Protein–RNA interactions for Protein: Q93050

ATP6V0A1, V-type proton ATPase 116 kDa subunit a isoform 1, humanhuman

Predictions only

Length 837 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6V0A1Q93050 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
ATP6V0A1Q93050 DIS3-202ENST00000377780 5232 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
ATP6V0A1Q93050 PGBD5-201ENST00000391860 10961 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
ATP6V0A1Q93050 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
ATP6V0A1Q93050 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
ATP6V0A1Q93050 LMAN1-201ENST00000251047 5521 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
ATP6V0A1Q93050 SLC5A10-202ENST00000395643 1982 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
ATP6V0A1Q93050 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
ATP6V0A1Q93050 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
ATP6V0A1Q93050 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
ATP6V0A1Q93050 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
ATP6V0A1Q93050 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
ATP6V0A1Q93050 WDR3-202ENST00000369441 1035 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
ATP6V0A1Q93050 LMO4-201ENST00000370542 1260 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
ATP6V0A1Q93050 PSTK-202ENST00000405485 1047 ntAPPRIS P2 TSL 2 BASIC16.9■□□□□ 0.3
ATP6V0A1Q93050 PRKG1-AS1-201ENST00000420193 971 ntTSL 3 BASIC16.9■□□□□ 0.3
ATP6V0A1Q93050 LINC01840-201ENST00000421870 571 ntTSL 4 BASIC16.9■□□□□ 0.3
ATP6V0A1Q93050 AL450003.2-201ENST00000450445 428 ntTSL 5 BASIC16.9■□□□□ 0.3
ATP6V0A1Q93050 PRPS2-205ENST00000489404 763 ntTSL 2 BASIC16.9■□□□□ 0.3
ATP6V0A1Q93050 MAP1LC3B2-202ENST00000556529 660 ntAPPRIS P1 TSL 3 BASIC16.9■□□□□ 0.3
ATP6V0A1Q93050 SLC35G4-201ENST00000588001 1017 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
ATP6V0A1Q93050 RBM8A-206ENST00000632555 751 ntAPPRIS P1 TSL 3 BASIC16.9■□□□□ 0.3
ATP6V0A1Q93050 AC044839.1-204ENST00000634777 1058 ntTSL 5 BASIC16.9■□□□□ 0.3
ATP6V0A1Q93050 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
ATP6V0A1Q93050 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
ATP6V0A1Q93050 KIF22-208ENST00000569382 2020 ntTSL 5 BASIC16.9■□□□□ 0.3
ATP6V0A1Q93050 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC16.9■□□□□ 0.3
ATP6V0A1Q93050 RHD-204ENST00000417538 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
ATP6V0A1Q93050 CNST-203ENST00000366513 5126 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
ATP6V0A1Q93050 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
ATP6V0A1Q93050 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
ATP6V0A1Q93050 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
ATP6V0A1Q93050 FUK-207ENST00000571514 3054 ntTSL 2 BASIC16.9■□□□□ 0.3
ATP6V0A1Q93050 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
ATP6V0A1Q93050 HSFX2-201ENST00000598963 1365 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
ATP6V0A1Q93050 MAP7-207ENST00000616617 4326 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.3
ATP6V0A1Q93050 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.3
ATP6V0A1Q93050 PCBP2-202ENST00000359462 1814 ntAPPRIS ALT1 TSL 1 (best) BASIC16.89■□□□□ 0.29
ATP6V0A1Q93050 ANKRD30BP2-201ENST00000435744 1610 ntBASIC16.89■□□□□ 0.29
ATP6V0A1Q93050 GNAQ-201ENST00000286548 6539 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
ATP6V0A1Q93050 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC16.89■□□□□ 0.29
ATP6V0A1Q93050 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC16.89■□□□□ 0.29
ATP6V0A1Q93050 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC16.89■□□□□ 0.29
ATP6V0A1Q93050 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
ATP6V0A1Q93050 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
ATP6V0A1Q93050 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC16.89■□□□□ 0.29
ATP6V0A1Q93050 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
ATP6V0A1Q93050 GAL-201ENST00000265643 818 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
ATP6V0A1Q93050 TEX13B-201ENST00000302917 1248 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
ATP6V0A1Q93050 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
ATP6V0A1Q93050 PRTFDC1-203ENST00000376378 747 ntTSL 2 BASIC16.89■□□□□ 0.29
ATP6V0A1Q93050 C9orf24-203ENST00000379126 496 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
ATP6V0A1Q93050 AL450469.1-201ENST00000418953 461 ntTSL 2 BASIC16.89■□□□□ 0.29
ATP6V0A1Q93050 AL589986.1-201ENST00000429230 789 ntTSL 5 BASIC16.89■□□□□ 0.29
ATP6V0A1Q93050 VGLL4-214ENST00000451674 938 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
ATP6V0A1Q93050 APOA2-204ENST00000464492 530 ntTSL 3 BASIC16.89■□□□□ 0.29
ATP6V0A1Q93050 RWDD1-202ENST00000466444 5522 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
ATP6V0A1Q93050 DERL3-208ENST00000476077 969 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
ATP6V0A1Q93050 COX5BP1-201ENST00000507622 393 ntBASIC16.89■□□□□ 0.29
ATP6V0A1Q93050 GTF2H2-204ENST00000517900 659 ntTSL 5 BASIC16.89■□□□□ 0.29
ATP6V0A1Q93050 FBXL8-208ENST00000521920 574 ntTSL 4 BASIC16.89■□□□□ 0.29
ATP6V0A1Q93050 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC16.89■□□□□ 0.29
ATP6V0A1Q93050 ELMSAN1-201ENST00000286523 8091 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
ATP6V0A1Q93050 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
ATP6V0A1Q93050 AC073347.1-201ENST00000421633 2643 ntBASIC16.89■□□□□ 0.29
ATP6V0A1Q93050 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
ATP6V0A1Q93050 HTR4-209ENST00000521530 1323 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
ATP6V0A1Q93050 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
ATP6V0A1Q93050 ZMYND10-202ENST00000360165 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC16.89■□□□□ 0.29
ATP6V0A1Q93050 HEMK1-201ENST00000232854 6087 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
ATP6V0A1Q93050 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
ATP6V0A1Q93050 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
ATP6V0A1Q93050 HGNC:18790-203ENST00000433139 2254 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
ATP6V0A1Q93050 MPP1-204ENST00000393531 1389 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
ATP6V0A1Q93050 APBB1-219ENST00000608704 2095 ntTSL 5 BASIC16.89■□□□□ 0.29
ATP6V0A1Q93050 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
ATP6V0A1Q93050 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
ATP6V0A1Q93050 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC16.88■□□□□ 0.29
ATP6V0A1Q93050 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
ATP6V0A1Q93050 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
ATP6V0A1Q93050 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
ATP6V0A1Q93050 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
ATP6V0A1Q93050 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC16.88■□□□□ 0.29
ATP6V0A1Q93050 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
ATP6V0A1Q93050 ARRB2-204ENST00000412477 1779 ntTSL 2 BASIC16.88■□□□□ 0.29
ATP6V0A1Q93050 UBXN1-202ENST00000301935 1153 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
ATP6V0A1Q93050 IP6K2-202ENST00000340879 1185 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
ATP6V0A1Q93050 MIR663B-201ENST00000408361 115 ntBASIC16.88■□□□□ 0.29
ATP6V0A1Q93050 SAP30L-202ENST00000426761 777 ntTSL 3 BASIC16.88■□□□□ 0.29
ATP6V0A1Q93050 ADAMTSL1-210ENST00000431052 824 ntTSL 2 BASIC16.88■□□□□ 0.29
ATP6V0A1Q93050 LINC01762-204ENST00000434879 436 ntTSL 2 BASIC16.88■□□□□ 0.29
ATP6V0A1Q93050 PTPA-218ENST00000435132 618 ntTSL 2 BASIC16.88■□□□□ 0.29
ATP6V0A1Q93050 FGF13-204ENST00000436198 1165 ntTSL 2 BASIC16.88■□□□□ 0.29
ATP6V0A1Q93050 AKR7A2P1-201ENST00000460134 915 ntBASIC16.88■□□□□ 0.29
ATP6V0A1Q93050 GDNF-AS1-201ENST00000503382 604 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
ATP6V0A1Q93050 FTLP10-202ENST00000505798 471 ntBASIC16.88■□□□□ 0.29
ATP6V0A1Q93050 TMEM219-203ENST00000561899 1249 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
ATP6V0A1Q93050 NIP7-208ENST00000569637 1099 ntTSL 2 BASIC16.88■□□□□ 0.29
ATP6V0A1Q93050 TXNDC17-202ENST00000570330 459 ntTSL 2 BASIC16.88■□□□□ 0.29
ATP6V0A1Q93050 GLIS2-AS1-201ENST00000576080 340 ntTSL 2 BASIC16.88■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 76.6 ms