Protein–RNA interactions for Protein: Q9UBN7

HDAC6, Histone deacetylase 6, humanhuman

Predictions only

Length 1,215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6Q9UBN7 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC17.14■□□□□ 0.33
HDAC6Q9UBN7 AC084859.1-201ENST00000533002 670 ntTSL 4 BASIC17.14■□□□□ 0.33
HDAC6Q9UBN7 ANAPC15-214ENST00000543587 883 ntAPPRIS ALT1 TSL 1 (best) BASIC17.14■□□□□ 0.33
HDAC6Q9UBN7 IGHV3OR16-16-201ENST00000563644 343 ntBASIC17.14■□□□□ 0.33
HDAC6Q9UBN7 AL139099.5-201ENST00000635274 300 ntBASIC17.14■□□□□ 0.33
HDAC6Q9UBN7 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC17.14■□□□□ 0.33
HDAC6Q9UBN7 NRP2-203ENST00000357785 2926 ntAPPRIS P4 TSL 1 (best) BASIC17.14■□□□□ 0.33
HDAC6Q9UBN7 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
HDAC6Q9UBN7 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
HDAC6Q9UBN7 SH2D3C-206ENST00000429553 2794 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
HDAC6Q9UBN7 PMP22-209ENST00000612492 1822 ntAPPRIS P1 TSL 3 BASIC17.14■□□□□ 0.33
HDAC6Q9UBN7 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
HDAC6Q9UBN7 TGFBR2-202ENST00000359013 4605 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
HDAC6Q9UBN7 ADAM15-204ENST00000359280 2874 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
HDAC6Q9UBN7 PSMC3-209ENST00000530912 1390 ntTSL 5 BASIC17.14■□□□□ 0.33
HDAC6Q9UBN7 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
HDAC6Q9UBN7 SLC24A3-201ENST00000328041 3929 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
HDAC6Q9UBN7 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC17.14■□□□□ 0.33
HDAC6Q9UBN7 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC17.13■□□□□ 0.33
HDAC6Q9UBN7 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC17.13■□□□□ 0.33
HDAC6Q9UBN7 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
HDAC6Q9UBN7 RGS6-218ENST00000556437 1689 ntAPPRIS ALT1 TSL 1 (best) BASIC17.13■□□□□ 0.33
HDAC6Q9UBN7 SNAP47-203ENST00000366760 1446 ntAPPRIS ALT2 TSL 2 BASIC17.13■□□□□ 0.33
HDAC6Q9UBN7 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
HDAC6Q9UBN7 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
HDAC6Q9UBN7 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC17.13■□□□□ 0.33
HDAC6Q9UBN7 LEF1-216ENST00000510624 1472 ntTSL 2 BASIC17.13■□□□□ 0.33
HDAC6Q9UBN7 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
HDAC6Q9UBN7 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
HDAC6Q9UBN7 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
HDAC6Q9UBN7 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
HDAC6Q9UBN7 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
HDAC6Q9UBN7 TEAD3-201ENST00000338863 2983 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
HDAC6Q9UBN7 PPP1R14B-202ENST00000392210 600 ntTSL 3 BASIC17.13■□□□□ 0.33
HDAC6Q9UBN7 RBAK-RBAKDN-201ENST00000396904 766 ntAPPRIS P2 TSL 4 BASIC17.13■□□□□ 0.33
HDAC6Q9UBN7 ACTBP8-201ENST00000403258 1108 ntBASIC17.13■□□□□ 0.33
HDAC6Q9UBN7 RBAK-RBAKDN-202ENST00000407184 1001 ntAPPRIS ALT2 TSL 2 BASIC17.13■□□□□ 0.33
HDAC6Q9UBN7 FDPS-203ENST00000447866 1256 ntAPPRIS ALT1 TSL 5 BASIC17.13■□□□□ 0.33
HDAC6Q9UBN7 Z93015.1-201ENST00000451718 390 ntBASIC17.13■□□□□ 0.33
HDAC6Q9UBN7 AC018685.1-201ENST00000457813 368 ntTSL 3 BASIC17.13■□□□□ 0.33
HDAC6Q9UBN7 HYAL3-206ENST00000513170 636 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
HDAC6Q9UBN7 TSR1-204ENST00000576112 1290 ntTSL 5 BASIC17.13■□□□□ 0.33
HDAC6Q9UBN7 KLK3-211ENST00000597483 810 ntTSL 2 BASIC17.13■□□□□ 0.33
HDAC6Q9UBN7 PRKN-211ENST00000615065 261 ntTSL 5 BASIC17.13■□□□□ 0.33
HDAC6Q9UBN7 AC006453.4-201ENST00000636949 1252 ntBASIC17.13■□□□□ 0.33
HDAC6Q9UBN7 MALSU1-202ENST00000466681 3044 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
HDAC6Q9UBN7 CYB561D1-204ENST00000420578 3326 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
HDAC6Q9UBN7 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
HDAC6Q9UBN7 DYM-201ENST00000269445 5049 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
HDAC6Q9UBN7 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC17.13■□□□□ 0.33
HDAC6Q9UBN7 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC17.13■□□□□ 0.33
HDAC6Q9UBN7 SFI1-209ENST00000443011 3579 ntTSL 5 BASIC17.13■□□□□ 0.33
HDAC6Q9UBN7 ST7L-207ENST00000369669 1743 ntTSL 2 BASIC17.13■□□□□ 0.33
HDAC6Q9UBN7 OVCH1-AS1-204ENST00000641955 5529 ntBASIC17.13■□□□□ 0.33
HDAC6Q9UBN7 ELF2-202ENST00000379549 3005 ntTSL 2 BASIC17.13■□□□□ 0.33
HDAC6Q9UBN7 ZBTB32-202ENST00000392197 2068 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
HDAC6Q9UBN7 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
HDAC6Q9UBN7 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
HDAC6Q9UBN7 AC148477.4-201ENST00000613430 1793 ntBASIC17.12■□□□□ 0.33
HDAC6Q9UBN7 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
HDAC6Q9UBN7 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
HDAC6Q9UBN7 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
HDAC6Q9UBN7 DMAC2-204ENST00000438807 1454 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
HDAC6Q9UBN7 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
HDAC6Q9UBN7 ATP5F1-202ENST00000369722 3156 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
HDAC6Q9UBN7 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
HDAC6Q9UBN7 COCH-202ENST00000396618 2536 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
HDAC6Q9UBN7 CDC42EP4-202ENST00000439510 2879 ntTSL 2 BASIC17.12■□□□□ 0.33
HDAC6Q9UBN7 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC17.12■□□□□ 0.33
HDAC6Q9UBN7 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
HDAC6Q9UBN7 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
HDAC6Q9UBN7 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
HDAC6Q9UBN7 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
HDAC6Q9UBN7 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC17.12■□□□□ 0.33
HDAC6Q9UBN7 FXN-201ENST00000377270 2608 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
HDAC6Q9UBN7 TRAF7-201ENST00000326181 3700 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
HDAC6Q9UBN7 HPGD-202ENST00000296522 3027 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
HDAC6Q9UBN7 SEPT9-208ENST00000541152 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
HDAC6Q9UBN7 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
HDAC6Q9UBN7 C1orf123-201ENST00000294360 1085 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
HDAC6Q9UBN7 C3orf22-201ENST00000318225 1000 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
HDAC6Q9UBN7 PRDX5-203ENST00000352435 596 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
HDAC6Q9UBN7 IGLV4-69-201ENST00000390282 419 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
HDAC6Q9UBN7 AL355483.2-201ENST00000421637 675 ntTSL 3 BASIC17.12■□□□□ 0.33
HDAC6Q9UBN7 AC128709.1-201ENST00000445908 600 ntTSL 3 BASIC17.12■□□□□ 0.33
HDAC6Q9UBN7 AC114812.1-204ENST00000449669 728 ntBASIC17.12■□□□□ 0.33
HDAC6Q9UBN7 AC104306.2-201ENST00000451877 341 ntBASIC17.12■□□□□ 0.33
HDAC6Q9UBN7 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC17.12■□□□□ 0.33
HDAC6Q9UBN7 XXYLT1-AS1-201ENST00000458531 431 ntTSL 3 BASIC17.12■□□□□ 0.33
HDAC6Q9UBN7 KRT8P13-201ENST00000463294 1010 ntBASIC17.12■□□□□ 0.33
HDAC6Q9UBN7 CHIA-209ENST00000483391 1188 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
HDAC6Q9UBN7 TPI1-206ENST00000488464 791 ntTSL 5 BASIC17.12■□□□□ 0.33
HDAC6Q9UBN7 ACR-203ENST00000529621 708 ntTSL 5 BASIC17.12■□□□□ 0.33
HDAC6Q9UBN7 DIO3OS-203ENST00000554441 1068 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
HDAC6Q9UBN7 AL121944.1-201ENST00000605945 686 ntTSL 2 BASIC17.12■□□□□ 0.33
HDAC6Q9UBN7 AL022328.3-201ENST00000607943 679 ntBASIC17.12■□□□□ 0.33
HDAC6Q9UBN7 FDPS-221ENST00000612683 1198 ntAPPRIS ALT1 TSL 5 BASIC17.12■□□□□ 0.33
HDAC6Q9UBN7 AC007686.3-201ENST00000619017 3487 ntBASIC17.12■□□□□ 0.33
HDAC6Q9UBN7 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
HDAC6Q9UBN7 TNFSF13-202ENST00000349228 2036 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 34.2 ms