Protein–RNA interactions for Protein: O60494

CUBN, Cubilin, humanhuman

Predictions only

Length 3,623 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUBNO60494 LINC02062-201ENST00000513175 478 ntTSL 3 BASIC11.83□□□□□ -0.52
CUBNO60494 POLD4-206ENST00000530584 899 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
CUBNO60494 AC025154.2-202ENST00000552379 592 ntTSL 3 BASIC11.83□□□□□ -0.52
CUBNO60494 ZNF530-203ENST00000597864 634 ntTSL 2 BASIC11.83□□□□□ -0.52
CUBNO60494 AC006548.2-201ENST00000605217 529 ntBASIC11.83□□□□□ -0.52
CUBNO60494 AL139339.2-201ENST00000608063 657 ntBASIC11.83□□□□□ -0.52
CUBNO60494 MIR6816-201ENST00000620368 66 ntBASIC11.83□□□□□ -0.52
CUBNO60494 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
CUBNO60494 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
CUBNO60494 CYP4B1-202ENST00000371919 1494 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
CUBNO60494 BRAT1-201ENST00000340611 2915 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
CUBNO60494 DEK-202ENST00000397239 3427 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
CUBNO60494 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC11.82□□□□□ -0.52
CUBNO60494 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC11.82□□□□□ -0.52
CUBNO60494 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC11.82□□□□□ -0.52
CUBNO60494 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC11.82□□□□□ -0.52
CUBNO60494 VSIG10L-201ENST00000335624 3397 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
CUBNO60494 LCE2C-201ENST00000368783 614 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
CUBNO60494 SNHG14-206ENST00000450809 677 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
CUBNO60494 LRRC75A-AS1-209ENST00000481027 1016 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
CUBNO60494 AC004066.1-201ENST00000502488 802 ntBASIC11.82□□□□□ -0.52
CUBNO60494 AC106047.2-201ENST00000511723 743 ntBASIC11.82□□□□□ -0.52
CUBNO60494 PIGH-209ENST00000559581 1049 ntTSL 4 BASIC11.82□□□□□ -0.52
CUBNO60494 INCA1-203ENST00000575780 1221 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
CUBNO60494 LRRC75A-AS1-226ENST00000582911 879 ntTSL 5 BASIC11.82□□□□□ -0.52
CUBNO60494 AC022001.2-201ENST00000607849 580 ntTSL 2 BASIC11.82□□□□□ -0.52
CUBNO60494 AC011451.3-201ENST00000634951 582 ntTSL 3 BASIC11.82□□□□□ -0.52
CUBNO60494 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
CUBNO60494 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC11.82□□□□□ -0.52
CUBNO60494 LIPE-AS1-204ENST00000594624 1448 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
CUBNO60494 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
CUBNO60494 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
CUBNO60494 FECH-201ENST00000262093 3853 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
CUBNO60494 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC11.82□□□□□ -0.52
CUBNO60494 HDDC2-202ENST00000398153 918 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
CUBNO60494 NUPL2-202ENST00000410002 680 ntTSL 2 BASIC11.82□□□□□ -0.52
CUBNO60494 CCNC-217ENST00000523985 958 ntTSL 2 BASIC11.82□□□□□ -0.52
CUBNO60494 AL356756.1-201ENST00000550941 551 ntTSL 3 BASIC11.82□□□□□ -0.52
CUBNO60494 SNRPF-204ENST00000552085 815 ntTSL 3 BASIC11.82□□□□□ -0.52
CUBNO60494 LINC02176-201ENST00000569104 598 ntTSL 4 BASIC11.82□□□□□ -0.52
CUBNO60494 ANAPC11-221ENST00000584314 559 ntTSL 2 BASIC11.82□□□□□ -0.52
CUBNO60494 LINC01783-202ENST00000614408 828 ntBASIC11.82□□□□□ -0.52
CUBNO60494 BX284668.2-205ENST00000619677 828 ntBASIC11.82□□□□□ -0.52
CUBNO60494 FAM114A2-215ENST00000522858 3379 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
CUBNO60494 SCAMP1-AS1-201ENST00000421004 1479 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
CUBNO60494 AC025183.3-201ENST00000623526 1482 ntBASIC11.82□□□□□ -0.52
CUBNO60494 PCDHB8-201ENST00000239444 2740 ntAPPRIS P1 BASIC11.82□□□□□ -0.52
CUBNO60494 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
CUBNO60494 FKBP6-204ENST00000431982 1446 ntAPPRIS ALT2 TSL 2 BASIC11.82□□□□□ -0.52
CUBNO60494 FAM189A2-201ENST00000257515 2423 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
CUBNO60494 AC006504.5-208ENST00000588784 2401 ntBASIC11.82□□□□□ -0.52
CUBNO60494 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC11.82□□□□□ -0.52
CUBNO60494 REPIN1-209ENST00000479668 3182 ntTSL 2 BASIC11.82□□□□□ -0.52
CUBNO60494 MINDY4B-201ENST00000465419 1383 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
CUBNO60494 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
CUBNO60494 ZCCHC4-201ENST00000302874 2785 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
CUBNO60494 NFKB2-203ENST00000369966 3101 ntAPPRIS P4 TSL 1 (best) BASIC11.81□□□□□ -0.52
CUBNO60494 AC127383.1-201ENST00000444697 1800 ntBASIC11.81□□□□□ -0.52
CUBNO60494 FERD3L-201ENST00000275461 640 ntAPPRIS P1 BASIC11.81□□□□□ -0.52
CUBNO60494 Z69890.1-201ENST00000382990 339 ntBASIC11.81□□□□□ -0.52
CUBNO60494 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC11.81□□□□□ -0.52
CUBNO60494 AC073592.2-201ENST00000623062 780 ntBASIC11.81□□□□□ -0.52
CUBNO60494 ATP2A3-202ENST00000352011 3274 ntTSL 5 BASIC11.81□□□□□ -0.52
CUBNO60494 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
CUBNO60494 LINC02021-201ENST00000504808 1608 ntTSL 3 BASIC11.81□□□□□ -0.52
CUBNO60494 GRN-201ENST00000053867 2342 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
CUBNO60494 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
CUBNO60494 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
CUBNO60494 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
CUBNO60494 AC018629.1-201ENST00000623381 1736 ntBASIC11.81□□□□□ -0.52
CUBNO60494 LINC00334-203ENST00000638500 1377 ntTSL 5 BASIC11.81□□□□□ -0.52
CUBNO60494 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC11.81□□□□□ -0.52
CUBNO60494 FRMPD2B-201ENST00000431305 1347 ntBASIC11.81□□□□□ -0.52
CUBNO60494 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC11.81□□□□□ -0.52
CUBNO60494 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC11.81□□□□□ -0.52
CUBNO60494 SLC25A32-201ENST00000297578 2891 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
CUBNO60494 OR4S1-201ENST00000319988 930 ntAPPRIS P1 BASIC11.81□□□□□ -0.52
CUBNO60494 SNX15-201ENST00000352068 771 ntTSL 5 BASIC11.81□□□□□ -0.52
CUBNO60494 XG-202ENST00000419513 979 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
CUBNO60494 HDAC2-AS2-203ENST00000436876 591 ntTSL 5 BASIC11.81□□□□□ -0.52
CUBNO60494 SNHG15-205ENST00000580458 710 ntTSL 2 BASIC11.81□□□□□ -0.52
CUBNO60494 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC11.81□□□□□ -0.52
CUBNO60494 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
CUBNO60494 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC11.81□□□□□ -0.52
CUBNO60494 CASC2-203ENST00000435944 3270 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
CUBNO60494 NCBP2-206ENST00000447325 2216 ntTSL 2 BASIC11.81□□□□□ -0.52
CUBNO60494 MEN1-207ENST00000377326 3150 ntAPPRIS ALT1 TSL 5 BASIC11.81□□□□□ -0.52
CUBNO60494 FASTKD5-201ENST00000380266 2874 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
CUBNO60494 STAT1-203ENST00000392323 2723 ntAPPRIS ALT1 TSL 2 BASIC11.81□□□□□ -0.52
CUBNO60494 BBS1-203ENST00000455748 1552 ntTSL 2 BASIC11.81□□□□□ -0.52
CUBNO60494 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
CUBNO60494 SGCE-204ENST00000428696 1409 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
CUBNO60494 PDE8B-205ENST00000346042 3276 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
CUBNO60494 PPA2-204ENST00000354147 667 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
CUBNO60494 PPA2-205ENST00000432483 859 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
CUBNO60494 AC092638.2-201ENST00000441105 947 ntBASIC11.81□□□□□ -0.52
CUBNO60494 AL132801.1-201ENST00000559675 567 ntTSL 4 BASIC11.81□□□□□ -0.52
CUBNO60494 AL603832.2-201ENST00000566195 2125 ntBASIC11.81□□□□□ -0.52
CUBNO60494 PEBP1P2-201ENST00000603980 558 ntBASIC11.81□□□□□ -0.52
CUBNO60494 PAX4-207ENST00000611453 1235 ntTSL 5 BASIC11.81□□□□□ -0.52
Retrieved 100 of 98,524 protein–RNA pairs in 32.7 ms