ntAPPRIS ALT2 TSL 2 BASIC14.61□□□□□ -0.07
CPNE3O75131 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC14.61□□□□□ -0.07
CPNE3O75131 POFUT2-214ENST00000615172 2472 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
CPNE3O75131 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC14.61□□□□□ -0.07
CPNE3O75131 USP43-202ENST00000570475 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
CPNE3O75131 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
CPNE3O75131 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CPNE3O75131 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC14.61□□□□□ -0.07
CPNE3O75131 DDX59-206ENST00000447706 2900 ntTSL 2 BASIC14.61□□□□□ -0.07
CPNE3O75131 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC14.61□□□□□ -0.07
CPNE3O75131 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
CPNE3O75131 FAM118B-210ENST00000627851 1862 ntTSL 5 BASIC14.61□□□□□ -0.07
CPNE3O75131 ITGB2-206ENST00000397852 2769 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CPNE3O75131 LRCH1-202ENST00000389797 3314 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
CPNE3O75131 INO80-201ENST00000361937 6439 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
CPNE3O75131 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
CPNE3O75131 AICDA-201ENST00000229335 2819 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
CPNE3O75131 GAD2-201ENST00000259271 2462 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CPNE3O75131 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC14.6□□□□□ -0.07
CPNE3O75131 PITPNM3-201ENST00000262483 7086 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
CPNE3O75131 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC14.6□□□□□ -0.07
CPNE3O75131 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC14.6□□□□□ -0.07
CPNE3O75131 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC14.6□□□□□ -0.07
CPNE3O75131 ARVCF-202ENST00000401994 2700 ntTSL 5 BASIC14.6□□□□□ -0.07
CPNE3O75131 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
CPNE3O75131 AC079781.5-202ENST00000641784 3743 ntBASIC14.6□□□□□ -0.07
CPNE3O75131 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
CPNE3O75131 SUCO-210ENST00000616058 5495 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
CPNE3O75131 SLC22A15-202ENST00000369503 4720 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CPNE3O75131 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC14.6□□□□□ -0.07
CPNE3O75131 FAM110C-201ENST00000327669 3760 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CPNE3O75131 EML4-201ENST00000318522 5549 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
CPNE3O75131 ITSN1-212ENST00000399367 5722 ntAPPRIS ALT1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CPNE3O75131 PRM2-201ENST00000241808 680 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
CPNE3O75131 AGRP-201ENST00000290953 764 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 30.2 ms