Protein–RNA interactions for Protein: Q86VH4

LRRTM4, Leucine-rich repeat transmembrane neuronal protein 4, humanhuman

Predictions only

Length 590 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM4Q86VH4 SFTA3-204ENST00000518529 1531 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
LRRTM4Q86VH4 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
LRRTM4Q86VH4 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
LRRTM4Q86VH4 PTPN20-206ENST00000395722 1995 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
LRRTM4Q86VH4 MCFD2-201ENST00000319466 4182 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
LRRTM4Q86VH4 AURKC-203ENST00000448930 1318 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
LRRTM4Q86VH4 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
LRRTM4Q86VH4 SLC26A1-202ENST00000398516 3109 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
LRRTM4Q86VH4 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC14.85□□□□□ -0.03
LRRTM4Q86VH4 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
LRRTM4Q86VH4 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC14.85□□□□□ -0.03
LRRTM4Q86VH4 PCDHB13-201ENST00000341948 5061 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
LRRTM4Q86VH4 MEIOC-201ENST00000409122 4604 ntAPPRIS P2 TSL 5 BASIC14.85□□□□□ -0.03
LRRTM4Q86VH4 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
LRRTM4Q86VH4 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC14.84□□□□□ -0.03
LRRTM4Q86VH4 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC14.84□□□□□ -0.03
LRRTM4Q86VH4 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC14.84□□□□□ -0.03
LRRTM4Q86VH4 MYO3A-201ENST00000265944 5581 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
LRRTM4Q86VH4 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
LRRTM4Q86VH4 LEF1-216ENST00000510624 1472 ntTSL 2 BASIC14.84□□□□□ -0.03
LRRTM4Q86VH4 SLC5A10-202ENST00000395643 1982 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
LRRTM4Q86VH4 AC023824.1-201ENST00000562945 2975 ntBASIC14.84□□□□□ -0.03
LRRTM4Q86VH4 MIR600HG-201ENST00000449175 5984 ntBASIC14.84□□□□□ -0.03
LRRTM4Q86VH4 HID1-202ENST00000425042 3271 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
LRRTM4Q86VH4 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
LRRTM4Q86VH4 GAL-201ENST00000265643 818 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
LRRTM4Q86VH4 CARTPT-201ENST00000296777 915 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
LRRTM4Q86VH4 MORN2-204ENST00000409665 648 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
LRRTM4Q86VH4 AC017104.1-201ENST00000415129 720 ntTSL 3 BASIC14.84□□□□□ -0.03
LRRTM4Q86VH4 AL450998.2-201ENST00000418525 639 ntTSL 3 BASIC14.84□□□□□ -0.03
LRRTM4Q86VH4 FAM21FP-201ENST00000426241 1131 ntBASIC14.84□□□□□ -0.03
LRRTM4Q86VH4 FAM8A4P-201ENST00000435433 1213 ntBASIC14.84□□□□□ -0.03
LRRTM4Q86VH4 RPS2P32-201ENST00000439199 892 ntBASIC14.84□□□□□ -0.03
LRRTM4Q86VH4 ZNF589-204ENST00000440261 917 ntTSL 2 BASIC14.84□□□□□ -0.03
LRRTM4Q86VH4 YBX1P6-201ENST00000442962 1002 ntBASIC14.84□□□□□ -0.03
LRRTM4Q86VH4 AC113608.2-201ENST00000448379 487 ntTSL 3 BASIC14.84□□□□□ -0.03
LRRTM4Q86VH4 BNIP3P42-201ENST00000454982 569 ntBASIC14.84□□□□□ -0.03
LRRTM4Q86VH4 AP003385.5-201ENST00000533876 555 ntTSL 4 BASIC14.84□□□□□ -0.03
LRRTM4Q86VH4 ANAPC15-208ENST00000538393 867 ntAPPRIS P3 TSL 2 BASIC14.84□□□□□ -0.03
LRRTM4Q86VH4 LINC02279-201ENST00000553435 737 ntTSL 5 BASIC14.84□□□□□ -0.03
LRRTM4Q86VH4 IFI27L1-210ENST00000556381 804 ntTSL 5 BASIC14.84□□□□□ -0.03
LRRTM4Q86VH4 GLIS2-AS1-201ENST00000576080 340 ntTSL 2 BASIC14.84□□□□□ -0.03
LRRTM4Q86VH4 BNIP3P29-201ENST00000598302 571 ntBASIC14.84□□□□□ -0.03
LRRTM4Q86VH4 AC004466.1-201ENST00000599515 1080 ntBASIC14.84□□□□□ -0.03
LRRTM4Q86VH4 AC011447.5-201ENST00000616168 564 ntBASIC14.84□□□□□ -0.03
LRRTM4Q86VH4 AC044839.1-204ENST00000634777 1058 ntTSL 5 BASIC14.84□□□□□ -0.03
LRRTM4Q86VH4 JMJD1C-202ENST00000399262 8666 ntAPPRIS P3 TSL 5 BASIC14.84□□□□□ -0.03
LRRTM4Q86VH4 ZBTB37-203ENST00000367704 2323 ntTSL 2 BASIC14.84□□□□□ -0.03
LRRTM4Q86VH4 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC14.84□□□□□ -0.03
LRRTM4Q86VH4 DDIAS-203ENST00000525361 1830 ntAPPRIS ALT2 TSL 2 BASIC14.84□□□□□ -0.03
LRRTM4Q86VH4 AC099850.1-201ENST00000451775 1338 ntTSL 2 BASIC14.84□□□□□ -0.03
LRRTM4Q86VH4 HTR4-209ENST00000521530 1323 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
LRRTM4Q86VH4 B4GALNT3-201ENST00000266383 5068 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
LRRTM4Q86VH4 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
LRRTM4Q86VH4 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
LRRTM4Q86VH4 FAM172A-206ENST00000509163 1369 ntTSL 2 BASIC14.84□□□□□ -0.03
LRRTM4Q86VH4 HTR3A-203ENST00000375498 2235 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
LRRTM4Q86VH4 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC14.83□□□□□ -0.03
LRRTM4Q86VH4 MIF4GD-208ENST00000579297 1419 ntTSL 2 BASIC14.83□□□□□ -0.03
LRRTM4Q86VH4 ACOT7-210ENST00000608083 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.03
LRRTM4Q86VH4 PCDH19-202ENST00000373034 9756 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.03
LRRTM4Q86VH4 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC14.83□□□□□ -0.03
LRRTM4Q86VH4 LRRC6-205ENST00000519595 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC14.83□□□□□ -0.03
LRRTM4Q86VH4 OSBP2-201ENST00000332585 4340 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.03
LRRTM4Q86VH4 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.03
LRRTM4Q86VH4 RPP40-202ENST00000380051 1483 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.03
LRRTM4Q86VH4 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.03
LRRTM4Q86VH4 PTPN5-204ENST00000396170 3871 ntTSL 2 BASIC14.83□□□□□ -0.03
LRRTM4Q86VH4 HMGA2-210ENST00000541363 8094 ntAPPRIS ALT1 TSL 1 (best) BASIC14.83□□□□□ -0.03
LRRTM4Q86VH4 ITPRIPL2-201ENST00000381440 7247 ntAPPRIS P1 BASIC14.83□□□□□ -0.04
LRRTM4Q86VH4 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
LRRTM4Q86VH4 GRIK5-204ENST00000593562 3308 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
LRRTM4Q86VH4 AC104640.1-201ENST00000562617 2109 ntBASIC14.83□□□□□ -0.04
LRRTM4Q86VH4 ZNF286A-218ENST00000583566 1806 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
LRRTM4Q86VH4 CCAR2-202ENST00000389279 3980 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
LRRTM4Q86VH4 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
LRRTM4Q86VH4 PAK6-203ENST00000542403 2540 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
LRRTM4Q86VH4 COPS7B-224ENST00000620578 2500 ntTSL 2 BASIC14.83□□□□□ -0.04
LRRTM4Q86VH4 KIAA1211-206ENST00000541073 4117 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
LRRTM4Q86VH4 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC14.83□□□□□ -0.04
LRRTM4Q86VH4 ZNF746-201ENST00000340622 3806 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
LRRTM4Q86VH4 AGTRAP-202ENST00000376627 1055 ntTSL 5 BASIC14.83□□□□□ -0.04
LRRTM4Q86VH4 C15orf48-202ENST00000396650 732 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
LRRTM4Q86VH4 SGK2-207ENST00000426287 1182 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
LRRTM4Q86VH4 ADAMTSL1-210ENST00000431052 824 ntTSL 2 BASIC14.83□□□□□ -0.04
LRRTM4Q86VH4 LRRC74B-201ENST00000442047 1179 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
LRRTM4Q86VH4 SYNPR-202ENST00000450542 1004 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
LRRTM4Q86VH4 STAG3L5P-205ENST00000473757 1255 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
LRRTM4Q86VH4 MESTP3-201ENST00000503460 968 ntBASIC14.83□□□□□ -0.04
LRRTM4Q86VH4 FTLP10-202ENST00000505798 471 ntBASIC14.83□□□□□ -0.04
LRRTM4Q86VH4 AC090099.4-201ENST00000527671 1027 ntTSL 5 BASIC14.83□□□□□ -0.04
LRRTM4Q86VH4 ZNF720-210ENST00000534369 791 ntTSL 3 BASIC14.83□□□□□ -0.04
LRRTM4Q86VH4 AC005865.1-202ENST00000543036 641 ntTSL 2 BASIC14.83□□□□□ -0.04
LRRTM4Q86VH4 SPECC1-223ENST00000584527 940 ntTSL 3 BASIC14.83□□□□□ -0.04
LRRTM4Q86VH4 AC008750.3-201ENST00000601148 437 ntTSL 5 BASIC14.83□□□□□ -0.04
LRRTM4Q86VH4 AC138466.3-201ENST00000619983 221 ntBASIC14.83□□□□□ -0.04
LRRTM4Q86VH4 LINC01002-220ENST00000632790 449 ntTSL 5 BASIC14.83□□□□□ -0.04
LRRTM4Q86VH4 AL391650.2-201ENST00000640097 941 ntTSL 5 BASIC14.83□□□□□ -0.04
LRRTM4Q86VH4 TNFRSF14-AS1-201ENST00000416860 3522 ntTSL 2 BASIC14.83□□□□□ -0.04
LRRTM4Q86VH4 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms