Protein–RNA interactions for Protein: Q96RK4

BBS4, Bardet-Biedl syndrome 4 protein, humanhuman

Predictions only

Length 519 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BBS4Q96RK4 AKT1S1-205ENST00000391833 3640 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
BBS4Q96RK4 GPKOW-201ENST00000156109 1742 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
BBS4Q96RK4 ASIC4-202ENST00000358078 2741 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
BBS4Q96RK4 ZNF586-201ENST00000391702 2265 ntTSL 2 BASIC14.42□□□□□ -0.1
BBS4Q96RK4 ZNF575-202ENST00000458714 2285 ntTSL 2 BASIC14.42□□□□□ -0.1
BBS4Q96RK4 CMA1-201ENST00000206446 633 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
BBS4Q96RK4 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
BBS4Q96RK4 TAGLN-202ENST00000392951 928 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
BBS4Q96RK4 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC14.42□□□□□ -0.1
BBS4Q96RK4 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC14.42□□□□□ -0.1
BBS4Q96RK4 AC134915.1-201ENST00000426461 574 ntBASIC14.42□□□□□ -0.1
BBS4Q96RK4 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
BBS4Q96RK4 SERBP1P5-201ENST00000510079 1181 ntBASIC14.42□□□□□ -0.1
BBS4Q96RK4 CPLX2-206ENST00000512824 518 ntTSL 4 BASIC14.42□□□□□ -0.1
BBS4Q96RK4 IL32-215ENST00000529550 772 ntAPPRIS P4 TSL 3 BASIC14.42□□□□□ -0.1
BBS4Q96RK4 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC14.42□□□□□ -0.1
BBS4Q96RK4 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC14.42□□□□□ -0.1
BBS4Q96RK4 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC14.42□□□□□ -0.1
BBS4Q96RK4 LYSMD2-204ENST00000560491 1026 ntTSL 3 BASIC14.42□□□□□ -0.1
BBS4Q96RK4 YIF1B-214ENST00000591784 940 ntTSL 5 BASIC14.42□□□□□ -0.1
BBS4Q96RK4 AC093813.1-201ENST00000605066 256 ntBASIC14.42□□□□□ -0.1
BBS4Q96RK4 PDCD6-212ENST00000614778 1050 ntTSL 2 BASIC14.42□□□□□ -0.1
BBS4Q96RK4 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC14.42□□□□□ -0.1
BBS4Q96RK4 C16orf52-202ENST00000542527 4360 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
BBS4Q96RK4 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
BBS4Q96RK4 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
BBS4Q96RK4 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC14.42□□□□□ -0.1
BBS4Q96RK4 SEMA4F-202ENST00000357877 4312 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
BBS4Q96RK4 IL12RB2-206ENST00000544434 3782 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
BBS4Q96RK4 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
BBS4Q96RK4 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
BBS4Q96RK4 SLC9A7P1-202ENST00000556476 2239 ntBASIC14.42□□□□□ -0.1
BBS4Q96RK4 HYAL1-209ENST00000618175 2225 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
BBS4Q96RK4 NTRK3-203ENST00000357724 2980 ntTSL 5 BASIC14.42□□□□□ -0.1
BBS4Q96RK4 RBM46-204ENST00000514866 2315 ntTSL 2 BASIC14.42□□□□□ -0.1
BBS4Q96RK4 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
BBS4Q96RK4 ZNF541-203ENST00000391901 4580 ntAPPRIS P2 TSL 5 BASIC14.42□□□□□ -0.1
BBS4Q96RK4 PEX26-205ENST00000610387 3924 ntTSL 5 BASIC14.42□□□□□ -0.1
BBS4Q96RK4 TERF1-201ENST00000276602 3268 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
BBS4Q96RK4 PCDHB8-201ENST00000239444 2740 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
BBS4Q96RK4 GRB7-203ENST00000394209 1955 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
BBS4Q96RK4 SOWAHA-201ENST00000378693 3211 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
BBS4Q96RK4 TSEN2-201ENST00000284995 2381 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
BBS4Q96RK4 NCK2-203ENST00000393349 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
BBS4Q96RK4 PA2G4-201ENST00000303305 2577 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
BBS4Q96RK4 GLG1-203ENST00000447066 3626 ntAPPRIS ALT2 TSL 2 BASIC14.41□□□□□ -0.1
BBS4Q96RK4 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC14.41□□□□□ -0.1
BBS4Q96RK4 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC14.41□□□□□ -0.1
BBS4Q96RK4 KIAA1211L-201ENST00000397899 3907 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
BBS4Q96RK4 AKAP12-204ENST00000402676 8432 ntAPPRIS P4 TSL 5 BASIC14.41□□□□□ -0.1
BBS4Q96RK4 ATG4B-205ENST00000404914 2878 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
BBS4Q96RK4 MRPS17-201ENST00000285298 1845 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
BBS4Q96RK4 AC007743.1-201ENST00000596663 3075 ntTSL 2 BASIC14.41□□□□□ -0.1
BBS4Q96RK4 ANK1-202ENST00000289734 8297 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
BBS4Q96RK4 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC14.41□□□□□ -0.1
BBS4Q96RK4 ATP6V1H-202ENST00000359530 2007 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
BBS4Q96RK4 PLXNB3-209ENST00000538966 6377 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
BBS4Q96RK4 INTS4P1-203ENST00000641008 3683 ntBASIC14.41□□□□□ -0.1
BBS4Q96RK4 TBCD-202ENST00000539345 3975 ntTSL 5 BASIC14.41□□□□□ -0.1
BBS4Q96RK4 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
BBS4Q96RK4 GAK-214ENST00000511163 4280 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
BBS4Q96RK4 AC015712.6-201ENST00000431060 5068 ntTSL 2 BASIC14.41□□□□□ -0.1
BBS4Q96RK4 KIAA1217-203ENST00000376452 6052 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
BBS4Q96RK4 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
BBS4Q96RK4 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
BBS4Q96RK4 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
BBS4Q96RK4 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC14.41□□□□□ -0.1
BBS4Q96RK4 MORN4-202ENST00000370635 419 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
BBS4Q96RK4 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
BBS4Q96RK4 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
BBS4Q96RK4 DFFBP1-201ENST00000433250 979 ntBASIC14.41□□□□□ -0.1
BBS4Q96RK4 SPTLC1P1-201ENST00000447199 261 ntBASIC14.41□□□□□ -0.1
BBS4Q96RK4 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC14.41□□□□□ -0.1
BBS4Q96RK4 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC14.41□□□□□ -0.1
BBS4Q96RK4 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC14.41□□□□□ -0.1
BBS4Q96RK4 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC14.41□□□□□ -0.1
BBS4Q96RK4 CDK2AP2-205ENST00000531506 634 ntTSL 2 BASIC14.41□□□□□ -0.1
BBS4Q96RK4 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC14.41□□□□□ -0.1
BBS4Q96RK4 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC14.41□□□□□ -0.1
BBS4Q96RK4 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC14.41□□□□□ -0.1
BBS4Q96RK4 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC14.41□□□□□ -0.1
BBS4Q96RK4 AC005785.1-202ENST00000597164 237 ntTSL 3 BASIC14.41□□□□□ -0.1
BBS4Q96RK4 AC093726.1-201ENST00000608064 963 ntBASIC14.41□□□□□ -0.1
BBS4Q96RK4 AC099568.2-201ENST00000609194 695 ntBASIC14.41□□□□□ -0.1
BBS4Q96RK4 AL662799.1-202ENST00000614205 422 ntBASIC14.41□□□□□ -0.1
BBS4Q96RK4 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
BBS4Q96RK4 LILRP1-201ENST00000444199 1370 ntBASIC14.41□□□□□ -0.1
BBS4Q96RK4 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
BBS4Q96RK4 TBP-207ENST00000616883 1750 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
BBS4Q96RK4 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
BBS4Q96RK4 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC14.41□□□□□ -0.1
BBS4Q96RK4 VWA2-202ENST00000392982 2794 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
BBS4Q96RK4 TAS1R1-201ENST00000333172 2892 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
BBS4Q96RK4 PVR-203ENST00000403059 3078 ntAPPRIS ALT2 TSL 2 BASIC14.41□□□□□ -0.1
BBS4Q96RK4 SYNGR1-203ENST00000328933 4391 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
BBS4Q96RK4 ZC3HAV1-203ENST00000464606 4776 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
BBS4Q96RK4 TRPM1-203ENST00000542188 6004 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
BBS4Q96RK4 RDX-218ENST00000544551 4117 ntTSL 2 BASIC14.41□□□□□ -0.1
BBS4Q96RK4 FXYD6-201ENST00000260282 1929 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
BBS4Q96RK4 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 47.2 ms