Protein–RNA interactions for Protein: Q8WV48

CCDC107, Coiled-coil domain-containing protein 107, humanhuman

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC107Q8WV48 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC13.2□□□□□ -0.3
CCDC107Q8WV48 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC13.2□□□□□ -0.3
CCDC107Q8WV48 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC13.2□□□□□ -0.3
CCDC107Q8WV48 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC13.2□□□□□ -0.3
CCDC107Q8WV48 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
CCDC107Q8WV48 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC13.2□□□□□ -0.3
CCDC107Q8WV48 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC13.2□□□□□ -0.3
CCDC107Q8WV48 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC13.2□□□□□ -0.3
CCDC107Q8WV48 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC13.2□□□□□ -0.3
CCDC107Q8WV48 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC13.2□□□□□ -0.3
CCDC107Q8WV48 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC13.2□□□□□ -0.3
CCDC107Q8WV48 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CCDC107Q8WV48 AC018529.1-201ENST00000613063 361 ntBASIC13.2□□□□□ -0.3
CCDC107Q8WV48 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC13.2□□□□□ -0.3
CCDC107Q8WV48 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
CCDC107Q8WV48 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC13.2□□□□□ -0.3
CCDC107Q8WV48 TJP2-208ENST00000535702 3984 ntAPPRIS ALT2 TSL 2 BASIC13.2□□□□□ -0.3
CCDC107Q8WV48 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
CCDC107Q8WV48 ACSM1-201ENST00000307493 2051 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CCDC107Q8WV48 RILPL1-202ENST00000376874 3932 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CCDC107Q8WV48 SGK2-201ENST00000341458 2498 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
CCDC107Q8WV48 SYNGAP1-208ENST00000629380 9862 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
CCDC107Q8WV48 NMUR1-201ENST00000305141 3298 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CCDC107Q8WV48 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
CCDC107Q8WV48 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC13.2□□□□□ -0.3
CCDC107Q8WV48 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
CCDC107Q8WV48 ADAM15-206ENST00000368412 2804 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
CCDC107Q8WV48 CYB561-201ENST00000360793 3001 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CCDC107Q8WV48 ACAP2-201ENST00000326793 7160 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CCDC107Q8WV48 CDK17-201ENST00000261211 4157 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CCDC107Q8WV48 SLC25A35-201ENST00000380067 2785 ntTSL 2 BASIC13.2□□□□□ -0.3
CCDC107Q8WV48 RET-205ENST00000615310 4337 ntTSL 5 BASIC13.2□□□□□ -0.3
CCDC107Q8WV48 XPR1-201ENST00000367589 4126 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
CCDC107Q8WV48 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CCDC107Q8WV48 FLNC-202ENST00000346177 9042 ntAPPRIS ALT1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CCDC107Q8WV48 GRIK5-201ENST00000262895 3493 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CCDC107Q8WV48 STC1-202ENST00000524323 1748 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
CCDC107Q8WV48 GAS2L2-203ENST00000618498 2655 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
CCDC107Q8WV48 SOAT1-204ENST00000540564 6861 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
CCDC107Q8WV48 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
CCDC107Q8WV48 TPD52L2-206ENST00000358548 2275 ntTSL 2 BASIC13.19□□□□□ -0.3
CCDC107Q8WV48 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
CCDC107Q8WV48 NOL9-201ENST00000377705 6649 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CCDC107Q8WV48 SCNN1D-205ENST00000379116 3044 ntAPPRIS P2 TSL 5 BASIC13.19□□□□□ -0.3
CCDC107Q8WV48 SGTB-201ENST00000381007 5469 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CCDC107Q8WV48 ZMIZ2-206ENST00000441627 5089 ntAPPRIS P4 TSL 1 (best) BASIC13.19□□□□□ -0.3
CCDC107Q8WV48 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
CCDC107Q8WV48 ERLIN2-205ENST00000518586 2623 ntTSL 2 BASIC13.19□□□□□ -0.3
CCDC107Q8WV48 INO80-202ENST00000401393 5991 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CCDC107Q8WV48 KIAA1257-204ENST00000511438 2408 ntAPPRIS ALT2 TSL 2 BASIC13.19□□□□□ -0.3
CCDC107Q8WV48 FARS2-202ENST00000324331 1692 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CCDC107Q8WV48 AFF3-201ENST00000317233 8135 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
CCDC107Q8WV48 EGOT-201ENST00000414938 1464 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
CCDC107Q8WV48 UGT3A2-201ENST00000282507 2355 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CCDC107Q8WV48 ADI1-201ENST00000327435 2391 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CCDC107Q8WV48 PASK-204ENST00000405260 4942 ntAPPRIS P3 TSL 5 BASIC13.19□□□□□ -0.3
CCDC107Q8WV48 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CCDC107Q8WV48 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CCDC107Q8WV48 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC13.19□□□□□ -0.3
CCDC107Q8WV48 AL627223.1-201ENST00000416693 442 ntBASIC13.19□□□□□ -0.3
CCDC107Q8WV48 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC13.19□□□□□ -0.3
CCDC107Q8WV48 MTND6P24-201ENST00000440466 518 ntBASIC13.19□□□□□ -0.3
CCDC107Q8WV48 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC13.19□□□□□ -0.3
CCDC107Q8WV48 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC13.19□□□□□ -0.3
CCDC107Q8WV48 FXR1-221ENST00000491674 365 ntTSL 2 BASIC13.19□□□□□ -0.3
CCDC107Q8WV48 AC112482.1-201ENST00000492080 688 ntBASIC13.19□□□□□ -0.3
CCDC107Q8WV48 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC13.19□□□□□ -0.3
CCDC107Q8WV48 AC093520.2-201ENST00000561830 333 ntBASIC13.19□□□□□ -0.3
CCDC107Q8WV48 AC105021.1-202ENST00000570572 669 ntBASIC13.19□□□□□ -0.3
CCDC107Q8WV48 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC13.19□□□□□ -0.3
CCDC107Q8WV48 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC13.19□□□□□ -0.3
CCDC107Q8WV48 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC13.19□□□□□ -0.3
CCDC107Q8WV48 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
CCDC107Q8WV48 AL513210.1-201ENST00000629608 234 ntBASIC13.19□□□□□ -0.3
CCDC107Q8WV48 PHTF1-204ENST00000369604 3273 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
CCDC107Q8WV48 LINC00163-201ENST00000434081 2155 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
CCDC107Q8WV48 MYO16-202ENST00000356711 6874 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
CCDC107Q8WV48 HNRNPLL-205ENST00000409636 3980 ntTSL 2 BASIC13.19□□□□□ -0.3
CCDC107Q8WV48 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
CCDC107Q8WV48 PCDHGB8P-201ENST00000502926 1973 ntBASIC13.19□□□□□ -0.3
CCDC107Q8WV48 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
CCDC107Q8WV48 CYP1B1-AS1-201ENST00000413828 1781 ntTSL 5 BASIC13.19□□□□□ -0.3
CCDC107Q8WV48 MAP3K11-208ENST00000530153 2830 ntTSL 2 BASIC13.19□□□□□ -0.3
CCDC107Q8WV48 TMBIM4-202ENST00000358230 2952 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CCDC107Q8WV48 AL607033.1-201ENST00000623900 1599 ntBASIC13.19□□□□□ -0.3
CCDC107Q8WV48 DNM1-212ENST00000627543 4734 ntAPPRIS ALT1 TSL 5 BASIC13.19□□□□□ -0.3
CCDC107Q8WV48 BTRC-203ENST00000393441 6084 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
CCDC107Q8WV48 P4HA1-205ENST00000440381 2790 ntTSL 3 BASIC13.19□□□□□ -0.3
CCDC107Q8WV48 HIC2-203ENST00000443632 6940 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CCDC107Q8WV48 HOXC11-202ENST00000546378 3261 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CCDC107Q8WV48 CAMKK2-209ENST00000446440 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
CCDC107Q8WV48 FBXL16-201ENST00000324361 3411 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CCDC107Q8WV48 SPAST-201ENST00000315285 5117 ntAPPRIS P4 TSL 1 (best) BASIC13.19□□□□□ -0.3
CCDC107Q8WV48 FUK-202ENST00000378912 3925 ntTSL 2 BASIC13.19□□□□□ -0.3
CCDC107Q8WV48 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CCDC107Q8WV48 AC244021.1-201ENST00000417218 3662 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
CCDC107Q8WV48 PLEKHN1-202ENST00000379409 2455 ntAPPRIS ALT2 TSL 2 BASIC13.18□□□□□ -0.3
CCDC107Q8WV48 AC011462.1-202ENST00000540732 1960 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
CCDC107Q8WV48 FAM198B-201ENST00000296530 4985 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CCDC107Q8WV48 WDR66-201ENST00000288912 4467 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 39.7 ms