Protein–RNA interactions for Protein: Q9BWW4

SSBP3, Single-stranded DNA-binding protein 3, humanhuman

Predicted RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3Q9BWW4 MVK-207ENST00000539575 2747 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
SSBP3Q9BWW4 NMNAT3-201ENST00000296202 1569 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
SSBP3Q9BWW4 AL928970.1-201ENST00000422679 2923 ntTSL 5 BASIC12.69□□□□□ -0.38
SSBP3Q9BWW4 POU5F1B-201ENST00000465342 5360 ntAPPRIS P1 TSL 3 BASIC12.69□□□□□ -0.38
SSBP3Q9BWW4 XPO6-201ENST00000304658 4422 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
SSBP3Q9BWW4 TBK1-201ENST00000331710 3256 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
SSBP3Q9BWW4 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
SSBP3Q9BWW4 DDX1-202ENST00000381341 2817 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
SSBP3Q9BWW4 JAKMIP1-204ENST00000409831 2371 ntAPPRIS P1 TSL 2 BASIC12.69□□□□□ -0.38
SSBP3Q9BWW4 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
SSBP3Q9BWW4 TPM1-206ENST00000358278 1717 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
SSBP3Q9BWW4 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC12.69□□□□□ -0.38
SSBP3Q9BWW4 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
SSBP3Q9BWW4 PDE6D-201ENST00000287600 1175 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
SSBP3Q9BWW4 RPL39L-201ENST00000296277 756 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
SSBP3Q9BWW4 GUK1-206ENST00000366723 845 ntTSL 5 BASIC12.69□□□□□ -0.38
SSBP3Q9BWW4 GNG5-201ENST00000370641 920 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
SSBP3Q9BWW4 AL139094.1-201ENST00000405549 1188 ntBASIC12.69□□□□□ -0.38
SSBP3Q9BWW4 ZFAND2B-203ENST00000409206 1159 ntTSL 2 BASIC12.69□□□□□ -0.38
SSBP3Q9BWW4 AL645941.1-201ENST00000415875 338 ntTSL 3 BASIC12.69□□□□□ -0.38
SSBP3Q9BWW4 AL121983.1-201ENST00000424181 335 ntTSL 2 BASIC12.69□□□□□ -0.38
SSBP3Q9BWW4 TMEM107-204ENST00000437139 747 ntAPPRIS ALT1 TSL 1 (best) BASIC12.69□□□□□ -0.38
SSBP3Q9BWW4 CR589904.1-201ENST00000437830 732 ntTSL 5 BASIC12.69□□□□□ -0.38
SSBP3Q9BWW4 SEPT7P9-202ENST00000489259 743 ntTSL 3 BASIC12.69□□□□□ -0.38
SSBP3Q9BWW4 RNF216P1-213ENST00000494947 946 ntTSL 2 BASIC12.69□□□□□ -0.38
SSBP3Q9BWW4 HOXC-AS3-201ENST00000509870 544 ntTSL 4 BASIC12.69□□□□□ -0.38
SSBP3Q9BWW4 RMDN1-212ENST00000519966 1164 ntTSL 2 BASIC12.69□□□□□ -0.38
SSBP3Q9BWW4 RPL8-205ENST00000527914 551 ntTSL 3 BASIC12.69□□□□□ -0.38
SSBP3Q9BWW4 TSPAN11-204ENST00000546076 1058 ntAPPRIS P1 TSL 2 BASIC12.69□□□□□ -0.38
SSBP3Q9BWW4 AC079316.1-201ENST00000548397 411 ntBASIC12.69□□□□□ -0.38
SSBP3Q9BWW4 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC12.69□□□□□ -0.38
SSBP3Q9BWW4 CMTM3-212ENST00000566121 572 ntTSL 3 BASIC12.69□□□□□ -0.38
SSBP3Q9BWW4 AC008805.2-201ENST00000590069 435 ntTSL 5 BASIC12.69□□□□□ -0.38
SSBP3Q9BWW4 C19orf38-203ENST00000592854 1060 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
SSBP3Q9BWW4 Six3os1_5.1-201ENST00000611000 271 ntBASIC12.69□□□□□ -0.38
SSBP3Q9BWW4 SPATA21-206ENST00000612240 603 ntTSL 5 BASIC12.69□□□□□ -0.38
SSBP3Q9BWW4 AC145423.3-201ENST00000615987 467 ntBASIC12.69□□□□□ -0.38
SSBP3Q9BWW4 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC12.69□□□□□ -0.38
SSBP3Q9BWW4 NTMT1-204ENST00000372486 1487 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
SSBP3Q9BWW4 SEZ6L-209ENST00000529632 6534 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
SSBP3Q9BWW4 UBAC2-202ENST00000376440 2525 ntTSL 2 BASIC12.69□□□□□ -0.38
SSBP3Q9BWW4 FGD5-AS1-202ENST00000424349 3792 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
SSBP3Q9BWW4 AL009178.2-201ENST00000597278 2719 ntBASIC12.69□□□□□ -0.38
SSBP3Q9BWW4 USP36-201ENST00000312010 5234 ntAPPRIS P2 TSL 5 BASIC12.69□□□□□ -0.38
SSBP3Q9BWW4 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC12.69□□□□□ -0.38
SSBP3Q9BWW4 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
SSBP3Q9BWW4 STK33-217ENST00000534493 1895 ntTSL 2 BASIC12.69□□□□□ -0.38
SSBP3Q9BWW4 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
SSBP3Q9BWW4 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
SSBP3Q9BWW4 PODN-202ENST00000371500 3287 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
SSBP3Q9BWW4 PDZD4-201ENST00000164640 3689 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
SSBP3Q9BWW4 TLL1-201ENST00000061240 6708 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
SSBP3Q9BWW4 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
SSBP3Q9BWW4 B4GALNT3-201ENST00000266383 5068 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
SSBP3Q9BWW4 GARS-201ENST00000389266 2634 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
SSBP3Q9BWW4 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
SSBP3Q9BWW4 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC12.69□□□□□ -0.38
SSBP3Q9BWW4 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
SSBP3Q9BWW4 MCL1-202ENST00000369026 3932 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
SSBP3Q9BWW4 CYB561D1-204ENST00000420578 3326 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
SSBP3Q9BWW4 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC12.68□□□□□ -0.38
SSBP3Q9BWW4 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC12.68□□□□□ -0.38
SSBP3Q9BWW4 AC239800.3-201ENST00000424684 5243 ntTSL 5 BASIC12.68□□□□□ -0.38
SSBP3Q9BWW4 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
SSBP3Q9BWW4 LINC01185-202ENST00000452343 1705 ntTSL 2 BASIC12.68□□□□□ -0.38
SSBP3Q9BWW4 OTULIN-201ENST00000284274 7800 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
SSBP3Q9BWW4 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC12.68□□□□□ -0.38
SSBP3Q9BWW4 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
SSBP3Q9BWW4 SEPT8-206ENST00000378706 4168 ntAPPRIS ALT1 TSL 5 BASIC12.68□□□□□ -0.38
SSBP3Q9BWW4 ZNF365-205ENST00000395254 4173 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
SSBP3Q9BWW4 TBC1D2-201ENST00000342112 3046 ntTSL 2 BASIC12.68□□□□□ -0.38
SSBP3Q9BWW4 SLC22A15-202ENST00000369503 4720 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
SSBP3Q9BWW4 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
SSBP3Q9BWW4 CPEB3-201ENST00000265997 4851 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
SSBP3Q9BWW4 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
SSBP3Q9BWW4 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
SSBP3Q9BWW4 FAM118B-210ENST00000627851 1862 ntTSL 5 BASIC12.68□□□□□ -0.38
SSBP3Q9BWW4 ZNF70-201ENST00000341976 6924 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
SSBP3Q9BWW4 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
SSBP3Q9BWW4 CYB561-203ENST00000392976 3151 ntAPPRIS P1 TSL 3 BASIC12.68□□□□□ -0.38
SSBP3Q9BWW4 CAMKK2-201ENST00000324774 5598 ntAPPRIS P4 TSL 1 (best) BASIC12.68□□□□□ -0.38
SSBP3Q9BWW4 LINC02551-202ENST00000533812 2203 ntTSL 5 BASIC12.68□□□□□ -0.38
SSBP3Q9BWW4 LHCGR-202ENST00000401907 1477 ntTSL 5 BASIC12.68□□□□□ -0.38
SSBP3Q9BWW4 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
SSBP3Q9BWW4 BTBD11-204ENST00000420571 3478 ntTSL 5 BASIC12.68□□□□□ -0.38
SSBP3Q9BWW4 JPH4-205ENST00000622501 3489 ntAPPRIS ALT1 TSL 5 BASIC12.68□□□□□ -0.38
SSBP3Q9BWW4 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
SSBP3Q9BWW4 AHNAK-201ENST00000257247 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
SSBP3Q9BWW4 DYNLRB2-201ENST00000305904 497 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
SSBP3Q9BWW4 ANKRD19P-201ENST00000338192 862 ntBASIC12.68□□□□□ -0.38
SSBP3Q9BWW4 AGTRAP-202ENST00000376627 1055 ntTSL 5 BASIC12.68□□□□□ -0.38
SSBP3Q9BWW4 STX1A-203ENST00000395155 783 ntTSL 2 BASIC12.68□□□□□ -0.38
SSBP3Q9BWW4 AL583835.2-202ENST00000421363 1104 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
SSBP3Q9BWW4 HOXB-AS1-201ENST00000435312 806 ntTSL 5 BASIC12.68□□□□□ -0.38
SSBP3Q9BWW4 RPS2P32-201ENST00000439199 892 ntBASIC12.68□□□□□ -0.38
SSBP3Q9BWW4 AC004522.2-201ENST00000456499 680 ntTSL 3 BASIC12.68□□□□□ -0.38
SSBP3Q9BWW4 CDK2AP2-205ENST00000531506 634 ntTSL 2 BASIC12.68□□□□□ -0.38
SSBP3Q9BWW4 AP000808.2-201ENST00000542410 569 ntTSL 4 BASIC12.68□□□□□ -0.38
SSBP3Q9BWW4 KRT90P-201ENST00000549264 1064 ntBASIC12.68□□□□□ -0.38
SSBP3Q9BWW4 AC025279.2-201ENST00000569730 653 ntBASIC12.68□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 42.4 ms