Protein–RNA interactions for Protein: Q9Y5G4

PCDHGA9, Protocadherin gamma-A9, humanhuman

Known RBP Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA9Q9Y5G4 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC14.21□□□□□ -0.13
PCDHGA9Q9Y5G4 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
PCDHGA9Q9Y5G4 CC2D1B-202ENST00000371586 5642 ntAPPRIS P3 TSL 5 BASIC14.21□□□□□ -0.13
PCDHGA9Q9Y5G4 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
PCDHGA9Q9Y5G4 FANCA-213ENST00000563673 1694 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
PCDHGA9Q9Y5G4 LRRFIP1P1-201ENST00000498774 2246 ntBASIC14.21□□□□□ -0.13
PCDHGA9Q9Y5G4 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
PCDHGA9Q9Y5G4 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC14.21□□□□□ -0.13
PCDHGA9Q9Y5G4 HMGA2-210ENST00000541363 8094 ntAPPRIS ALT1 TSL 1 (best) BASIC14.21□□□□□ -0.13
PCDHGA9Q9Y5G4 BRAT1-201ENST00000340611 2915 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
PCDHGA9Q9Y5G4 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
PCDHGA9Q9Y5G4 CMA1-202ENST00000250378 937 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
PCDHGA9Q9Y5G4 CSH2-201ENST00000336844 1173 ntTSL 2 BASIC14.21□□□□□ -0.13
PCDHGA9Q9Y5G4 IP6K2-202ENST00000340879 1185 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
PCDHGA9Q9Y5G4 CSH2-202ENST00000345366 598 ntTSL 5 BASIC14.21□□□□□ -0.13
PCDHGA9Q9Y5G4 AL355483.2-201ENST00000421637 675 ntTSL 3 BASIC14.21□□□□□ -0.13
PCDHGA9Q9Y5G4 AC099552.1-201ENST00000431083 744 ntTSL 5 BASIC14.21□□□□□ -0.13
PCDHGA9Q9Y5G4 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC14.21□□□□□ -0.13
PCDHGA9Q9Y5G4 AL450003.2-201ENST00000450445 428 ntTSL 5 BASIC14.21□□□□□ -0.13
PCDHGA9Q9Y5G4 IGHJ2P-201ENST00000454480 60 ntBASIC14.21□□□□□ -0.13
PCDHGA9Q9Y5G4 AAMDC-206ENST00000526415 579 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
PCDHGA9Q9Y5G4 EHF-205ENST00000527935 557 ntTSL 2 BASIC14.21□□□□□ -0.13
PCDHGA9Q9Y5G4 IL32-218ENST00000530890 774 ntAPPRIS ALT2 TSL 2 BASIC14.21□□□□□ -0.13
PCDHGA9Q9Y5G4 IGHV3OR16-9-202ENST00000558425 288 ntAPPRIS ALT2 BASIC14.21□□□□□ -0.13
PCDHGA9Q9Y5G4 COG4-212ENST00000564653 590 ntTSL 5 BASIC14.21□□□□□ -0.13
PCDHGA9Q9Y5G4 AC011447.3-204ENST00000585498 883 ntTSL 2 BASIC14.21□□□□□ -0.13
PCDHGA9Q9Y5G4 UBL5-208ENST00000593087 320 ntTSL 3 BASIC14.21□□□□□ -0.13
PCDHGA9Q9Y5G4 AC020914.3-201ENST00000594712 304 ntBASIC14.21□□□□□ -0.13
PCDHGA9Q9Y5G4 DIO1-215ENST00000610607 796 ntTSL 5 BASIC14.21□□□□□ -0.13
PCDHGA9Q9Y5G4 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
PCDHGA9Q9Y5G4 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
PCDHGA9Q9Y5G4 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC14.21□□□□□ -0.13
PCDHGA9Q9Y5G4 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC14.21□□□□□ -0.13
PCDHGA9Q9Y5G4 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
PCDHGA9Q9Y5G4 SPHK2-210ENST00000599748 2683 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
PCDHGA9Q9Y5G4 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
PCDHGA9Q9Y5G4 TPBG-201ENST00000369750 6484 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
PCDHGA9Q9Y5G4 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC14.21□□□□□ -0.14
PCDHGA9Q9Y5G4 FRMPD4-201ENST00000380682 8465 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.14
PCDHGA9Q9Y5G4 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.14
PCDHGA9Q9Y5G4 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
PCDHGA9Q9Y5G4 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.14
PCDHGA9Q9Y5G4 PSMC3-209ENST00000530912 1390 ntTSL 5 BASIC14.21□□□□□ -0.14
PCDHGA9Q9Y5G4 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
PCDHGA9Q9Y5G4 CICP24-201ENST00000605464 2705 ntBASIC14.21□□□□□ -0.14
PCDHGA9Q9Y5G4 SNRPN-202ENST00000390687 1528 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
PCDHGA9Q9Y5G4 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC14.2□□□□□ -0.14
PCDHGA9Q9Y5G4 PCED1B-202ENST00000546455 2328 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
PCDHGA9Q9Y5G4 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC14.2□□□□□ -0.14
PCDHGA9Q9Y5G4 ERRFI1-201ENST00000377482 3104 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
PCDHGA9Q9Y5G4 ABHD18-206ENST00000611882 1493 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
PCDHGA9Q9Y5G4 KRBOX4-202ENST00000344302 2774 ntAPPRIS ALT2 TSL 2 BASIC14.2□□□□□ -0.14
PCDHGA9Q9Y5G4 GSPT1-202ENST00000434724 7105 ntAPPRIS P4 TSL 1 (best) BASIC14.2□□□□□ -0.14
PCDHGA9Q9Y5G4 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
PCDHGA9Q9Y5G4 ARRB2-204ENST00000412477 1779 ntTSL 2 BASIC14.2□□□□□ -0.14
PCDHGA9Q9Y5G4 NISCH-202ENST00000420808 2589 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
PCDHGA9Q9Y5G4 PAM-206ENST00000438793 5432 ntAPPRIS ALT1 TSL 1 (best) BASIC14.2□□□□□ -0.14
PCDHGA9Q9Y5G4 B9D1-201ENST00000261499 908 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
PCDHGA9Q9Y5G4 PFDN6-202ENST00000374607 598 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
PCDHGA9Q9Y5G4 PFDN6-203ENST00000374610 521 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
PCDHGA9Q9Y5G4 TMEM52-203ENST00000378602 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
PCDHGA9Q9Y5G4 NDUFC1-201ENST00000394223 598 ntAPPRIS P1 TSL 3 BASIC14.2□□□□□ -0.14
PCDHGA9Q9Y5G4 B9D1-203ENST00000395615 805 ntTSL 3 BASIC14.2□□□□□ -0.14
PCDHGA9Q9Y5G4 MPV17-205ENST00000402310 906 ntTSL 5 BASIC14.2□□□□□ -0.14
PCDHGA9Q9Y5G4 PSTK-202ENST00000405485 1047 ntAPPRIS P2 TSL 2 BASIC14.2□□□□□ -0.14
PCDHGA9Q9Y5G4 KLF2P2-201ENST00000416807 1039 ntBASIC14.2□□□□□ -0.14
PCDHGA9Q9Y5G4 AP000350.4-201ENST00000433835 788 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
PCDHGA9Q9Y5G4 BX284668.4-201ENST00000453917 508 ntBASIC14.2□□□□□ -0.14
PCDHGA9Q9Y5G4 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC14.2□□□□□ -0.14
PCDHGA9Q9Y5G4 MDH2-205ENST00000461263 648 ntTSL 2 BASIC14.2□□□□□ -0.14
PCDHGA9Q9Y5G4 RNA5SP423-201ENST00000517127 109 ntBASIC14.2□□□□□ -0.14
PCDHGA9Q9Y5G4 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
PCDHGA9Q9Y5G4 CYGB-203ENST00000589145 788 ntTSL 3 BASIC14.2□□□□□ -0.14
PCDHGA9Q9Y5G4 ANGPTL8-203ENST00000591200 504 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
PCDHGA9Q9Y5G4 OCEL1-213ENST00000601529 942 ntTSL 3 BASIC14.2□□□□□ -0.14
PCDHGA9Q9Y5G4 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC14.2□□□□□ -0.14
PCDHGA9Q9Y5G4 RETN-203ENST00000629642 400 ntTSL 5 BASIC14.2□□□□□ -0.14
PCDHGA9Q9Y5G4 PLXNC1-201ENST00000258526 7346 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
PCDHGA9Q9Y5G4 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
PCDHGA9Q9Y5G4 NFATC1-218ENST00000592223 2531 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
PCDHGA9Q9Y5G4 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
PCDHGA9Q9Y5G4 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
PCDHGA9Q9Y5G4 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
PCDHGA9Q9Y5G4 RSPH6A-202ENST00000597055 2306 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
PCDHGA9Q9Y5G4 DAAM2-211ENST00000633794 3871 ntTSL 5 BASIC14.2□□□□□ -0.14
PCDHGA9Q9Y5G4 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC14.2□□□□□ -0.14
PCDHGA9Q9Y5G4 AC018892.3-201ENST00000623986 2499 ntBASIC14.2□□□□□ -0.14
PCDHGA9Q9Y5G4 ISCA2-204ENST00000556816 2626 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
PCDHGA9Q9Y5G4 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC14.2□□□□□ -0.14
PCDHGA9Q9Y5G4 AC138035.3-201ENST00000622706 2791 ntBASIC14.2□□□□□ -0.14
PCDHGA9Q9Y5G4 CCAR2-202ENST00000389279 3980 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
PCDHGA9Q9Y5G4 MAPK14-204ENST00000468133 1376 ntTSL 2 BASIC14.2□□□□□ -0.14
PCDHGA9Q9Y5G4 MAX-205ENST00000358664 1546 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
PCDHGA9Q9Y5G4 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC14.2□□□□□ -0.14
PCDHGA9Q9Y5G4 CPEB1-211ENST00000615198 2112 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
PCDHGA9Q9Y5G4 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
PCDHGA9Q9Y5G4 RASA1-201ENST00000274376 3752 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
PCDHGA9Q9Y5G4 MAPK7-202ENST00000308406 3149 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
PCDHGA9Q9Y5G4 CCDC183-AS1-201ENST00000414656 2386 ntTSL 2 BASIC14.19□□□□□ -0.14
PCDHGA9Q9Y5G4 MEGF10-202ENST00000418761 2238 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 84.5 ms