Protein–RNA interactions for Protein: A6NDR6

MEIS3P1, Putative homeobox protein Meis3-like 1, humanhuman

Predictions only

Length 274 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MEIS3P1A6NDR6 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC13.05□□□□□ -0.32
MEIS3P1A6NDR6 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
MEIS3P1A6NDR6 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC13.05□□□□□ -0.32
MEIS3P1A6NDR6 MRPL3P1-201ENST00000400109 1033 ntBASIC13.05□□□□□ -0.32
MEIS3P1A6NDR6 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
MEIS3P1A6NDR6 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC13.05□□□□□ -0.32
MEIS3P1A6NDR6 SUOX-214ENST00000551841 906 ntTSL 3 BASIC13.05□□□□□ -0.32
MEIS3P1A6NDR6 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC13.05□□□□□ -0.32
MEIS3P1A6NDR6 CMC2-214ENST00000565925 640 ntTSL 5 BASIC13.05□□□□□ -0.32
MEIS3P1A6NDR6 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC13.05□□□□□ -0.32
MEIS3P1A6NDR6 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC13.05□□□□□ -0.32
MEIS3P1A6NDR6 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC13.05□□□□□ -0.32
MEIS3P1A6NDR6 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC13.05□□□□□ -0.32
MEIS3P1A6NDR6 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC13.05□□□□□ -0.32
MEIS3P1A6NDR6 STK26-202ENST00000394334 3288 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
MEIS3P1A6NDR6 NAP1L1-202ENST00000393263 1896 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
MEIS3P1A6NDR6 PSEN2-201ENST00000366782 2465 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
MEIS3P1A6NDR6 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC13.05□□□□□ -0.32
MEIS3P1A6NDR6 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
MEIS3P1A6NDR6 NRXN1-207ENST00000404971 7578 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
MEIS3P1A6NDR6 DEK-202ENST00000397239 3427 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
MEIS3P1A6NDR6 TUBGCP6-201ENST00000248846 5612 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
MEIS3P1A6NDR6 TMEM231-207ENST00000568377 2920 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
MEIS3P1A6NDR6 RNF183-206ENST00000478815 2312 ntAPPRIS P1 BASIC13.05□□□□□ -0.32
MEIS3P1A6NDR6 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC13.05□□□□□ -0.32
MEIS3P1A6NDR6 CCDC32-201ENST00000358005 1704 ntAPPRIS P1 TSL 2 BASIC13.05□□□□□ -0.32
MEIS3P1A6NDR6 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC13.05□□□□□ -0.32
MEIS3P1A6NDR6 DBNDD1-203ENST00000392973 2689 ntTSL 2 BASIC13.05□□□□□ -0.32
MEIS3P1A6NDR6 NFE2L2-202ENST00000397063 2651 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
MEIS3P1A6NDR6 FOXP3-203ENST00000376207 2382 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
MEIS3P1A6NDR6 ARRB1-202ENST00000420843 3336 ntAPPRIS ALT1 TSL 1 (best) BASIC13.05□□□□□ -0.32
MEIS3P1A6NDR6 PLCXD2-201ENST00000393934 2063 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
MEIS3P1A6NDR6 PPP2R5E-201ENST00000337537 6659 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
MEIS3P1A6NDR6 TDP2-201ENST00000341060 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
MEIS3P1A6NDR6 LHCGR-202ENST00000401907 1477 ntTSL 5 BASIC13.04□□□□□ -0.32
MEIS3P1A6NDR6 SEMA4D-204ENST00000420101 1837 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
MEIS3P1A6NDR6 DPYSL2-204ENST00000521913 4805 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
MEIS3P1A6NDR6 OCRL-202ENST00000371113 5162 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
MEIS3P1A6NDR6 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
MEIS3P1A6NDR6 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC13.04□□□□□ -0.32
MEIS3P1A6NDR6 ORMDL3-202ENST00000394169 2230 ntAPPRIS P1 TSL 2 BASIC13.04□□□□□ -0.32
MEIS3P1A6NDR6 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC13.04□□□□□ -0.32
MEIS3P1A6NDR6 CACNA2D4-220ENST00000585732 2566 ntTSL 5 BASIC13.04□□□□□ -0.32
MEIS3P1A6NDR6 FAM155B-201ENST00000252338 4013 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
MEIS3P1A6NDR6 AC007787.1-201ENST00000588095 1583 ntBASIC13.04□□□□□ -0.32
MEIS3P1A6NDR6 AP3S2-216ENST00000617003 1561 ntBASIC13.04□□□□□ -0.32
MEIS3P1A6NDR6 PIANP-202ENST00000534837 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
MEIS3P1A6NDR6 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
MEIS3P1A6NDR6 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
MEIS3P1A6NDR6 SYS1-203ENST00000414310 795 ntTSL 3 BASIC13.04□□□□□ -0.32
MEIS3P1A6NDR6 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC13.04□□□□□ -0.32
MEIS3P1A6NDR6 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC13.04□□□□□ -0.32
MEIS3P1A6NDR6 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC13.04□□□□□ -0.32
MEIS3P1A6NDR6 PPIE-208ENST00000470213 927 ntTSL 3 BASIC13.04□□□□□ -0.32
MEIS3P1A6NDR6 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC13.04□□□□□ -0.32
MEIS3P1A6NDR6 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
MEIS3P1A6NDR6 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC13.04□□□□□ -0.32
MEIS3P1A6NDR6 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC13.04□□□□□ -0.32
MEIS3P1A6NDR6 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC13.04□□□□□ -0.32
MEIS3P1A6NDR6 CD63-204ENST00000546939 779 ntTSL 3 BASIC13.04□□□□□ -0.32
MEIS3P1A6NDR6 RNF34-208ENST00000555076 593 ntTSL 3 BASIC13.04□□□□□ -0.32
MEIS3P1A6NDR6 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
MEIS3P1A6NDR6 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC13.04□□□□□ -0.32
MEIS3P1A6NDR6 AP001005.1-201ENST00000571755 1248 ntBASIC13.04□□□□□ -0.32
MEIS3P1A6NDR6 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC13.04□□□□□ -0.32
MEIS3P1A6NDR6 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC13.04□□□□□ -0.32
MEIS3P1A6NDR6 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
MEIS3P1A6NDR6 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC13.04□□□□□ -0.32
MEIS3P1A6NDR6 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
MEIS3P1A6NDR6 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
MEIS3P1A6NDR6 AC092865.6-201ENST00000642101 219 ntBASIC13.04□□□□□ -0.32
MEIS3P1A6NDR6 HIST3H2BB-201ENST00000620438 2364 ntAPPRIS P1 BASIC13.04□□□□□ -0.32
MEIS3P1A6NDR6 HOXA3-201ENST00000317201 2761 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
MEIS3P1A6NDR6 MSTO1-201ENST00000245564 2431 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
MEIS3P1A6NDR6 BRPF1-205ENST00000433861 4304 ntTSL 2 BASIC13.04□□□□□ -0.32
MEIS3P1A6NDR6 R3HDM2-204ENST00000402412 4372 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
MEIS3P1A6NDR6 EFR3B-202ENST00000401432 5162 ntTSL 2 BASIC13.04□□□□□ -0.32
MEIS3P1A6NDR6 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC13.04□□□□□ -0.32
MEIS3P1A6NDR6 USP33-202ENST00000370792 2917 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
MEIS3P1A6NDR6 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
MEIS3P1A6NDR6 ZNF202-206ENST00000529691 3384 ntAPPRIS P1 TSL 2 BASIC13.04□□□□□ -0.32
MEIS3P1A6NDR6 MAPT-IT1-201ENST00000624111 3016 ntBASIC13.04□□□□□ -0.32
MEIS3P1A6NDR6 MED15-203ENST00000382974 2235 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
MEIS3P1A6NDR6 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
MEIS3P1A6NDR6 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC13.04□□□□□ -0.32
MEIS3P1A6NDR6 CALML3-201ENST00000315238 2763 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
MEIS3P1A6NDR6 POLL-205ENST00000370169 2360 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
MEIS3P1A6NDR6 SMG9-211ENST00000601170 2387 ntTSL 2 BASIC13.03□□□□□ -0.32
MEIS3P1A6NDR6 SIGLECL1-208ENST00000614422 1516 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
MEIS3P1A6NDR6 SMG8-201ENST00000300917 3263 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
MEIS3P1A6NDR6 ARPC4-TTLL3-201ENST00000397256 2466 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
MEIS3P1A6NDR6 RAP1GAP-211ENST00000495204 2489 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
MEIS3P1A6NDR6 DNM2-204ENST00000408974 3013 ntAPPRIS ALT1 TSL 2 BASIC13.03□□□□□ -0.32
MEIS3P1A6NDR6 ASH2L-201ENST00000343823 3090 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
MEIS3P1A6NDR6 EDEM3-201ENST00000318130 6898 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
MEIS3P1A6NDR6 AC022028.2-201ENST00000474115 2619 ntTSL 2 BASIC13.03□□□□□ -0.32
MEIS3P1A6NDR6 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
MEIS3P1A6NDR6 REV1-202ENST00000393445 4686 ntAPPRIS ALT1 TSL 1 (best) BASIC13.03□□□□□ -0.32
MEIS3P1A6NDR6 TET3-201ENST00000305799 5174 ntTSL 5 BASIC13.03□□□□□ -0.32
MEIS3P1A6NDR6 EXO5-201ENST00000296380 2217 ntAPPRIS P1 TSL 2 BASIC13.03□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 33.8 ms