Protein–RNA interactions for Protein: Q99986

VRK1, Serine/threonine-protein kinase VRK1, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1Q99986 PNPLA3-203ENST00000423180 2222 ntTSL 2 BASIC13.49□□□□□ -0.25
VRK1Q99986 AXL-201ENST00000301178 4737 ntAPPRIS P4 TSL 1 (best) BASIC13.49□□□□□ -0.25
VRK1Q99986 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
VRK1Q99986 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
VRK1Q99986 GPANK1-205ENST00000375906 2793 ntAPPRIS P1 TSL 2 BASIC13.49□□□□□ -0.25
VRK1Q99986 CTBP1-AS2-205ENST00000578730 2757 ntTSL 2 BASIC13.49□□□□□ -0.25
VRK1Q99986 NAALADL1-203ENST00000356632 2118 ntTSL 5 BASIC13.49□□□□□ -0.25
VRK1Q99986 LTBP3-221ENST00000532932 3327 ntTSL 2 BASIC13.49□□□□□ -0.25
VRK1Q99986 GAK-201ENST00000314167 4442 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
VRK1Q99986 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
VRK1Q99986 REXO1L1P-202ENST00000608646 1974 ntBASIC13.49□□□□□ -0.25
VRK1Q99986 TJP3-207ENST00000589378 3068 ntAPPRIS ALT2 TSL 2 BASIC13.49□□□□□ -0.25
VRK1Q99986 TRIM41-201ENST00000315073 3637 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
VRK1Q99986 PIK3IP1-201ENST00000215912 2467 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
VRK1Q99986 RIC1-201ENST00000251879 4127 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
VRK1Q99986 AC091951.1-201ENST00000512854 2465 ntBASIC13.49□□□□□ -0.25
VRK1Q99986 MED16-203ENST00000325464 2922 ntAPPRIS P2 TSL 5 BASIC13.49□□□□□ -0.25
VRK1Q99986 CDH23-202ENST00000299366 3954 ntTSL 5 BASIC13.49□□□□□ -0.25
VRK1Q99986 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
VRK1Q99986 EEF1A1-202ENST00000316292 4441 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
VRK1Q99986 TJP3-202ENST00000541714 3350 ntAPPRIS P3 TSL 2 BASIC13.49□□□□□ -0.25
VRK1Q99986 CD164L2-203ENST00000374030 993 ntAPPRIS ALT1 TSL 5 BASIC13.49□□□□□ -0.25
VRK1Q99986 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
VRK1Q99986 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
VRK1Q99986 AL512384.1-201ENST00000406683 331 ntBASIC13.49□□□□□ -0.25
VRK1Q99986 CC2D2B-203ENST00000423344 1241 ntTSL 2 BASIC13.49□□□□□ -0.25
VRK1Q99986 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC13.49□□□□□ -0.25
VRK1Q99986 PRSS48-202ENST00000455694 989 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
VRK1Q99986 PHKG1P2-201ENST00000457537 863 ntBASIC13.49□□□□□ -0.25
VRK1Q99986 GIMAP3P-201ENST00000495150 836 ntBASIC13.49□□□□□ -0.25
VRK1Q99986 GS1-24F4.2-201ENST00000500823 1110 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
VRK1Q99986 IL32-215ENST00000529550 772 ntAPPRIS P4 TSL 3 BASIC13.49□□□□□ -0.25
VRK1Q99986 CSF1R-209ENST00000543093 921 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
VRK1Q99986 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
VRK1Q99986 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC13.49□□□□□ -0.25
VRK1Q99986 AC126696.2-201ENST00000563687 522 ntTSL 3 BASIC13.49□□□□□ -0.25
VRK1Q99986 RARRES2P5-201ENST00000564013 466 ntBASIC13.49□□□□□ -0.25
VRK1Q99986 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC13.49□□□□□ -0.25
VRK1Q99986 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC13.49□□□□□ -0.25
VRK1Q99986 AC132938.2-201ENST00000579188 680 ntBASIC13.49□□□□□ -0.25
VRK1Q99986 AC005253.2-201ENST00000593791 432 ntTSL 3 BASIC13.49□□□□□ -0.25
VRK1Q99986 IER3IP1-202ENST00000639845 832 ntTSL 2 BASIC13.49□□□□□ -0.25
VRK1Q99986 AL591163.1-201ENST00000641757 987 ntBASIC13.49□□□□□ -0.25
VRK1Q99986 AGT-201ENST00000366667 2291 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
VRK1Q99986 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
VRK1Q99986 EID1-201ENST00000530028 2298 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
VRK1Q99986 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
VRK1Q99986 GGA1-206ENST00000406772 3205 ntTSL 2 BASIC13.49□□□□□ -0.25
VRK1Q99986 AC117489.1-201ENST00000625169 3217 ntBASIC13.49□□□□□ -0.25
VRK1Q99986 CYP26A1-202ENST00000371531 2245 ntTSL 2 BASIC13.49□□□□□ -0.25
VRK1Q99986 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
VRK1Q99986 RFC5-204ENST00000454402 1655 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
VRK1Q99986 TMCO3-202ENST00000434316 3050 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
VRK1Q99986 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
VRK1Q99986 ELN-208ENST00000380575 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
VRK1Q99986 PLEKHD1-201ENST00000322564 4865 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
VRK1Q99986 LMX1B-202ENST00000373474 5797 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
VRK1Q99986 C4B-201ENST00000425700 5237 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
VRK1Q99986 EFNB1-201ENST00000204961 3314 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
VRK1Q99986 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
VRK1Q99986 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
VRK1Q99986 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
VRK1Q99986 SPPL3-201ENST00000353487 4148 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
VRK1Q99986 UBQLN1-202ENST00000376395 4118 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
VRK1Q99986 TAF6-205ENST00000437822 2318 ntTSL 2 BASIC13.48□□□□□ -0.25
VRK1Q99986 VEZF1-202ENST00000581208 2321 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
VRK1Q99986 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
VRK1Q99986 SERPINE3-204ENST00000524365 2293 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
VRK1Q99986 OR2C3-201ENST00000366487 8467 ntAPPRIS P1 BASIC13.48□□□□□ -0.25
VRK1Q99986 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC13.48□□□□□ -0.25
VRK1Q99986 MROH1-209ENST00000534366 5092 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
VRK1Q99986 HTR3A-203ENST00000375498 2235 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
VRK1Q99986 RASA3-201ENST00000334062 4191 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
VRK1Q99986 ZNF365-207ENST00000410046 3379 ntTSL 2 BASIC13.48□□□□□ -0.25
VRK1Q99986 RBPMS-201ENST00000287771 2974 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
VRK1Q99986 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC13.48□□□□□ -0.25
VRK1Q99986 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC13.48□□□□□ -0.25
VRK1Q99986 TCOF1-201ENST00000323668 4832 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
VRK1Q99986 ANO6-202ENST00000423947 5504 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
VRK1Q99986 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
VRK1Q99986 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC13.48□□□□□ -0.25
VRK1Q99986 SERP1-201ENST00000239944 3171 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
VRK1Q99986 AZGP1-202ENST00000411734 2027 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
VRK1Q99986 TPO-201ENST00000329066 3138 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
VRK1Q99986 OR8S1-201ENST00000310194 1080 ntBASIC13.48□□□□□ -0.25
VRK1Q99986 MAGEC1-202ENST00000406005 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
VRK1Q99986 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC13.48□□□□□ -0.25
VRK1Q99986 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC13.48□□□□□ -0.25
VRK1Q99986 TARDBPP1-201ENST00000442013 1203 ntBASIC13.48□□□□□ -0.25
VRK1Q99986 NME4-207ENST00000450036 985 ntTSL 3 BASIC13.48□□□□□ -0.25
VRK1Q99986 HOXB3-204ENST00000465120 943 ntTSL 3 BASIC13.48□□□□□ -0.25
VRK1Q99986 NAA50-208ENST00000497255 789 ntTSL 5 BASIC13.48□□□□□ -0.25
VRK1Q99986 DRAP1-208ENST00000532933 751 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
VRK1Q99986 AC005342.2-201ENST00000544163 315 ntTSL 3 BASIC13.48□□□□□ -0.25
VRK1Q99986 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC13.48□□□□□ -0.25
VRK1Q99986 RRP7BP-205ENST00000566851 833 ntBASIC13.48□□□□□ -0.25
VRK1Q99986 AC036164.1-201ENST00000570544 333 ntBASIC13.48□□□□□ -0.25
VRK1Q99986 UBE2E3-205ENST00000602475 602 ntTSL 3 BASIC13.48□□□□□ -0.25
VRK1Q99986 AL450472.2-201ENST00000603663 1156 ntBASIC13.48□□□□□ -0.25
VRK1Q99986 AC099568.2-201ENST00000609194 695 ntBASIC13.48□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 53 ms