Protein–RNA interactions for Protein: Q9NWF4

SLC52A1, Solute carrier family 52, riboflavin transporter, member 1, humanhuman

Predictions only

Length 448 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC52A1Q9NWF4 FXYD2-205ENST00000528014 672 ntAPPRIS P1 TSL 3 BASIC21.22■□□□□ 0.99
SLC52A1Q9NWF4 ZNF124-206ENST00000543802 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
SLC52A1Q9NWF4 LINC01481-204ENST00000550216 494 ntTSL 2 BASIC21.22■□□□□ 0.99
SLC52A1Q9NWF4 CRTC3-AS1-202ENST00000559531 657 ntTSL 3 BASIC21.22■□□□□ 0.99
SLC52A1Q9NWF4 UPF3AP2-202ENST00000578315 730 ntTSL 5 BASIC21.22■□□□□ 0.99
SLC52A1Q9NWF4 AL022334.2-201ENST00000610000 484 ntBASIC21.22■□□□□ 0.99
SLC52A1Q9NWF4 HIST1H2BE-201ENST00000614097 497 ntAPPRIS P1 BASIC21.22■□□□□ 0.99
SLC52A1Q9NWF4 ZNF619-201ENST00000314686 2233 ntTSL 2 BASIC21.22■□□□□ 0.99
SLC52A1Q9NWF4 AC126365.1-201ENST00000578585 1514 ntBASIC21.22■□□□□ 0.99
SLC52A1Q9NWF4 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC21.22■□□□□ 0.99
SLC52A1Q9NWF4 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC21.22■□□□□ 0.99
SLC52A1Q9NWF4 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC21.22■□□□□ 0.99
SLC52A1Q9NWF4 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC21.22■□□□□ 0.99
SLC52A1Q9NWF4 ZNF581-203ENST00000587252 1324 ntAPPRIS P1 TSL 2 BASIC21.22■□□□□ 0.99
SLC52A1Q9NWF4 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
SLC52A1Q9NWF4 MIR22HG-201ENST00000334146 1383 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
SLC52A1Q9NWF4 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
SLC52A1Q9NWF4 WASH3P-207ENST00000560956 1394 ntBASIC21.22■□□□□ 0.99
SLC52A1Q9NWF4 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC21.21■□□□□ 0.99
SLC52A1Q9NWF4 PTGES3L-AARSD1-202ENST00000409103 1670 ntTSL 5 BASIC21.21■□□□□ 0.99
SLC52A1Q9NWF4 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
SLC52A1Q9NWF4 NOX5-209ENST00000530406 2289 ntAPPRIS P4 TSL 1 (best) BASIC21.21■□□□□ 0.99
SLC52A1Q9NWF4 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
SLC52A1Q9NWF4 SMPDL3B-201ENST00000373888 1548 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
SLC52A1Q9NWF4 HIST2H2BA-201ENST00000412169 381 ntBASIC21.21■□□□□ 0.99
SLC52A1Q9NWF4 AL009181.1-201ENST00000418471 1085 ntTSL 5 BASIC21.21■□□□□ 0.99
SLC52A1Q9NWF4 DUX4L50-201ENST00000455245 715 ntBASIC21.21■□□□□ 0.99
SLC52A1Q9NWF4 AC108199.1-201ENST00000504249 508 ntTSL 3 BASIC21.21■□□□□ 0.99
SLC52A1Q9NWF4 AP000911.2-201ENST00000534330 502 ntBASIC21.21■□□□□ 0.99
SLC52A1Q9NWF4 SDHAF2-206ENST00000542074 835 ntTSL 2 BASIC21.21■□□□□ 0.99
SLC52A1Q9NWF4 MESP2-203ENST00000560219 859 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
SLC52A1Q9NWF4 AC129507.4-201ENST00000570501 411 ntTSL 2 BASIC21.21■□□□□ 0.99
SLC52A1Q9NWF4 AC127024.7-201ENST00000625101 200 ntBASIC21.21■□□□□ 0.99
SLC52A1Q9NWF4 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
SLC52A1Q9NWF4 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
SLC52A1Q9NWF4 C12orf76-207ENST00000549724 1302 ntTSL 5 BASIC21.21■□□□□ 0.99
SLC52A1Q9NWF4 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
SLC52A1Q9NWF4 PDRG1-201ENST00000202017 1998 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
SLC52A1Q9NWF4 KRT8P28-201ENST00000433288 1390 ntBASIC21.21■□□□□ 0.99
SLC52A1Q9NWF4 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
SLC52A1Q9NWF4 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
SLC52A1Q9NWF4 RASGEF1B-202ENST00000335927 1756 ntTSL 1 (best) BASIC21.2■□□□□ 0.99
SLC52A1Q9NWF4 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.99
SLC52A1Q9NWF4 RPL13-204ENST00000452368 1455 ntTSL 2 BASIC21.2■□□□□ 0.98
SLC52A1Q9NWF4 WAC-202ENST00000347934 2839 ntTSL 5 BASIC21.2■□□□□ 0.98
SLC52A1Q9NWF4 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC21.2■□□□□ 0.98
SLC52A1Q9NWF4 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
SLC52A1Q9NWF4 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
SLC52A1Q9NWF4 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC21.2■□□□□ 0.98
SLC52A1Q9NWF4 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
SLC52A1Q9NWF4 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
SLC52A1Q9NWF4 CMTM5-201ENST00000339180 1173 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
SLC52A1Q9NWF4 Z69890.1-201ENST00000382990 339 ntBASIC21.2■□□□□ 0.98
SLC52A1Q9NWF4 NPPC-202ENST00000409852 1051 ntAPPRIS P1 TSL 3 BASIC21.2■□□□□ 0.98
SLC52A1Q9NWF4 AC005392.1-201ENST00000419624 500 ntTSL 5 BASIC21.2■□□□□ 0.98
SLC52A1Q9NWF4 HIST1H4I-201ENST00000615353 1294 ntAPPRIS P1 BASIC21.2■□□□□ 0.98
SLC52A1Q9NWF4 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC21.2■□□□□ 0.98
SLC52A1Q9NWF4 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC21.2■□□□□ 0.98
SLC52A1Q9NWF4 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
SLC52A1Q9NWF4 MARK2P16-201ENST00000605714 1723 ntBASIC21.2■□□□□ 0.98
SLC52A1Q9NWF4 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
SLC52A1Q9NWF4 BID-213ENST00000615414 2236 ntTSL 5 BASIC21.2■□□□□ 0.98
SLC52A1Q9NWF4 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC21.2■□□□□ 0.98
SLC52A1Q9NWF4 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
SLC52A1Q9NWF4 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
SLC52A1Q9NWF4 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
SLC52A1Q9NWF4 AC112693.3-201ENST00000624819 1983 ntBASIC21.19■□□□□ 0.98
SLC52A1Q9NWF4 R3HDM2P2-201ENST00000401880 2116 ntBASIC21.19■□□□□ 0.98
SLC52A1Q9NWF4 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
SLC52A1Q9NWF4 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
SLC52A1Q9NWF4 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
SLC52A1Q9NWF4 FGF7P3-202ENST00000640245 1707 ntTSL 4 BASIC21.19■□□□□ 0.98
SLC52A1Q9NWF4 FERD3L-201ENST00000275461 640 ntAPPRIS P1 BASIC21.19■□□□□ 0.98
SLC52A1Q9NWF4 C1QA-202ENST00000402322 976 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
SLC52A1Q9NWF4 AL157788.1-201ENST00000437838 229 ntTSL 3 BASIC21.19■□□□□ 0.98
SLC52A1Q9NWF4 AL157792.1-201ENST00000488281 530 ntBASIC21.19■□□□□ 0.98
SLC52A1Q9NWF4 LINC02176-201ENST00000569104 598 ntTSL 4 BASIC21.19■□□□□ 0.98
SLC52A1Q9NWF4 NUDT4P2-201ENST00000578341 546 ntBASIC21.19■□□□□ 0.98
SLC52A1Q9NWF4 PGPEP1-206ENST00000597431 545 ntTSL 5 BASIC21.19■□□□□ 0.98
SLC52A1Q9NWF4 RPS10-207ENST00000621356 784 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
SLC52A1Q9NWF4 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC21.19■□□□□ 0.98
SLC52A1Q9NWF4 YWHAE-208ENST00000571732 1818 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
SLC52A1Q9NWF4 MRPL37P1-201ENST00000592451 1337 ntBASIC21.19■□□□□ 0.98
SLC52A1Q9NWF4 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
SLC52A1Q9NWF4 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC21.19■□□□□ 0.98
SLC52A1Q9NWF4 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC21.19■□□□□ 0.98
SLC52A1Q9NWF4 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
SLC52A1Q9NWF4 LINC01815-202ENST00000641468 1409 ntBASIC21.19■□□□□ 0.98
SLC52A1Q9NWF4 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
SLC52A1Q9NWF4 AL365203.3-201ENST00000609742 2057 ntBASIC21.19■□□□□ 0.98
SLC52A1Q9NWF4 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
SLC52A1Q9NWF4 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
SLC52A1Q9NWF4 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
SLC52A1Q9NWF4 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC21.18■□□□□ 0.98
SLC52A1Q9NWF4 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
SLC52A1Q9NWF4 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
SLC52A1Q9NWF4 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
SLC52A1Q9NWF4 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
SLC52A1Q9NWF4 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
SLC52A1Q9NWF4 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 57.5 ms