Protein–RNA interactions for Protein: O00322

UPK1A, Uroplakin-1a, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1AO00322 LDLRAD4-205ENST00000585931 2118 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
UPK1AO00322 B3GNTL1-211ENST00000576599 1787 ntTSL 2 BASIC14.35□□□□□ -0.11
UPK1AO00322 VSIG10L-201ENST00000335624 3397 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
UPK1AO00322 GAS2L1-209ENST00000618518 3382 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
UPK1AO00322 ABCB9-216ENST00000542678 6051 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
UPK1AO00322 TJP2-212ENST00000636438 4689 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
UPK1AO00322 ADRB2-201ENST00000305988 3443 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
UPK1AO00322 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC14.35□□□□□ -0.11
UPK1AO00322 ARHGEF1-202ENST00000347545 3091 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
UPK1AO00322 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
UPK1AO00322 CMA1-201ENST00000206446 633 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
UPK1AO00322 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
UPK1AO00322 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
UPK1AO00322 MORN4-202ENST00000370635 419 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
UPK1AO00322 LYPLA2-201ENST00000374501 1117 ntTSL 2 BASIC14.35□□□□□ -0.11
UPK1AO00322 MIR661-201ENST00000384842 89 ntBASIC14.35□□□□□ -0.11
UPK1AO00322 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
UPK1AO00322 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
UPK1AO00322 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC14.35□□□□□ -0.11
UPK1AO00322 BCRP1-201ENST00000444246 691 ntBASIC14.35□□□□□ -0.11
UPK1AO00322 VDAC1P7-201ENST00000462417 847 ntBASIC14.35□□□□□ -0.11
UPK1AO00322 AC004066.1-201ENST00000502488 802 ntBASIC14.35□□□□□ -0.11
UPK1AO00322 FADS2-205ENST00000517839 469 ntTSL 3 BASIC14.35□□□□□ -0.11
UPK1AO00322 IL32-215ENST00000529550 772 ntAPPRIS P4 TSL 3 BASIC14.35□□□□□ -0.11
UPK1AO00322 AC055876.2-201ENST00000531834 546 ntBASIC14.35□□□□□ -0.11
UPK1AO00322 SPCS2P1-201ENST00000561636 679 ntBASIC14.35□□□□□ -0.11
UPK1AO00322 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC14.35□□□□□ -0.11
UPK1AO00322 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC14.35□□□□□ -0.11
UPK1AO00322 BRI3BPP1-201ENST00000594224 787 ntBASIC14.35□□□□□ -0.11
UPK1AO00322 AL096865.1-201ENST00000606796 927 ntBASIC14.35□□□□□ -0.11
UPK1AO00322 HIST1H2BO-201ENST00000616182 381 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
UPK1AO00322 NDUFS7-218ENST00000618074 688 ntTSL 5 BASIC14.35□□□□□ -0.11
UPK1AO00322 NDUFS7-219ENST00000620479 754 ntTSL 5 BASIC14.35□□□□□ -0.11
UPK1AO00322 TAMM41-212ENST00000630288 607 ntTSL 2 BASIC14.35□□□□□ -0.11
UPK1AO00322 PLXNC1-202ENST00000545312 1813 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
UPK1AO00322 TRAPPC11-202ENST00000357207 4435 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
UPK1AO00322 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
UPK1AO00322 VARS2-201ENST00000321897 4073 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
UPK1AO00322 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC14.35□□□□□ -0.11
UPK1AO00322 WBP4-201ENST00000379487 2623 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
UPK1AO00322 ADGRA1-203ENST00000607359 6004 ntAPPRIS ALT2 TSL 2 BASIC14.35□□□□□ -0.11
UPK1AO00322 AIPL1-207ENST00000574506 2074 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
UPK1AO00322 PTGES3-207ENST00000614328 2077 ntTSL 3 BASIC14.35□□□□□ -0.11
UPK1AO00322 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
UPK1AO00322 DNASE1L1-206ENST00000393638 2665 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
UPK1AO00322 ADAM15-202ENST00000355956 2877 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
UPK1AO00322 SFXN3-202ENST00000393459 3098 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
UPK1AO00322 PROSER3-202ENST00000396908 2149 ntAPPRIS P5 TSL 1 (best) BASIC14.35□□□□□ -0.11
UPK1AO00322 KCNT1-208ENST00000488444 3696 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
UPK1AO00322 YTHDF2-201ENST00000373812 2925 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
UPK1AO00322 ASXL1-210ENST00000613218 7038 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
UPK1AO00322 RBPMS-202ENST00000320203 3110 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
UPK1AO00322 SNX14-203ENST00000369627 3111 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
UPK1AO00322 MFN2-203ENST00000444836 4531 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
UPK1AO00322 AC007787.1-201ENST00000588095 1583 ntBASIC14.34□□□□□ -0.11
UPK1AO00322 FRMPD4-201ENST00000380682 8465 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
UPK1AO00322 PLA2G16-201ENST00000323646 2594 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
UPK1AO00322 DTX3-202ENST00000548198 3199 ntAPPRIS P3 TSL 2 BASIC14.34□□□□□ -0.11
UPK1AO00322 MARK3-205ENST00000429436 3371 ntAPPRIS ALT1 TSL 1 (best) BASIC14.34□□□□□ -0.11
UPK1AO00322 S1PR2-201ENST00000590320 3582 ntAPPRIS P1 TSL 3 BASIC14.34□□□□□ -0.11
UPK1AO00322 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
UPK1AO00322 CASC2-202ENST00000426021 3232 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
UPK1AO00322 TOMM40L-201ENST00000367987 2636 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
UPK1AO00322 STX18-AS1-207ENST00000610009 2406 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
UPK1AO00322 ORMDL3-202ENST00000394169 2230 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
UPK1AO00322 AC089987.1-201ENST00000551654 2209 ntBASIC14.34□□□□□ -0.11
UPK1AO00322 AC087521.1-201ENST00000501541 2045 ntTSL 2 BASIC14.34□□□□□ -0.11
UPK1AO00322 C5orf38-207ENST00000515640 1441 ntAPPRIS ALT2 TSL 3 BASIC14.34□□□□□ -0.11
UPK1AO00322 ZFP64-201ENST00000216923 3264 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
UPK1AO00322 RGMA-202ENST00000425933 3078 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
UPK1AO00322 EGLN1-201ENST00000366641 7097 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
UPK1AO00322 TLX1NB-202ENST00000445873 1862 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
UPK1AO00322 RBPJ-206ENST00000361572 1697 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
UPK1AO00322 DPYSL4-201ENST00000338492 2729 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
UPK1AO00322 TEAD3-202ENST00000402886 2729 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
UPK1AO00322 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
UPK1AO00322 FES-202ENST00000394300 2302 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
UPK1AO00322 TMEM209-202ENST00000462753 2322 ntAPPRIS ALT1 TSL 5 BASIC14.34□□□□□ -0.11
UPK1AO00322 B9D2-201ENST00000243578 1027 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
UPK1AO00322 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
UPK1AO00322 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC14.34□□□□□ -0.11
UPK1AO00322 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
UPK1AO00322 TRIM74-202ENST00000395244 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
UPK1AO00322 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC14.34□□□□□ -0.11
UPK1AO00322 DFFBP1-201ENST00000433250 979 ntBASIC14.34□□□□□ -0.11
UPK1AO00322 FAM207CP-201ENST00000443486 507 ntBASIC14.34□□□□□ -0.11
UPK1AO00322 TRIM73-204ENST00000447409 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
UPK1AO00322 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC14.34□□□□□ -0.11
UPK1AO00322 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
UPK1AO00322 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC14.34□□□□□ -0.11
UPK1AO00322 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
UPK1AO00322 AC091544.3-201ENST00000556424 531 ntTSL 2 BASIC14.34□□□□□ -0.11
UPK1AO00322 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC14.34□□□□□ -0.11
UPK1AO00322 INO80C-210ENST00000590757 595 ntTSL 2 BASIC14.34□□□□□ -0.11
UPK1AO00322 YIF1B-214ENST00000591784 940 ntTSL 5 BASIC14.34□□□□□ -0.11
UPK1AO00322 AC107373.2-201ENST00000607735 490 ntBASIC14.34□□□□□ -0.11
UPK1AO00322 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC14.34□□□□□ -0.11
UPK1AO00322 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
UPK1AO00322 MUTYH-210ENST00000450313 1929 ntTSL 5 BASIC14.34□□□□□ -0.11
UPK1AO00322 GRK6-211ENST00000528793 2571 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 63.5 ms